BLASTX nr result

ID: Dioscorea21_contig00007444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007444
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|1...    74   1e-11
ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_003602547.1| Photosystem I reaction center subunit N [Med...    69   3e-10
gb|ABK96256.1| unknown [Populus trichocarpa x Populus deltoides]...    69   5e-10
ref|XP_002526638.1| Photosystem I reaction center subunit N, chl...    68   7e-10

>ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|118486634|gb|ABK95154.1|
           unknown [Populus trichocarpa]
           gi|222855698|gb|EEE93245.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 7/103 (6%)
 Frame = +2

Query: 86  MAAINSSVLPCNYVLS--SGSDMSLKLAS---ISSPPVTNPKLPVIRAQQAHTVFEAKKT 250
           MAA+NSSVL CNY +S    S+++ K+ S   ++SP V+ PKLP+IRAQQA    ++K+ 
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASPVVSGPKLPIIRAQQARA--DSKEM 58

Query: 251 KGNEGRR--VXXXXXXXXXXXXXXXXXNASIFDEYLEKSKANK 373
           K +EGRR  +                 NA + ++YLEKSKANK
Sbjct: 59  KASEGRRAALVYLAATLFTSAAAAASANAGVIEDYLEKSKANK 101


>ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|222852818|gb|EEE90365.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 7/103 (6%)
 Frame = +2

Query: 86  MAAINSSVLPCNYVLS--SGSDMSLKLAS---ISSPPVTNPKLPVIRAQQAHTVFEAKKT 250
           MAA+NSSVL CNY +S    S+++ K+ S   ++S  V+ PKLPVIRAQQ  T  ++++ 
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASLVVSGPKLPVIRAQQ--TRADSREM 58

Query: 251 KGNEGRR--VXXXXXXXXXXXXXXXXXNASIFDEYLEKSKANK 373
           K +EGRR  +                 NA + +EYLEKSKANK
Sbjct: 59  KASEGRRAAMVYLAATLFTSAAAASSANAGVIEEYLEKSKANK 101


>ref|XP_003602547.1| Photosystem I reaction center subunit N [Medicago truncatula]
           gi|355491595|gb|AES72798.1| Photosystem I reaction
           center subunit N [Medicago truncatula]
           gi|388492560|gb|AFK34346.1| unknown [Medicago
           truncatula]
          Length = 172

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 7/103 (6%)
 Frame = +2

Query: 86  MAAINSSVLPCNYVLSSGSDMSLKLASI---SSPPVTNPKLPVIRAQQAHTVFEAKKTKG 256
           MAA+NSSVL C+Y +S GS+++ KL S+   +SP V+  KLP+I+AQQ   + EAK+++ 
Sbjct: 1   MAAMNSSVLACSYAIS-GSELNAKLISVPSAASPGVSGIKLPLIKAQQVR-IPEAKESRA 58

Query: 257 NEGRR----VXXXXXXXXXXXXXXXXXNASIFDEYLEKSKANK 373
           ++GRR    +                 NA + +EYLEKSKANK
Sbjct: 59  SDGRRNALALLAATLFTTAVSASNSSANAGVIEEYLEKSKANK 101


>gb|ABK96256.1| unknown [Populus trichocarpa x Populus deltoides]
           gi|118489284|gb|ABK96447.1| unknown [Populus trichocarpa
           x Populus deltoides]
          Length = 172

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
 Frame = +2

Query: 86  MAAINSSVLPCNYVLS--SGSDMSLKLAS---ISSPPVTNPKLPVIRAQQAHTVFEAKKT 250
           MAA+NSSVL CNY +S    S+++ K+ S   ++S  V  PKLPVIRAQQ  T  ++++ 
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASLVVCGPKLPVIRAQQ--TRADSREM 58

Query: 251 KGNEGRR--VXXXXXXXXXXXXXXXXXNASIFDEYLEKSKANK 373
           K +EGRR  +                 NA + +EYLEKSKANK
Sbjct: 59  KASEGRRAAMVYLAATLFTSAAAASSANAGVIEEYLEKSKANK 101


>ref|XP_002526638.1| Photosystem I reaction center subunit N, chloroplast precursor,
           putative [Ricinus communis] gi|223534030|gb|EEF35750.1|
           Photosystem I reaction center subunit N, chloroplast
           precursor, putative [Ricinus communis]
          Length = 169

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 46/102 (45%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
 Frame = +2

Query: 86  MAAINSSVLPCNYVLSSGSDMSL-KLASISS---PPVTNPKLPVIRAQQAHTVFEAKKTK 253
           MAA+NSSVL CNY +S  +   L KLAS+ S   P V+ PKLPVIRAQ+A    ++K   
Sbjct: 1   MAAMNSSVLACNYAISGTASSELSKLASVPSAVFPTVSGPKLPVIRAQRAKPASDSKA-- 58

Query: 254 GNEGRR--VXXXXXXXXXXXXXXXXXNASIFDEYLEKSKANK 373
             +GRR  +                 NA + +EYLEKSKANK
Sbjct: 59  --DGRRAAMLCLAATLFTTAAAVSSANAGVIEEYLEKSKANK 98


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