BLASTX nr result

ID: Dioscorea21_contig00007446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007446
         (1756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283247.2| PREDICTED: uncharacterized protein LOC100247...   242   2e-61
ref|XP_002304703.1| predicted protein [Populus trichocarpa] gi|2...   233   2e-58
ref|XP_004134381.1| PREDICTED: uncharacterized protein LOC101205...   208   3e-51
ref|XP_004157665.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-r...   195   3e-47
ref|NP_563717.1| RING/U-box domain-containing protein [Arabidops...   184   5e-44

>ref|XP_002283247.2| PREDICTED: uncharacterized protein LOC100247656 [Vitis vinifera]
          Length = 363

 Score =  242 bits (618), Expect = 2e-61
 Identities = 146/337 (43%), Positives = 197/337 (58%), Gaps = 21/337 (6%)
 Frame = +1

Query: 352  RHNLVRGKRKSSSIRANGGECSSSTADEAEVLFVRSSAQPTNQRSSRTQNTQLHGCSLLK 531
            R  L++ +RK  S  +N GE S+S  +++E++F+ SS +P+N  S+R+Q+   HG  +++
Sbjct: 32   RSILIKRQRKHGSATSNTGESSTSVFNDSEIMFLGSSGEPSNSGSTRSQSH--HGQGVME 89

Query: 532  PILEGDELDPANIRSGVDPDEQCYGAREDSSAKARQVESDEILARQLQEQLFNESPVFEE 711
            P++E DE  P  IR     +       +DS A+ARQ+E+DEILAR+LQEQL++E PV   
Sbjct: 90   PVIEIDEQSP-EIRHVASRNGGSMN-NDDSDARARQIEADEILARELQEQLYHEMPVDGG 147

Query: 712  M--DATIALSLQQEENLQRAASFLRQGQPHPRNNSTAPVYXXXXXXXXXXXXXXXXXXXX 885
            +  DA IA  LQQ+E +Q  +S      P     + + +Y                    
Sbjct: 148  VGIDAHIAQMLQQQEQVQPTSSSRNHRVPRASGPAISRLYRQSQSRSSQNPSIRRGTQAR 207

Query: 886  XXXXXXXMAYLRS---------------LNRPAR-DLETRLNFLEALEA---EFDXXXXX 1008
                   MA LRS               L+ P   DL+ R++ LEALEA   +F      
Sbjct: 208  GPTSTR-MAQLRSRFPNQSHAIPSGERNLHFPLNMDLDMRIDILEALEAAVGDFGDMRMP 266

Query: 1009 XXXXXXXXEFNENDYEMLLALDDNNEQAGASQRQINTLPQSVVQSENFEEACAVCLETPS 1188
                    +FNENDYEMLLALD+NN   GAS  Q+N+LPQS VQ++NFEE+CA+CLETP+
Sbjct: 267  GHILQIQRDFNENDYEMLLALDENNHNVGASVNQMNSLPQSTVQTDNFEESCAICLETPT 326

Query: 1189 IGDTIRHLPCLHKFHKDCIDSWLKRKTSCPICKCGIT 1299
            IGDTIRHLPCLHKFHKDCID WL R TSCP+CK  IT
Sbjct: 327  IGDTIRHLPCLHKFHKDCIDPWLARSTSCPVCKSSIT 363


>ref|XP_002304703.1| predicted protein [Populus trichocarpa] gi|222842135|gb|EEE79682.1|
            predicted protein [Populus trichocarpa]
          Length = 740

 Score =  233 bits (593), Expect = 2e-58
 Identities = 150/327 (45%), Positives = 177/327 (54%), Gaps = 27/327 (8%)
 Frame = +1

Query: 400  NGGECSSSTADEAEVLFVRSSAQPTNQRSSRTQNTQLHGCSLLKPILEGDELDPANIRSG 579
            N GECS+   D+ EVLF+ SS + ++ RSSR  N Q  G   L+PI E DEL    +R+ 
Sbjct: 421  NQGECSTIVPDDTEVLFLGSSRESSSSRSSRVHNHQHDGN--LEPIYEIDEL-LTEVRNN 477

Query: 580  VDPDEQCYGAREDSSAKARQVESDEILARQLQEQLFNESPVFE--EMDATIALSLQQEEN 753
             DP    + + EDS   ARQVE+DE+LAR+LQE+L++E P F   E+D  IA  LQQEE+
Sbjct: 478  -DPQLIGFRSNEDSDVTARQVEADEMLARELQERLYHEEPTFGGGEIDENIAWVLQQEED 536

Query: 754  LQRAASFLRQGQPHPRNNSTAPVYXXXXXXXXXXXXXXXXXXXXXXXXXXXMAYLRSLNR 933
               A S      PH RN+  A                                  R  NR
Sbjct: 537  ALPATSGHNHPVPHLRNSLVAHSSRQRLPRSSHNPSNRRGNQVQVTTTRASGLRSRLSNR 596

Query: 934  -PAR------------------------DLETRLNFLEALEAEFDXXXXXXXXXXXXXEF 1038
             P R                        DLE RLN LE LEA                +F
Sbjct: 597  TPVRISRERNPFPTVFPGGLNFQFPSGMDLEMRLNILENLEASMTATRMLHVQR----DF 652

Query: 1039 NENDYEMLLALDDNNEQAGASQRQINTLPQSVVQSENFEEACAVCLETPSIGDTIRHLPC 1218
            NENDYEMLLALD+NN Q GAS  QIN LP+SVVQ++NF E CAVCLE P+IG+ IRHLPC
Sbjct: 653  NENDYEMLLALDENNSQHGASANQINCLPESVVQTDNFGETCAVCLEAPTIGEKIRHLPC 712

Query: 1219 LHKFHKDCIDSWLKRKTSCPICKCGIT 1299
            LHKFHKDCID WL RKTSCPICK  IT
Sbjct: 713  LHKFHKDCIDPWLSRKTSCPICKSSIT 739


>ref|XP_004134381.1| PREDICTED: uncharacterized protein LOC101205482 [Cucumis sativus]
          Length = 803

 Score =  208 bits (530), Expect = 3e-51
 Identities = 130/306 (42%), Positives = 175/306 (57%), Gaps = 19/306 (6%)
 Frame = +1

Query: 439  EVLFVRSSAQPTNQRSSRTQNTQLHGCSLLKPILEGDELDPANIRSGVDPDEQCYGARED 618
            +V+ + +S + +N RS+R ++  +  C  L  ++E DEL P        P  Q  G+  D
Sbjct: 505  DVVCLGTSGESSNSRSTRLKSKIV--CDNLNEVIEVDELSPEMRH----PVSQTGGSLND 558

Query: 619  --SSAKARQVESDEILARQLQEQLFNESPVF-EEMDATIALSLQQEE-----------NL 756
              S  +ARQ+E+DEILAR+LQEQL+ E P+  EE+D  +A++LQQ E           N 
Sbjct: 559  DTSDVRARQLEADEILARELQEQLYQEIPIGGEEIDEHLAMALQQVEHGLLAPSRRSHNS 618

Query: 757  QRAASFLRQGQPHPRNNSTAPVYXXXXXXXXXXXXXXXXXXXXXXXXXXXMAYLRSLNRP 936
            QR  S + Q     R+ S                                    R+LN P
Sbjct: 619  QRG-SLVAQANRRTRSQSLQNPSNRTRTRVTHSARMAQIRNQFFGGSHRVSTRQRNLNFP 677

Query: 937  AR-DLETRLNFLEALEA---EFDXXXXXXXXXXXXXEFNENDYEMLLALDDNNEQ-AGAS 1101
               DL+ RL+ LEALEA   + D             +FNENDYEMLL+LD+NN + AGAS
Sbjct: 678  MHMDLDMRLDILEALEAAVGDMDDVRMNRDILHMQRDFNENDYEMLLSLDENNHRHAGAS 737

Query: 1102 QRQINTLPQSVVQSENFEEACAVCLETPSIGDTIRHLPCLHKFHKDCIDSWLKRKTSCPI 1281
              +IN+LPQS VQ+++ +EACA+CL+TP+IGD IRHLPCLHKFHKDCID WL+R+TSCP+
Sbjct: 738  TNRINSLPQSTVQTDSTQEACAICLDTPTIGDVIRHLPCLHKFHKDCIDPWLQRRTSCPV 797

Query: 1282 CKCGIT 1299
            CKC IT
Sbjct: 798  CKCSIT 803


>ref|XP_004157665.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis
            sativus]
          Length = 259

 Score =  195 bits (496), Expect = 3e-47
 Identities = 117/257 (45%), Positives = 150/257 (58%), Gaps = 19/257 (7%)
 Frame = +1

Query: 586  PDEQCYGARED--SSAKARQVESDEILARQLQEQLFNESPVF-EEMDATIALSLQQEE-- 750
            P  Q  G+  D  S  +ARQ+E+DEILAR+LQEQL+ E P+  EE+D  +A++LQQ E  
Sbjct: 4    PVSQTGGSLNDDTSDVRARQLEADEILARELQEQLYQEIPIGGEEIDEHLAMALQQVEHG 63

Query: 751  ---------NLQRAASFLRQGQPHPRNNSTAPVYXXXXXXXXXXXXXXXXXXXXXXXXXX 903
                     N QR  S + Q     R+ S                               
Sbjct: 64   LLAPSRRSHNSQRG-SLVAQANRRTRSQSLQNPSNRTRTRVTHSARMAQIRNQFFGGSHR 122

Query: 904  XMAYLRSLNRPAR-DLETRLNFLEALEA---EFDXXXXXXXXXXXXXEFNENDYEMLLAL 1071
                 R+LN P   DL+ RL+ LEALEA   + D             +FNENDYEMLL+L
Sbjct: 123  VSTRQRNLNFPMHMDLDMRLDILEALEAAVGDMDDVRMNRDILHMQRDFNENDYEMLLSL 182

Query: 1072 DDNNEQ-AGASQRQINTLPQSVVQSENFEEACAVCLETPSIGDTIRHLPCLHKFHKDCID 1248
            D+NN + AGAS  +IN+LPQS VQ+++ +EACA+CL+TP+IGD IRHLPCLHKFHKDCID
Sbjct: 183  DENNHRHAGASTNRINSLPQSTVQTDSTQEACAICLDTPTIGDVIRHLPCLHKFHKDCID 242

Query: 1249 SWLKRKTSCPICKCGIT 1299
             WL+R+TSCP+CKC IT
Sbjct: 243  PWLQRRTSCPVCKCSIT 259


>ref|NP_563717.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
            gi|15450836|gb|AAK96689.1| Unknown protein [Arabidopsis
            thaliana] gi|30725482|gb|AAP37763.1| At1g04790
            [Arabidopsis thaliana] gi|332189623|gb|AEE27744.1|
            RING/U-box domain-containing protein [Arabidopsis
            thaliana]
          Length = 634

 Score =  184 bits (468), Expect = 5e-44
 Identities = 119/324 (36%), Positives = 163/324 (50%), Gaps = 22/324 (6%)
 Frame = +1

Query: 394  RANGGECSSSTADEAEVLFVRSSAQPTNQRSSRTQNTQLHGCSLLKPILEGDELDPANIR 573
            R   G  +S+ ++E EV   RSS +P++ R  R QN   H       +LE ++  P  +R
Sbjct: 317  RRKNGFTTSTASNEPEVTVNRSSGEPSSSRPPRIQNHLRHWHGT--QVLEIEDSSP-EVR 373

Query: 574  SGVDPDEQCYGAREDSSAKARQVESDEILARQLQEQLFNESPVF--EEMDATIALSLQQE 747
                P        + S    RQ+E+DEILAR+LQEQL+ E  +   E++D  IA S++QE
Sbjct: 374  VFRGPRRV---ENDVSDVNIRQIEADEILARELQEQLYREESLIRHEQIDEIIARSMEQE 430

Query: 748  ENLQRAASFLRQ-----------GQPHPRNNSTAPVYXXXXXXXXXXXXXXXXXXXXXXX 894
            EN  RA+S                 P  R+   A +                        
Sbjct: 431  ENSLRASSSRASTRITRSSNTIAANPRGRSRLEARLQQHSSRRRFNPPQARAPVRAPARG 490

Query: 895  XXXXMAYLRSLNRPARD--------LETRLNFLEALEAEFDXXXXXXXXXXXXXEFNEND 1050
                +    +  R A +        L++R++ LE LE                 +F E+D
Sbjct: 491  RGYRLGGASASLRTALNFSFPIDMGLDSRMDILEELENAIGHSITSSNLLHMDRDFTEDD 550

Query: 1051 YEMLLALDDNNEQ-AGASQRQINTLPQSVVQSENFEEACAVCLETPSIGDTIRHLPCLHK 1227
            YE+LLALD+NN +  GAS  +IN LP+S VQ++NF+E C +CLETP IGDTIRHLPCLHK
Sbjct: 551  YELLLALDENNHRHGGASANRINNLPESTVQTDNFQETCVICLETPKIGDTIRHLPCLHK 610

Query: 1228 FHKDCIDSWLKRKTSCPICKCGIT 1299
            FHKDCID WL R  SCP+CK  +T
Sbjct: 611  FHKDCIDPWLGRSKSCPVCKSSVT 634


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