BLASTX nr result

ID: Dioscorea21_contig00007430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007430
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316180.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002311257.1| predicted protein [Populus trichocarpa] gi|1...   105   5e-21
ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [G...   104   7e-21
ref|XP_003543572.1| PREDICTED: 60S ribosomal protein L38 [Glycin...   104   7e-21
emb|CBI17596.3| unnamed protein product [Vitis vinifera]              104   9e-21

>ref|XP_002316180.1| predicted protein [Populus trichocarpa]
           gi|224133246|ref|XP_002327996.1| predicted protein
           [Populus trichocarpa] gi|356512333|ref|XP_003524874.1|
           PREDICTED: 60S ribosomal protein L38-like [Glycine max]
           gi|356525108|ref|XP_003531169.1| PREDICTED: 60S
           ribosomal protein L38-like [Glycine max]
           gi|356549134|ref|XP_003542952.1| PREDICTED: 60S
           ribosomal protein L38 [Glycine max]
           gi|356555492|ref|XP_003546065.1| PREDICTED: 60S
           ribosomal protein L38-like [Glycine max]
           gi|118482000|gb|ABK92931.1| unknown [Populus
           trichocarpa] gi|118483885|gb|ABK93833.1| unknown
           [Populus trichocarpa] gi|222837405|gb|EEE75784.1|
           predicted protein [Populus trichocarpa]
           gi|222865220|gb|EEF02351.1| predicted protein [Populus
           trichocarpa] gi|255626373|gb|ACU13531.1| unknown
           [Glycine max]
          Length = 69

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/69 (76%), Positives = 54/69 (78%)
 Frame = +2

Query: 8   MPKQIHEIKDFLLTARRKDARXXXXXXXXXXXXXXXRCSKYLYTLCVFDPEKADKLKQSL 187
           MPKQIHEIKDFLLTARRKDAR               RCSKYLYTLCVFDPEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60

Query: 188 PPGLSVQDV 214
           PPGLSVQD+
Sbjct: 61  PPGLSVQDL 69


>ref|XP_002311257.1| predicted protein [Populus trichocarpa] gi|118487733|gb|ABK95690.1|
           unknown [Populus trichocarpa]
           gi|222851077|gb|EEE88624.1| predicted protein [Populus
           trichocarpa]
          Length = 69

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/69 (75%), Positives = 54/69 (78%)
 Frame = +2

Query: 8   MPKQIHEIKDFLLTARRKDARXXXXXXXXXXXXXXXRCSKYLYTLCVFDPEKADKLKQSL 187
           MPKQIHEIKDFLLTARRKDAR               RCSKYLYTLCVFDPEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRRRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60

Query: 188 PPGLSVQDV 214
           PPGLSVQ++
Sbjct: 61  PPGLSVQEL 69


>ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [Glycine max]
          Length = 100

 Score =  104 bits (260), Expect = 7e-21
 Identities = 53/69 (76%), Positives = 53/69 (76%)
 Frame = +2

Query: 8   MPKQIHEIKDFLLTARRKDARXXXXXXXXXXXXXXXRCSKYLYTLCVFDPEKADKLKQSL 187
           MPKQIHEIKDFLLTARRKDAR               RCSKYLYTLCVFD EKADKLKQSL
Sbjct: 32  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 91

Query: 188 PPGLSVQDV 214
           PPGLSVQDV
Sbjct: 92  PPGLSVQDV 100


>ref|XP_003543572.1| PREDICTED: 60S ribosomal protein L38 [Glycine max]
          Length = 69

 Score =  104 bits (260), Expect = 7e-21
 Identities = 53/69 (76%), Positives = 53/69 (76%)
 Frame = +2

Query: 8   MPKQIHEIKDFLLTARRKDARXXXXXXXXXXXXXXXRCSKYLYTLCVFDPEKADKLKQSL 187
           MPKQIHEIKDFLLTARRKDAR               RCSKYLYTLCVFD EKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 188 PPGLSVQDV 214
           PPGLSVQDV
Sbjct: 61  PPGLSVQDV 69


>emb|CBI17596.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score =  104 bits (259), Expect = 9e-21
 Identities = 52/71 (73%), Positives = 55/71 (77%)
 Frame = +2

Query: 2   AEMPKQIHEIKDFLLTARRKDARXXXXXXXXXXXXXXXRCSKYLYTLCVFDPEKADKLKQ 181
           ++MPKQIHEIKDFLLTARRKDAR               RCSKYLYTLCVFD EKADKLKQ
Sbjct: 57  SKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQ 116

Query: 182 SLPPGLSVQDV 214
           SLPPGLSVQD+
Sbjct: 117 SLPPGLSVQDL 127


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