BLASTX nr result

ID: Dioscorea21_contig00007448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007448
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271026.1| PREDICTED: uncharacterized protein LOC100249...   175   4e-42
ref|XP_002525314.1| conserved hypothetical protein [Ricinus comm...   173   1e-41
ref|XP_002320478.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_002879405.1| PTAC18 [Arabidopsis lyrata subsp. lyrata] gi...   166   1e-39
ref|NP_180777.1| plastid transcriptionally active 18 [Arabidopsi...   165   3e-39

>ref|XP_002271026.1| PREDICTED: uncharacterized protein LOC100249947 [Vitis vinifera]
           gi|297739196|emb|CBI28847.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score =  175 bits (443), Expect = 4e-42
 Identities = 77/108 (71%), Positives = 94/108 (87%)
 Frame = -3

Query: 362 RFERPLEDIYSVRVERGISKTRLEELGVDRWSTWKTGKCQFPWDWHVDQLVYVVSGEVRV 183
           R E+PLE++Y+VRVER +S  RLEELGV RWS WKTGK + PWDWHVDQLVY+  GEVRV
Sbjct: 38  RIEKPLEELYNVRVERQVSPKRLEELGVSRWSIWKTGKSRLPWDWHVDQLVYIEEGEVRV 97

Query: 182 VPEGATSGERHMRFVAGDLVRYPKWFEADLFFNGPYEEKYRFLAFGED 39
           VP+G+   +++M+FVAGDLVRYPKWFEADLFFNGPY+E+YRF A+G+D
Sbjct: 98  VPDGS---KKYMQFVAGDLVRYPKWFEADLFFNGPYQERYRFRAYGDD 142


>ref|XP_002525314.1| conserved hypothetical protein [Ricinus communis]
           gi|223535373|gb|EEF37047.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 146

 Score =  173 bits (438), Expect = 1e-41
 Identities = 77/108 (71%), Positives = 92/108 (85%)
 Frame = -3

Query: 362 RFERPLEDIYSVRVERGISKTRLEELGVDRWSTWKTGKCQFPWDWHVDQLVYVVSGEVRV 183
           R E+ LE++Y+VRVER ++  RL +LGV RWS WKTGKC+ PWDW VDQLVY+  GEVRV
Sbjct: 41  RVEKSLEELYNVRVERKVTPERLADLGVSRWSMWKTGKCKLPWDWQVDQLVYIEEGEVRV 100

Query: 182 VPEGATSGERHMRFVAGDLVRYPKWFEADLFFNGPYEEKYRFLAFGED 39
           VPEG+   ER+MRFVAGDLVRYPKWFEADLFFNGPY+E+YRF A+G+D
Sbjct: 101 VPEGS---ERYMRFVAGDLVRYPKWFEADLFFNGPYQERYRFRAYGDD 145


>ref|XP_002320478.1| predicted protein [Populus trichocarpa] gi|222861251|gb|EEE98793.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  167 bits (422), Expect = 1e-39
 Identities = 72/106 (67%), Positives = 90/106 (84%)
 Frame = -3

Query: 356 ERPLEDIYSVRVERGISKTRLEELGVDRWSTWKTGKCQFPWDWHVDQLVYVVSGEVRVVP 177
           E+PLE++Y++RVER +S+ RL ELGV +WS WKT KC+ PWDW VDQLVY+  GEVRVVP
Sbjct: 38  EKPLEELYNIRVERKVSRDRLAELGVSKWSAWKTDKCKLPWDWQVDQLVYIEEGEVRVVP 97

Query: 176 EGATSGERHMRFVAGDLVRYPKWFEADLFFNGPYEEKYRFLAFGED 39
           EG+   +++MRFVAGDLVRYPKWFEADLFFN PY+E+Y F A+G+D
Sbjct: 98  EGS---KKYMRFVAGDLVRYPKWFEADLFFNAPYQERYSFRAYGDD 140


>ref|XP_002879405.1| PTAC18 [Arabidopsis lyrata subsp. lyrata]
           gi|297325244|gb|EFH55664.1| PTAC18 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 139

 Score =  166 bits (421), Expect = 1e-39
 Identities = 73/106 (68%), Positives = 90/106 (84%)
 Frame = -3

Query: 356 ERPLEDIYSVRVERGISKTRLEELGVDRWSTWKTGKCQFPWDWHVDQLVYVVSGEVRVVP 177
           E+PLE++Y+V+VER +S+ RLEELGV RWS WKTGKC+ PWDW VDQLVY+  GEVRVVP
Sbjct: 37  EKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLVYIEEGEVRVVP 96

Query: 176 EGATSGERHMRFVAGDLVRYPKWFEADLFFNGPYEEKYRFLAFGED 39
           EG+   +R+M+F+AGDLVRYPKW EADLFFN PY E+Y F A+G+D
Sbjct: 97  EGS---KRYMQFLAGDLVRYPKWLEADLFFNAPYRERYCFKAYGDD 139


>ref|NP_180777.1| plastid transcriptionally active 18 [Arabidopsis thaliana]
           gi|4263701|gb|AAD15387.1| hypothetical protein
           [Arabidopsis thaliana] gi|26450279|dbj|BAC42256.1|
           unknown protein [Arabidopsis thaliana]
           gi|28827704|gb|AAO50696.1| unknown protein [Arabidopsis
           thaliana] gi|330253552|gb|AEC08646.1| plastid
           transcriptionally active 18 [Arabidopsis thaliana]
          Length = 139

 Score =  165 bits (418), Expect = 3e-39
 Identities = 73/106 (68%), Positives = 90/106 (84%)
 Frame = -3

Query: 356 ERPLEDIYSVRVERGISKTRLEELGVDRWSTWKTGKCQFPWDWHVDQLVYVVSGEVRVVP 177
           E+PLE++Y+V+VER +S+ RLEELGV RWS WKTGKC+ PWDW VDQLVY+  GEVRVVP
Sbjct: 37  EKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLVYIEQGEVRVVP 96

Query: 176 EGATSGERHMRFVAGDLVRYPKWFEADLFFNGPYEEKYRFLAFGED 39
           EG+   +R+M+F+AGDLVRYPKW EADLFFN PY E+Y F A+G+D
Sbjct: 97  EGS---KRYMQFLAGDLVRYPKWLEADLFFNAPYIERYCFKAYGDD 139


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