BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007466
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyra...   143   3e-32
ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Rici...   143   4e-32
ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   136   3e-30
ref|NP_195908.1| E3 ubiquitin-protein ligase UPL4 [Arabidopsis t...   132   6e-29
ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   129   4e-28

>ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyrata subsp. lyrata]
           gi|297316834|gb|EFH47256.1| ubiquitin-protein ligase 4
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1509

 Score =  143 bits (361), Expect = 3e-32
 Identities = 86/214 (40%), Positives = 117/214 (54%), Gaps = 28/214 (13%)
 Frame = +2

Query: 122 DRGRKRSEAGDHLPADKRPCSSSDFHPGTS--------------------------SSEP 223
           +RG+KR E  + LPADKR C+S DF P TS                          S+ P
Sbjct: 3   NRGQKRMEVVEELPADKRACNSQDFRPSTSGSSVQAQANGTSSGHENVDADMDTSSSASP 62

Query: 224 PADCDMEQDPXXXXXXXXXXXXXXXXXXXPNYA-SRNAENRTRLEGIVPRL-GDADFGAV 397
            +  D EQD                     +Y   R++ ++ +L+ ++  L G+ D    
Sbjct: 63  SSRSDEEQDKDSDYGSCDSDEEDPRQRVLQDYQRQRSSGDQGKLKSLLASLTGETDPSGQ 122

Query: 398 LAVLTELCEVLSFCMEDTLSRPAMEGLVAALVRLAGTEAYPDVMLLSIRALTYLCDIMPR 577
           L+ LTELCEVLSFC E++LS    + L   LV+L+  E   D+MLL+IRA+TYLCD+ PR
Sbjct: 123 LSELTELCEVLSFCTEESLSSVMADMLSPVLVKLSKHENNADIMLLAIRAITYLCDVYPR 182

Query: 578 AVDVVVRHEALPVLCGRLMVIEYLDVAEQCLQVL 679
           +V  +VRH+ +P LC RL+ IEYLDVAEQCLQ L
Sbjct: 183 SVASLVRHDTIPALCQRLLTIEYLDVAEQCLQAL 216


>ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Ricinus communis]
           gi|223535482|gb|EEF37151.1| ubiquitin protein ligase
           E3a, putative [Ricinus communis]
          Length = 1561

 Score =  143 bits (360), Expect = 4e-32
 Identities = 93/215 (43%), Positives = 114/215 (53%), Gaps = 29/215 (13%)
 Frame = +2

Query: 122 DRGRKRSEAGDHLPADKRPCSSSDFHPGTSSSEPPA------------DCDME------- 244
           +RG+KR+E  D LPADKR CSS +F P +S+S                + DM+       
Sbjct: 3   NRGQKRTEVIDELPADKRACSSLEFRPSSSNSSIQTHVNSTNSTPETHEADMDTSSSGSA 62

Query: 245 --QDPXXXXXXXXXXXXXXXXXXXPNYASRNAENRTRLEGIVPRLGDA--------DFGA 394
                                   P ++S     R R  G   RL +A        +   
Sbjct: 63  SSHSEEEEHERDSAYGSCDSDDAIPRHSSLRNFQRHRSLGDHGRLRNALSNLSEGTEPSG 122

Query: 395 VLAVLTELCEVLSFCMEDTLSRPAMEGLVAALVRLAGTEAYPDVMLLSIRALTYLCDIMP 574
            LA LT+LCEVLSFC +D+LS    + L   LVRLA  E+ PDVMLL+IRALTYLCD  P
Sbjct: 123 QLAALTDLCEVLSFCTDDSLSSMMADTLSPVLVRLARHESNPDVMLLAIRALTYLCDACP 182

Query: 575 RAVDVVVRHEALPVLCGRLMVIEYLDVAEQCLQVL 679
           RA   +VRH+A+PVLC RLM IEYLDVAEQCLQ L
Sbjct: 183 RASSYLVRHDAVPVLCERLMAIEYLDVAEQCLQAL 217


>ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1558

 Score =  136 bits (343), Expect = 3e-30
 Identities = 84/210 (40%), Positives = 110/210 (52%), Gaps = 25/210 (11%)
 Frame = +2

Query: 125 RGRKRSEAGDHLPADKRPCSSSDFHPGTS---------------------SSEPPADCDM 241
           RG+KR E  D LPADKR C+S DF P TS                     SS   A    
Sbjct: 4   RGQKRPEMVDELPADKRACTSLDFRPSTSNSSVQTQMNSTVEAHDHDMDTSSSASASSQS 63

Query: 242 EQDPXXXXXXXXXXXXXXXXXXXP---NYASRNAENRTRLEGIVPRL-GDADFGAVLAVL 409
           E +P                        +  R + +  + + I+  L G ++  + LAVL
Sbjct: 64  EGEPEKDSAYGSCDSDDMEQHHSTLREYHRQRLSSDHGKFKNIIYSLSGQSEPSSQLAVL 123

Query: 410 TELCEVLSFCMEDTLSRPAMEGLVAALVRLAGTEAYPDVMLLSIRALTYLCDIMPRAVDV 589
           TELCEVLSFC E ++S    + L   LV+LA  E+ PD+ML SIRA+TY+CD+ PR+   
Sbjct: 124 TELCEVLSFCTEGSISSMTSDLLSPLLVKLAQNESNPDIMLFSIRAITYICDLYPRSAAF 183

Query: 590 VVRHEALPVLCGRLMVIEYLDVAEQCLQVL 679
           +V H+A+P LC RL+ IEY DVAEQCLQ L
Sbjct: 184 LVHHDAVPTLCQRLLAIEYQDVAEQCLQAL 213


>ref|NP_195908.1| E3 ubiquitin-protein ligase UPL4 [Arabidopsis thaliana]
           gi|75181166|sp|Q9LYZ7.1|UPL4_ARATH RecName: Full=E3
           ubiquitin-protein ligase UPL4; Short=Ubiquitin-protein
           ligase 4 gi|7413563|emb|CAB86042.1| putative protein
           [Arabidopsis thaliana] gi|332003148|gb|AED90531.1| E3
           ubiquitin-protein ligase UPL4 [Arabidopsis thaliana]
          Length = 1502

 Score =  132 bits (332), Expect = 6e-29
 Identities = 85/219 (38%), Positives = 113/219 (51%), Gaps = 33/219 (15%)
 Frame = +2

Query: 122 DRGRKRSEAGDHLPADKRPCSSSDFHPGTSSSEPPA------------DCDM-------- 241
           +RG+KR E  + LPADKR C+S DF P TS S   A            D DM        
Sbjct: 3   NRGQKRMEVVEELPADKRACNSQDFRPSTSGSSVQAQANDTNPGHENVDADMDTSSSASP 62

Query: 242 -----EQDPXXXXXXXXXXXXXXXXXXXPNYA-------SRNAENRTRLEGIVPRL-GDA 382
                E++                    P           R++ +  +L+ ++  L G+ 
Sbjct: 63  SSRSDEEEQEEQDKEDSDYGSCDSDEEDPRQRVLQDYQRQRSSGDHGKLKSLLLNLTGET 122

Query: 383 DFGAVLAVLTELCEVLSFCMEDTLSRPAMEGLVAALVRLAGTEAYPDVMLLSIRALTYLC 562
           D    L+ LTELCEVLSF  E++LS      L   LV+LA  E   D+MLL+IRA+TYLC
Sbjct: 123 DPSGQLSRLTELCEVLSFSTEESLSSVMANMLSPVLVKLAKHENNADIMLLAIRAITYLC 182

Query: 563 DIMPRAVDVVVRHEALPVLCGRLMVIEYLDVAEQCLQVL 679
           D+ P +V+ +VRH+ +P LC RL+ IEYLDVAEQCLQ L
Sbjct: 183 DVYPPSVEFLVRHDTIPALCQRLLTIEYLDVAEQCLQAL 221


>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
          Length = 1575

 Score =  129 bits (325), Expect = 4e-28
 Identities = 85/226 (37%), Positives = 113/226 (50%), Gaps = 40/226 (17%)
 Frame = +2

Query: 122 DRGRKRSEAGDHLPADKRPCSSSDFH-------PGTSSSEPPADCDMEQDPXXXXXXXXX 280
           +RG+KR E+ + LPADKR CSS +F        PG + +  P      QD          
Sbjct: 3   NRGQKRPESVEELPADKRACSSLEFRPSSSSNSPGQTHTNSPNLAPESQDGGHDGGEMDT 62

Query: 281 XXXXXXXXXXPN------YAS------------------------RNAENRTRLEGIVPR 370
                             Y S                        R++ ++ + + I+  
Sbjct: 63  SSSASGSVRSEEAEKDSAYGSCDSDDLADGELRFNRDILRDFQRRRSSGDQAKFKKILVT 122

Query: 371 LGDAD---FGAVLAVLTELCEVLSFCMEDTLSRPAMEGLVAALVRLAGTEAYPDVMLLSI 541
           L +AD      VLA LTELCEVLSFC E +LS   ++ L   LV+ A  E+ PD+MLL+I
Sbjct: 123 LTEADEVDVSGVLAALTELCEVLSFCTESSLSSLTVDSLAPVLVKHAKHESNPDIMLLAI 182

Query: 542 RALTYLCDIMPRAVDVVVRHEALPVLCGRLMVIEYLDVAEQCLQVL 679
           RA+TYLCD+ PR+  ++ RH  +P LC RLM IEYLDVAEQCLQ L
Sbjct: 183 RAITYLCDVFPRSSGLLSRHGVVPALCERLMAIEYLDVAEQCLQAL 228