BLASTX nr result
ID: Dioscorea21_contig00007447
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00007447
(1541 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation spec... 956 0.0
emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera] 956 0.0
ref|XP_002271646.2| PREDICTED: cleavage and polyadenylation spec... 941 0.0
ref|XP_002323824.1| predicted protein [Populus trichocarpa] gi|2... 905 0.0
ref|NP_176297.1| cleavage and polyadenylation specificity factor... 902 0.0
>ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Vitis vinifera]
Length = 694
Score = 956 bits (2472), Expect = 0.0
Identities = 468/496 (94%), Positives = 489/496 (98%)
Frame = -1
Query: 1490 KRRESTVTREGDQLVITPLGAGNEVGRSCVHMTYRGKTILFDCGIHPAYSGMAALPYFDE 1311
KR +S++TREGDQL+ITPLGAGNEVGRSCV+M+Y+GKTILFDCGIHPAYSGMAALPYFDE
Sbjct: 11 KRPDSSLTREGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDE 70
Query: 1310 IDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSV 1131
IDPST+DVLL+THFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSV
Sbjct: 71 IDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSV 130
Query: 1130 EDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTG 951
EDMLYDEQDILRSMD+IEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTG
Sbjct: 131 EDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTG 190
Query: 950 DYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRLVREKRFTDVIHKTIAEGGRVLI 771
DYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPR VREKRFTDVIH TI++GGRVLI
Sbjct: 191 DYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRHVREKRFTDVIHSTISQGGRVLI 250
Query: 770 PAFALGRAQELLLILDEYWARNPELHNIPIYYASPLAKRCMAVYQTYINSMNERIRNQFA 591
PAFALGRAQELLLILDEYW+ +PELHNIPIYYASPLAKRCMAVYQTYINSMNERIRNQFA
Sbjct: 251 PAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYINSMNERIRNQFA 310
Query: 590 NSNPFDFKHISPLKSIENFDDVGPSVVMASPSGLQSGLSRQLFDKWCADKRNACVIPGYV 411
NSNPFDFKHISPLKSIENF+DVGPSVVMASPSGLQSGLSRQLFD WC+DK+NACVIPGYV
Sbjct: 311 NSNPFDFKHISPLKSIENFNDVGPSVVMASPSGLQSGLSRQLFDMWCSDKKNACVIPGYV 370
Query: 410 VEGTLAKTIITEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKELMPPNIILVH 231
VEGTLAKTII EPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKELMPPNIILVH
Sbjct: 371 VEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKELMPPNIILVH 430
Query: 230 GEANEMGRLKQKLITQFADKNTKIITPKNCQSVEMYFSSEKMAKTIGRLADKTPDVGETV 51
GEANEMGRLKQKLITQFAD+NTKII+PKNCQSVEMYF+SEKMAKTIGRLA+KTP VGETV
Sbjct: 431 GEANEMGRLKQKLITQFADRNTKIISPKNCQSVEMYFNSEKMAKTIGRLAEKTPGVGETV 490
Query: 50 SGLLVKKGFTYQIMAP 3
SGLLVKKGFTYQIMAP
Sbjct: 491 SGLLVKKGFTYQIMAP 506
>emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera]
Length = 687
Score = 956 bits (2472), Expect = 0.0
Identities = 468/496 (94%), Positives = 489/496 (98%)
Frame = -1
Query: 1490 KRRESTVTREGDQLVITPLGAGNEVGRSCVHMTYRGKTILFDCGIHPAYSGMAALPYFDE 1311
KR +S++TREGDQL+ITPLGAGNEVGRSCV+M+Y+GKTILFDCGIHPAYSGMAALPYFDE
Sbjct: 4 KRPDSSLTREGDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDE 63
Query: 1310 IDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSV 1131
IDPST+DVLL+THFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSV
Sbjct: 64 IDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSV 123
Query: 1130 EDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTG 951
EDMLYDEQDILRSMD+IEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTG
Sbjct: 124 EDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTG 183
Query: 950 DYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRLVREKRFTDVIHKTIAEGGRVLI 771
DYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPR VREKRFTDVIH TI++GGRVLI
Sbjct: 184 DYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRHVREKRFTDVIHSTISQGGRVLI 243
Query: 770 PAFALGRAQELLLILDEYWARNPELHNIPIYYASPLAKRCMAVYQTYINSMNERIRNQFA 591
PAFALGRAQELLLILDEYW+ +PELHNIPIYYASPLAKRCMAVYQTYINSMNERIRNQFA
Sbjct: 244 PAFALGRAQELLLILDEYWSNHPELHNIPIYYASPLAKRCMAVYQTYINSMNERIRNQFA 303
Query: 590 NSNPFDFKHISPLKSIENFDDVGPSVVMASPSGLQSGLSRQLFDKWCADKRNACVIPGYV 411
NSNPFDFKHISPLKSIENF+DVGPSVVMASPSGLQSGLSRQLFD WC+DK+NACVIPGYV
Sbjct: 304 NSNPFDFKHISPLKSIENFNDVGPSVVMASPSGLQSGLSRQLFDMWCSDKKNACVIPGYV 363
Query: 410 VEGTLAKTIITEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKELMPPNIILVH 231
VEGTLAKTII EPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKELMPPNIILVH
Sbjct: 364 VEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKELMPPNIILVH 423
Query: 230 GEANEMGRLKQKLITQFADKNTKIITPKNCQSVEMYFSSEKMAKTIGRLADKTPDVGETV 51
GEANEMGRLKQKLITQFAD+NTKII+PKNCQSVEMYF+SEKMAKTIGRLA+KTP VGETV
Sbjct: 424 GEANEMGRLKQKLITQFADRNTKIISPKNCQSVEMYFNSEKMAKTIGRLAEKTPGVGETV 483
Query: 50 SGLLVKKGFTYQIMAP 3
SGLLVKKGFTYQIMAP
Sbjct: 484 SGLLVKKGFTYQIMAP 499
>ref|XP_002271646.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Vitis vinifera]
Length = 693
Score = 941 bits (2433), Expect = 0.0
Identities = 462/496 (93%), Positives = 485/496 (97%)
Frame = -1
Query: 1490 KRRESTVTREGDQLVITPLGAGNEVGRSCVHMTYRGKTILFDCGIHPAYSGMAALPYFDE 1311
KR +S++TR GDQL+ITPLGAGNEVGRSCV+M+Y+GKTILFDCGIHPAYSGMAALPYFDE
Sbjct: 11 KRPDSSLTR-GDQLIITPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAALPYFDE 69
Query: 1310 IDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSV 1131
IDPST+DVLL+THFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSV
Sbjct: 70 IDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSV 129
Query: 1130 EDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTG 951
EDMLYDEQDILRSMD+IEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTG
Sbjct: 130 EDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTG 189
Query: 950 DYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRLVREKRFTDVIHKTIAEGGRVLI 771
DYSREEDRHLRAAEIPQF PDICIIESTYGVQLHQPR VREKRFTDVIH TI++GGRVLI
Sbjct: 190 DYSREEDRHLRAAEIPQFCPDICIIESTYGVQLHQPRHVREKRFTDVIHSTISQGGRVLI 249
Query: 770 PAFALGRAQELLLILDEYWARNPELHNIPIYYASPLAKRCMAVYQTYINSMNERIRNQFA 591
PA+ALGRAQELLLILDEYW+ +PELHN+PIYYASPLAKRCMAVYQTYINSMNERIRNQFA
Sbjct: 250 PAYALGRAQELLLILDEYWSNHPELHNVPIYYASPLAKRCMAVYQTYINSMNERIRNQFA 309
Query: 590 NSNPFDFKHISPLKSIENFDDVGPSVVMASPSGLQSGLSRQLFDKWCADKRNACVIPGYV 411
NSNPFDFKHISPLKSIENF+DVGPSVVMASP GLQSGLSRQLFD WC+DK+NACVIPGYV
Sbjct: 310 NSNPFDFKHISPLKSIENFNDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNACVIPGYV 369
Query: 410 VEGTLAKTIITEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKELMPPNIILVH 231
V GTLAKTII EPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKELMPPNIILVH
Sbjct: 370 VGGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKELMPPNIILVH 429
Query: 230 GEANEMGRLKQKLITQFADKNTKIITPKNCQSVEMYFSSEKMAKTIGRLADKTPDVGETV 51
GEANEMGRLKQKLITQFAD NTKII+PKNCQSVEMYF+SEKMAKTIGRLA+KTP+VGETV
Sbjct: 430 GEANEMGRLKQKLITQFADCNTKIISPKNCQSVEMYFNSEKMAKTIGRLAEKTPEVGETV 489
Query: 50 SGLLVKKGFTYQIMAP 3
SGLLVKKGFTYQIMAP
Sbjct: 490 SGLLVKKGFTYQIMAP 505
>ref|XP_002323824.1| predicted protein [Populus trichocarpa] gi|222866826|gb|EEF03957.1|
predicted protein [Populus trichocarpa]
Length = 699
Score = 905 bits (2339), Expect = 0.0
Identities = 438/497 (88%), Positives = 477/497 (95%), Gaps = 1/497 (0%)
Frame = -1
Query: 1490 KRRESTVTREG-DQLVITPLGAGNEVGRSCVHMTYRGKTILFDCGIHPAYSGMAALPYFD 1314
KRR++ VTREG DQL +TPLGAGNEVGRSCV+M+++GKT+LFDCGIHPAYSGMAALPYFD
Sbjct: 11 KRRDAPVTREGGDQLTLTPLGAGNEVGRSCVYMSFKGKTVLFDCGIHPAYSGMAALPYFD 70
Query: 1313 EIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVS 1134
EIDPST+DVLL+THFHLDHAASLPYFLEKTTF+GRVFMTHATKAIYKLLL+DYVKVSKVS
Sbjct: 71 EIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFRGRVFMTHATKAIYKLLLTDYVKVSKVS 130
Query: 1133 VEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYT 954
VEDML+DE+DI RSMD+IEVIDFHQT++VNGI+FWCYTAGHVLGAAMFMVDIAGVRVLYT
Sbjct: 131 VEDMLFDEKDINRSMDKIEVIDFHQTVDVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYT 190
Query: 953 GDYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRLVREKRFTDVIHKTIAEGGRVL 774
GDYSREEDRHLRAAE+PQFSPDICIIESTYGVQLHQPR +REKRFTDVIH TI+ GGRVL
Sbjct: 191 GDYSREEDRHLRAAEMPQFSPDICIIESTYGVQLHQPRHIREKRFTDVIHSTISLGGRVL 250
Query: 773 IPAFALGRAQELLLILDEYWARNPELHNIPIYYASPLAKRCMAVYQTYINSMNERIRNQF 594
IPAFALGRAQELLLILDEYW+ +PELHNIP+YYASPLAK+CM VYQTYI SMNERIRNQF
Sbjct: 251 IPAFALGRAQELLLILDEYWSNHPELHNIPVYYASPLAKKCMTVYQTYILSMNERIRNQF 310
Query: 593 ANSNPFDFKHISPLKSIENFDDVGPSVVMASPSGLQSGLSRQLFDKWCADKRNACVIPGY 414
A+SNPF FKHISPL SIE+F DVGPSVVMA+P GLQSGLSRQLFD WC+DK+NACVIPG+
Sbjct: 311 ADSNPFKFKHISPLNSIEDFTDVGPSVVMATPGGLQSGLSRQLFDMWCSDKKNACVIPGF 370
Query: 413 VVEGTLAKTIITEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKELMPPNIILV 234
+VEGTLAKTII EPKEV LMNGLTAPLNMQVHYISFSAHAD+AQTSTFLKELMPPNIILV
Sbjct: 371 LVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIILV 430
Query: 233 HGEANEMGRLKQKLITQFADKNTKIITPKNCQSVEMYFSSEKMAKTIGRLADKTPDVGET 54
HGEANEMGRLKQKLIT+F D NTKIITPKNCQSVEMYF+SEKMAKT G+LA++TPDVGET
Sbjct: 431 HGEANEMGRLKQKLITEFTDGNTKIITPKNCQSVEMYFNSEKMAKTTGKLAERTPDVGET 490
Query: 53 VSGLLVKKGFTYQIMAP 3
VSG+LVKKGFTYQIMAP
Sbjct: 491 VSGILVKKGFTYQIMAP 507
>ref|NP_176297.1| cleavage and polyadenylation specificity factor subunit 3-I
[Arabidopsis thaliana] gi|30696512|ref|NP_849835.1|
cleavage and polyadenylation specificity factor subunit
3-I [Arabidopsis thaliana]
gi|79320389|ref|NP_001031215.1| cleavage and
polyadenylation specificity factor subunit 3-I
[Arabidopsis thaliana]
gi|75262219|sp|Q9C952.1|CPSF3_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
subunit 3-I; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit I; Short=AtCPSF73-I;
Short=CPSF 73 kDa subunit I
gi|12323330|gb|AAG51638.1|AC018908_4 putative cleavage
and polyadenylation specificity factor; 72745-70039
[Arabidopsis thaliana] gi|23297661|gb|AAN13003.1|
putative cleavage and polyadenylation specificity factor
[Arabidopsis thaliana] gi|24415578|gb|AAN41458.1|
putative cleavage and polyadenylation specificity factor
73 kDa subunit [Arabidopsis thaliana]
gi|222422865|dbj|BAH19419.1| AT1G61010 [Arabidopsis
thaliana] gi|222423059|dbj|BAH19511.1| AT1G61010
[Arabidopsis thaliana] gi|332195645|gb|AEE33766.1|
cleavage and polyadenylation specificity factor subunit
3-I [Arabidopsis thaliana] gi|332195646|gb|AEE33767.1|
cleavage and polyadenylation specificity factor subunit
3-I [Arabidopsis thaliana] gi|332195647|gb|AEE33768.1|
cleavage and polyadenylation specificity factor subunit
3-I [Arabidopsis thaliana]
Length = 693
Score = 902 bits (2331), Expect = 0.0
Identities = 432/496 (87%), Positives = 477/496 (96%)
Frame = -1
Query: 1490 KRRESTVTREGDQLVITPLGAGNEVGRSCVHMTYRGKTILFDCGIHPAYSGMAALPYFDE 1311
KRRE ++R+GDQL++TPLGAG+EVGRSCV+M++RGK ILFDCGIHPAYSGMAALPYFDE
Sbjct: 9 KRREQPISRDGDQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMAALPYFDE 68
Query: 1310 IDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVSKVSV 1131
IDPS++DVLLITHFH+DHAASLPYFLEKTTF GRVFMTHATKAIYKLLL+DYVKVSKVSV
Sbjct: 69 IDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVSKVSV 128
Query: 1130 EDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTG 951
EDML+DEQDI +SMD+IEVIDFHQT+EVNGI+FWCYTAGHVLGAAMFMVDIAGVR+LYTG
Sbjct: 129 EDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRILYTG 188
Query: 950 DYSREEDRHLRAAEIPQFSPDICIIESTYGVQLHQPRLVREKRFTDVIHKTIAEGGRVLI 771
DYSREEDRHLRAAE+PQFSPDICIIEST GVQLHQ R +REKRFTDVIH T+A+GGRVLI
Sbjct: 189 DYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVAQGGRVLI 248
Query: 770 PAFALGRAQELLLILDEYWARNPELHNIPIYYASPLAKRCMAVYQTYINSMNERIRNQFA 591
PAFALGRAQELLLILDEYWA +P+LHNIPIYYASPLAK+CMAVYQTYI SMN+RIRNQFA
Sbjct: 249 PAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMNDRIRNQFA 308
Query: 590 NSNPFDFKHISPLKSIENFDDVGPSVVMASPSGLQSGLSRQLFDKWCADKRNACVIPGYV 411
NSNPF FKHISPL SI++F+DVGPSVVMA+P GLQSGLSRQLFD WC+DK+NAC+IPGY+
Sbjct: 309 NSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNACIIPGYM 368
Query: 410 VEGTLAKTIITEPKEVTLMNGLTAPLNMQVHYISFSAHADFAQTSTFLKELMPPNIILVH 231
VEGTLAKTII EPKEVTLMNGLTAPLNMQVHYISFSAHAD+AQTSTFLKELMPPNIILVH
Sbjct: 369 VEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMPPNIILVH 428
Query: 230 GEANEMGRLKQKLITQFADKNTKIITPKNCQSVEMYFSSEKMAKTIGRLADKTPDVGETV 51
GEANEM RLKQKL+T+F D NTKI+TPKNC+SVEMYF+SEK+AKTIGRLA+KTPDVG+TV
Sbjct: 429 GEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEKTPDVGDTV 488
Query: 50 SGLLVKKGFTYQIMAP 3
SG+LVKKGFTYQIMAP
Sbjct: 489 SGILVKKGFTYQIMAP 504