BLASTX nr result
ID: Dioscorea21_contig00007444
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00007444 (374 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|1... 74 1e-11 ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|2... 69 3e-10 ref|XP_003602547.1| Photosystem I reaction center subunit N [Med... 69 3e-10 gb|ABK96256.1| unknown [Populus trichocarpa x Populus deltoides]... 69 5e-10 ref|XP_002526638.1| Photosystem I reaction center subunit N, chl... 68 7e-10 >ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|118486634|gb|ABK95154.1| unknown [Populus trichocarpa] gi|222855698|gb|EEE93245.1| predicted protein [Populus trichocarpa] Length = 172 Score = 74.3 bits (181), Expect = 1e-11 Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 7/103 (6%) Frame = +2 Query: 86 MAAINSSVLPCNYVLS--SGSDMSLKLAS---ISSPPVTNPKLPVIRAQQAHTVFEAKKT 250 MAA+NSSVL CNY +S S+++ K+ S ++SP V+ PKLP+IRAQQA ++K+ Sbjct: 1 MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASPVVSGPKLPIIRAQQARA--DSKEM 58 Query: 251 KGNEGRR--VXXXXXXXXXXXXXXXXXNASIFDEYLEKSKANK 373 K +EGRR + NA + ++YLEKSKANK Sbjct: 59 KASEGRRAALVYLAATLFTSAAAAASANAGVIEDYLEKSKANK 101 >ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|222852818|gb|EEE90365.1| predicted protein [Populus trichocarpa] Length = 172 Score = 69.3 bits (168), Expect = 3e-10 Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 7/103 (6%) Frame = +2 Query: 86 MAAINSSVLPCNYVLS--SGSDMSLKLAS---ISSPPVTNPKLPVIRAQQAHTVFEAKKT 250 MAA+NSSVL CNY +S S+++ K+ S ++S V+ PKLPVIRAQQ T ++++ Sbjct: 1 MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASLVVSGPKLPVIRAQQ--TRADSREM 58 Query: 251 KGNEGRR--VXXXXXXXXXXXXXXXXXNASIFDEYLEKSKANK 373 K +EGRR + NA + +EYLEKSKANK Sbjct: 59 KASEGRRAAMVYLAATLFTSAAAASSANAGVIEEYLEKSKANK 101 >ref|XP_003602547.1| Photosystem I reaction center subunit N [Medicago truncatula] gi|355491595|gb|AES72798.1| Photosystem I reaction center subunit N [Medicago truncatula] gi|388492560|gb|AFK34346.1| unknown [Medicago truncatula] Length = 172 Score = 69.3 bits (168), Expect = 3e-10 Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 7/103 (6%) Frame = +2 Query: 86 MAAINSSVLPCNYVLSSGSDMSLKLASI---SSPPVTNPKLPVIRAQQAHTVFEAKKTKG 256 MAA+NSSVL C+Y +S GS+++ KL S+ +SP V+ KLP+I+AQQ + EAK+++ Sbjct: 1 MAAMNSSVLACSYAIS-GSELNAKLISVPSAASPGVSGIKLPLIKAQQVR-IPEAKESRA 58 Query: 257 NEGRR----VXXXXXXXXXXXXXXXXXNASIFDEYLEKSKANK 373 ++GRR + NA + +EYLEKSKANK Sbjct: 59 SDGRRNALALLAATLFTTAVSASNSSANAGVIEEYLEKSKANK 101 >gb|ABK96256.1| unknown [Populus trichocarpa x Populus deltoides] gi|118489284|gb|ABK96447.1| unknown [Populus trichocarpa x Populus deltoides] Length = 172 Score = 68.6 bits (166), Expect = 5e-10 Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 7/103 (6%) Frame = +2 Query: 86 MAAINSSVLPCNYVLS--SGSDMSLKLAS---ISSPPVTNPKLPVIRAQQAHTVFEAKKT 250 MAA+NSSVL CNY +S S+++ K+ S ++S V PKLPVIRAQQ T ++++ Sbjct: 1 MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASLVVCGPKLPVIRAQQ--TRADSREM 58 Query: 251 KGNEGRR--VXXXXXXXXXXXXXXXXXNASIFDEYLEKSKANK 373 K +EGRR + NA + +EYLEKSKANK Sbjct: 59 KASEGRRAAMVYLAATLFTSAAAASSANAGVIEEYLEKSKANK 101 >ref|XP_002526638.1| Photosystem I reaction center subunit N, chloroplast precursor, putative [Ricinus communis] gi|223534030|gb|EEF35750.1| Photosystem I reaction center subunit N, chloroplast precursor, putative [Ricinus communis] Length = 169 Score = 68.2 bits (165), Expect = 7e-10 Identities = 46/102 (45%), Positives = 58/102 (56%), Gaps = 6/102 (5%) Frame = +2 Query: 86 MAAINSSVLPCNYVLSSGSDMSL-KLASISS---PPVTNPKLPVIRAQQAHTVFEAKKTK 253 MAA+NSSVL CNY +S + L KLAS+ S P V+ PKLPVIRAQ+A ++K Sbjct: 1 MAAMNSSVLACNYAISGTASSELSKLASVPSAVFPTVSGPKLPVIRAQRAKPASDSKA-- 58 Query: 254 GNEGRR--VXXXXXXXXXXXXXXXXXNASIFDEYLEKSKANK 373 +GRR + NA + +EYLEKSKANK Sbjct: 59 --DGRRAAMLCLAATLFTTAAAVSSANAGVIEEYLEKSKANK 98