BLASTX nr result

ID: Dioscorea21_contig00007450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007450
         (1762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002437923.1| hypothetical protein SORBIDRAFT_10g004840 [S...   423   0.0  
ref|NP_001059374.1| Os07g0281000 [Oryza sativa Japonica Group] g...   420   0.0  
ref|XP_002454402.1| hypothetical protein SORBIDRAFT_04g030200 [S...   417   0.0  
gb|AFW85648.1| pre-mRNA-splicing factor SLT11 [Zea mays]              415   0.0  
ref|NP_001151426.1| LOC100285059 [Zea mays] gi|195646758|gb|ACG4...   415   0.0  

>ref|XP_002437923.1| hypothetical protein SORBIDRAFT_10g004840 [Sorghum bicolor]
            gi|241916146|gb|EER89290.1| hypothetical protein
            SORBIDRAFT_10g004840 [Sorghum bicolor]
          Length = 491

 Score =  423 bits (1088), Expect(2) = 0.0
 Identities = 207/276 (75%), Positives = 239/276 (86%)
 Frame = -1

Query: 1270 AGIDYESSFGKARPNDTILKLQRTMPYYQRNRAHVCSFYARGECARGSECPYRHEMPQTG 1091
            AGIDY+SS+GKARPNDTILKLQRT PYY+RNRAHVCSF+ RGEC RG+ECPYRHEMP+TG
Sbjct: 128  AGIDYDSSYGKARPNDTILKLQRTAPYYKRNRAHVCSFFVRGECTRGAECPYRHEMPETG 187

Query: 1090 ELSQQNIKDRYYGINDPVAMKLLAKAGEMPSLVPPDDESIKTLYVGGLDARISEQDLRDQ 911
            ELSQQNIKDRYYG+NDPVA+KLL+KAGEMPSL PPDDE+I+TLY+GGLD+RI+EQDLRDQ
Sbjct: 188  ELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLTPPDDETIRTLYIGGLDSRITEQDLRDQ 247

Query: 910  FYAYGEIESIRMVLQRACAFVAYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQALKPE 731
            FYA+GEIESIRMVLQRA AFV YTTREGAEKAAEEL+NKLVIKG+RLKLMWG+PQA KPE
Sbjct: 248  FYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEELANKLVIKGVRLKLMWGKPQAPKPE 307

Query: 730  GEGGEDEAARQGLVAHGSMLPRALVSQQQSGQQPLPFSIEDHXXXXXQPAMPYFNIPVPL 551
                EDE+ RQG V+HG +LPRA++SQQQS  QP P  +ED       PA  YFNIP P 
Sbjct: 308  ----EDESGRQGQVSHGGLLPRAVISQQQSSDQPQPPGMEDQ-QQQAAPASYYFNIPAPA 362

Query: 550  PSQRTSYPSMDPQRMGAVVPSGEASDSKTGLEKSGQ 443
             ++RT YPSMDPQRMGA+V S + S+ K GL+++GQ
Sbjct: 363  ATERTLYPSMDPQRMGAIVKS-QDSEGKPGLQQAGQ 397



 Score =  260 bits (665), Expect(2) = 0.0
 Identities = 118/126 (93%), Positives = 124/126 (98%)
 Frame = -3

Query: 1730 MAHRLLRDAQADGWERSDFPIICESCLGDNPYLRMTKADYDKECKICTRPFTVFRWRPGR 1551
            MAHRLLRDAQADGWERSDFPIICESCLGDNPY+RM +A+YDKECKIC RPFTVFRWRPGR
Sbjct: 1    MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 60

Query: 1550 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 1371
            DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL+INSND+IP+SDVNREYFAE
Sbjct: 61   DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAE 120

Query: 1370 EHDRRA 1353
            EHDRRA
Sbjct: 121  EHDRRA 126


>ref|NP_001059374.1| Os07g0281000 [Oryza sativa Japonica Group]
            gi|75325391|sp|Q6Z358.1|C3H49_ORYSJ RecName: Full=Zinc
            finger CCCH domain-containing protein 49; Short=OsC3H49
            gi|34394813|dbj|BAC84225.1| RRM-containing RNA-binding
            protein-like [Oryza sativa Japonica Group]
            gi|113610910|dbj|BAF21288.1| Os07g0281000 [Oryza sativa
            Japonica Group] gi|222636833|gb|EEE66965.1| hypothetical
            protein OsJ_23846 [Oryza sativa Japonica Group]
          Length = 486

 Score =  420 bits (1079), Expect(2) = 0.0
 Identities = 210/283 (74%), Positives = 237/283 (83%)
 Frame = -1

Query: 1270 AGIDYESSFGKARPNDTILKLQRTMPYYQRNRAHVCSFYARGECARGSECPYRHEMPQTG 1091
            AGIDY+SS GKAR NDTILKLQRT PYY+RNRAHVCSFY RGEC RG+ECPYRHEMP+TG
Sbjct: 128  AGIDYDSSNGKARANDTILKLQRTAPYYKRNRAHVCSFYVRGECTRGAECPYRHEMPETG 187

Query: 1090 ELSQQNIKDRYYGINDPVAMKLLAKAGEMPSLVPPDDESIKTLYVGGLDARISEQDLRDQ 911
            ELSQQNIKDRYYG+NDPVA+KLL+KAGEMPSL PPDDESI+TLY+GGLD+R++EQDLRDQ
Sbjct: 188  ELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLTPPDDESIRTLYIGGLDSRVTEQDLRDQ 247

Query: 910  FYAYGEIESIRMVLQRACAFVAYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQALKPE 731
            FYA+GEIE+IRMVLQRACAFV YTTREGAEKAAEEL+NKLVIKG+RLKLMWG+PQA KPE
Sbjct: 248  FYAHGEIETIRMVLQRACAFVTYTTREGAEKAAEELANKLVIKGVRLKLMWGKPQAPKPE 307

Query: 730  GEGGEDEAARQGLVAHGSMLPRALVSQQQSGQQPLPFSIEDHXXXXXQPAMPYFNIPVPL 551
                EDEA RQG VAHG MLPRA++SQQQSG QP P  +E         A  YFNIP P 
Sbjct: 308  ----EDEAGRQGHVAHGGMLPRAVISQQQSGDQPQPPGMEGQ--QQPASASYYFNIPAPP 361

Query: 550  PSQRTSYPSMDPQRMGAVVPSGEASDSKTGLEKSGQPRVLDGS 422
             ++RT YPSMDPQRMGA+V S E  D K G +++GQ +    S
Sbjct: 362  AAERTLYPSMDPQRMGALVESQE-GDGKPGPQQAGQGQASSSS 403



 Score =  259 bits (663), Expect(2) = 0.0
 Identities = 118/126 (93%), Positives = 123/126 (97%)
 Frame = -3

Query: 1730 MAHRLLRDAQADGWERSDFPIICESCLGDNPYLRMTKADYDKECKICTRPFTVFRWRPGR 1551
            MAHRLLRDAQADGWERSDFPIICESCLGDNPY+RM +A+YDKECKIC RPFTVFRWRPGR
Sbjct: 1    MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 60

Query: 1550 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 1371
            DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALS NSND+IP+SDVNREYFAE
Sbjct: 61   DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSTNSNDAIPRSDVNREYFAE 120

Query: 1370 EHDRRA 1353
            EHDRRA
Sbjct: 121  EHDRRA 126


>ref|XP_002454402.1| hypothetical protein SORBIDRAFT_04g030200 [Sorghum bicolor]
            gi|241934233|gb|EES07378.1| hypothetical protein
            SORBIDRAFT_04g030200 [Sorghum bicolor]
          Length = 491

 Score =  417 bits (1071), Expect(2) = 0.0
 Identities = 205/276 (74%), Positives = 236/276 (85%)
 Frame = -1

Query: 1270 AGIDYESSFGKARPNDTILKLQRTMPYYQRNRAHVCSFYARGECARGSECPYRHEMPQTG 1091
            AGIDY+SS+GKARPNDTILKLQRT PYY+RNRAHVCSF+ RGEC RG+ECPYRHEMP+TG
Sbjct: 128  AGIDYDSSYGKARPNDTILKLQRTAPYYKRNRAHVCSFFVRGECTRGAECPYRHEMPETG 187

Query: 1090 ELSQQNIKDRYYGINDPVAMKLLAKAGEMPSLVPPDDESIKTLYVGGLDARISEQDLRDQ 911
            ELSQQNIKDRYYG+NDPVA+KLL+KAGEMPSL PPDDE+I+TLY+GGLD RI+EQDLRDQ
Sbjct: 188  ELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLTPPDDETIRTLYIGGLDNRITEQDLRDQ 247

Query: 910  FYAYGEIESIRMVLQRACAFVAYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQALKPE 731
            FYA+GEIESIRMVLQRA AFV YTTREGAEKAAEEL+NKLVIKG+RLKLMWG+PQA KPE
Sbjct: 248  FYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEELANKLVIKGVRLKLMWGKPQAPKPE 307

Query: 730  GEGGEDEAARQGLVAHGSMLPRALVSQQQSGQQPLPFSIEDHXXXXXQPAMPYFNIPVPL 551
                EDE+ RQG V+HG +LPRA++SQQQSG QP P  +E        PA  YFNIP P 
Sbjct: 308  ----EDESGRQGQVSHGGLLPRAVISQQQSGDQPQPPGMEGQ-QQQAAPASYYFNIPAPP 362

Query: 550  PSQRTSYPSMDPQRMGAVVPSGEASDSKTGLEKSGQ 443
             ++RT YPSMDPQRMGA+V S +  + K G +++GQ
Sbjct: 363  AAERTLYPSMDPQRMGAIVKS-QDGEGKPGPQQAGQ 397



 Score =  260 bits (665), Expect(2) = 0.0
 Identities = 118/126 (93%), Positives = 124/126 (98%)
 Frame = -3

Query: 1730 MAHRLLRDAQADGWERSDFPIICESCLGDNPYLRMTKADYDKECKICTRPFTVFRWRPGR 1551
            MAHRLLRDAQADGWERSDFPIICESCLGDNPY+RM +A+YDKECKIC RPFTVFRWRPGR
Sbjct: 1    MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 60

Query: 1550 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 1371
            DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL+INSND+IP+SDVNREYFAE
Sbjct: 61   DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAE 120

Query: 1370 EHDRRA 1353
            EHDRRA
Sbjct: 121  EHDRRA 126


>gb|AFW85648.1| pre-mRNA-splicing factor SLT11 [Zea mays]
          Length = 493

 Score =  415 bits (1066), Expect(2) = 0.0
 Identities = 204/276 (73%), Positives = 236/276 (85%)
 Frame = -1

Query: 1270 AGIDYESSFGKARPNDTILKLQRTMPYYQRNRAHVCSFYARGECARGSECPYRHEMPQTG 1091
            AGIDY+SS+GKARPNDTILKLQRT PYY+RNRAHVCSF+ RGEC RG+ECPYRHEMP+TG
Sbjct: 128  AGIDYDSSYGKARPNDTILKLQRTAPYYKRNRAHVCSFFVRGECTRGAECPYRHEMPETG 187

Query: 1090 ELSQQNIKDRYYGINDPVAMKLLAKAGEMPSLVPPDDESIKTLYVGGLDARISEQDLRDQ 911
            ELSQQNIKDRYYG+NDPVA+KLL+KAGEMPSL PPDDE+I+TLY+GGLD+RI+EQDLRDQ
Sbjct: 188  ELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLTPPDDETIRTLYIGGLDSRITEQDLRDQ 247

Query: 910  FYAYGEIESIRMVLQRACAFVAYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQALKPE 731
            FYA+GEIESIRMVLQRA AFV YTTREGAEKAAEEL+NKLVIKG+RLKLMWG+PQA KPE
Sbjct: 248  FYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEELANKLVIKGVRLKLMWGKPQAPKPE 307

Query: 730  GEGGEDEAARQGLVAHGSMLPRALVSQQQSGQQPLPFSIEDHXXXXXQPAMPYFNIPVPL 551
                EDE+ R G V+HG +LPRA++SQQQSG QP P  +E        PA  YFNIP P 
Sbjct: 308  ----EDESGRLGQVSHGGLLPRAVISQQQSGDQPQPPGMEGQ-QQQAAPASYYFNIPAPP 362

Query: 550  PSQRTSYPSMDPQRMGAVVPSGEASDSKTGLEKSGQ 443
             ++RT YPSMDPQRMGA+V   + S+ K G +++GQ
Sbjct: 363  ATERTVYPSMDPQRMGAIVKPHD-SEGKPGPQQAGQ 397



 Score =  261 bits (668), Expect(2) = 0.0
 Identities = 119/126 (94%), Positives = 124/126 (98%)
 Frame = -3

Query: 1730 MAHRLLRDAQADGWERSDFPIICESCLGDNPYLRMTKADYDKECKICTRPFTVFRWRPGR 1551
            MAHRLLRDAQADGWERSDFPIICESCLGDNPY+RM +A+YDKECKIC RPFTVFRWRPGR
Sbjct: 1    MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 60

Query: 1550 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 1371
            DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSINSND+IP+SDVNREYFAE
Sbjct: 61   DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPRSDVNREYFAE 120

Query: 1370 EHDRRA 1353
            EHDRRA
Sbjct: 121  EHDRRA 126


>ref|NP_001151426.1| LOC100285059 [Zea mays] gi|195646758|gb|ACG42847.1| pre-mRNA-splicing
            factor SLT11 [Zea mays]
          Length = 490

 Score =  415 bits (1066), Expect(2) = 0.0
 Identities = 204/276 (73%), Positives = 236/276 (85%)
 Frame = -1

Query: 1270 AGIDYESSFGKARPNDTILKLQRTMPYYQRNRAHVCSFYARGECARGSECPYRHEMPQTG 1091
            AGIDY+SS+GKARPNDTILKLQRT PYY+RNRAHVCSF+ RGEC RG+ECPYRHEMP+TG
Sbjct: 128  AGIDYDSSYGKARPNDTILKLQRTAPYYKRNRAHVCSFFVRGECTRGAECPYRHEMPETG 187

Query: 1090 ELSQQNIKDRYYGINDPVAMKLLAKAGEMPSLVPPDDESIKTLYVGGLDARISEQDLRDQ 911
            ELSQQNIKDRYYG+NDPVA+KLL+KAGEMPSL PPDDE+I+TLY+GGLD+RI+EQDLRDQ
Sbjct: 188  ELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLTPPDDETIRTLYIGGLDSRITEQDLRDQ 247

Query: 910  FYAYGEIESIRMVLQRACAFVAYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQALKPE 731
            FYA+GEIESIRMVLQRA AFV YTTREGAEKAAEEL+NKLVIKG+RLKLMWG+PQA KPE
Sbjct: 248  FYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEELANKLVIKGVRLKLMWGKPQAPKPE 307

Query: 730  GEGGEDEAARQGLVAHGSMLPRALVSQQQSGQQPLPFSIEDHXXXXXQPAMPYFNIPVPL 551
                EDE+ R G V+HG +LPRA++SQQQSG QP P  +E        PA  YFNIP P 
Sbjct: 308  ----EDESGRLGQVSHGGLLPRAVISQQQSGDQPQPPGMEGQ-QQQAAPASYYFNIPAPP 362

Query: 550  PSQRTSYPSMDPQRMGAVVPSGEASDSKTGLEKSGQ 443
             ++RT YPSMDPQRMGA+V   + S+ K G +++GQ
Sbjct: 363  ATERTVYPSMDPQRMGAIVKPHD-SEGKLGPQQAGQ 397



 Score =  261 bits (668), Expect(2) = 0.0
 Identities = 119/126 (94%), Positives = 124/126 (98%)
 Frame = -3

Query: 1730 MAHRLLRDAQADGWERSDFPIICESCLGDNPYLRMTKADYDKECKICTRPFTVFRWRPGR 1551
            MAHRLLRDAQADGWERSDFPIICESCLGDNPY+RM +A+YDKECKIC RPFTVFRWRPGR
Sbjct: 1    MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 60

Query: 1550 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDSIPKSDVNREYFAE 1371
            DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSINSND+IP+SDVNREYFAE
Sbjct: 61   DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPRSDVNREYFAE 120

Query: 1370 EHDRRA 1353
            EHDRRA
Sbjct: 121  EHDRRA 126


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