BLASTX nr result

ID: Dioscorea21_contig00007423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007423
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002461445.1| hypothetical protein SORBIDRAFT_02g002790 [S...   107   1e-21
ref|NP_001147777.1| nucleolar RNA helicase 2 [Zea mays] gi|19561...   107   1e-21
gb|ACF87431.1| unknown [Zea mays]                                     107   1e-21
emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]   106   2e-21
sp|Q0D8N0.2|RH53_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ...   105   4e-21

>ref|XP_002461445.1| hypothetical protein SORBIDRAFT_02g002790 [Sorghum bicolor]
           gi|241924822|gb|EER97966.1| hypothetical protein
           SORBIDRAFT_02g002790 [Sorghum bicolor]
          Length = 602

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/69 (72%), Positives = 58/69 (84%)
 Frame = -2

Query: 478 IHYELPNTSELFVHRSGRTGRAGKKGSAILIYSPEQTRAVRGIEGDVGCRFTELPRIAAE 299
           +HYE+PNTSELFVHRSGRT RAGKKGSAILIY+ EQTRAVR IE D+GCRFTELP++   
Sbjct: 402 VHYEIPNTSELFVHRSGRTARAGKKGSAILIYTYEQTRAVRVIEQDIGCRFTELPKMPVS 461

Query: 298 DAGDDMLSM 272
           D   DM ++
Sbjct: 462 DEAADMFNV 470


>ref|NP_001147777.1| nucleolar RNA helicase 2 [Zea mays] gi|195613718|gb|ACG28689.1|
           nucleolar RNA helicase 2 [Zea mays]
          Length = 613

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/69 (72%), Positives = 58/69 (84%)
 Frame = -2

Query: 478 IHYELPNTSELFVHRSGRTGRAGKKGSAILIYSPEQTRAVRGIEGDVGCRFTELPRIAAE 299
           +HYE+PNTSELFVHRSGRT RAGKKGSAILIY+ EQTRAVR IE D+GCRFTELP++   
Sbjct: 411 VHYEIPNTSELFVHRSGRTARAGKKGSAILIYTYEQTRAVRVIEQDIGCRFTELPKMPVS 470

Query: 298 DAGDDMLSM 272
           D   DM ++
Sbjct: 471 DEAADMFNV 479


>gb|ACF87431.1| unknown [Zea mays]
          Length = 255

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/69 (72%), Positives = 58/69 (84%)
 Frame = -2

Query: 478 IHYELPNTSELFVHRSGRTGRAGKKGSAILIYSPEQTRAVRGIEGDVGCRFTELPRIAAE 299
           +HYE+PNTSELFVHRSGRT RAGKKGSAILIY+ EQTRAVR IE D+GCRFTELP++   
Sbjct: 53  VHYEIPNTSELFVHRSGRTARAGKKGSAILIYTYEQTRAVRVIEQDIGCRFTELPKMPVS 112

Query: 298 DAGDDMLSM 272
           D   DM ++
Sbjct: 113 DEAADMFNV 121


>emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]
          Length = 666

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/68 (73%), Positives = 58/68 (85%)
 Frame = -2

Query: 478 IHYELPNTSELFVHRSGRTGRAGKKGSAILIYSPEQTRAVRGIEGDVGCRFTELPRIAAE 299
           IHYELPN+SE+FVHRSGRTGRAGKKG+AILIY+ +Q R VR IE D+GC+F+ELPRIA E
Sbjct: 432 IHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDIGCKFSELPRIAIE 491

Query: 298 DAGDDMLS 275
               DMLS
Sbjct: 492 GGSRDMLS 499


>sp|Q0D8N0.2|RH53_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 53
           gi|218199081|gb|EEC81508.1| hypothetical protein
           OsI_24871 [Oryza sativa Indica Group]
           gi|222636421|gb|EEE66553.1| hypothetical protein
           OsJ_23067 [Oryza sativa Japonica Group]
          Length = 602

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/69 (72%), Positives = 57/69 (82%)
 Frame = -2

Query: 478 IHYELPNTSELFVHRSGRTGRAGKKGSAILIYSPEQTRAVRGIEGDVGCRFTELPRIAAE 299
           IHYELPNTSELFVHRSGRT RAGKKGSAILIY+ +Q RAVR IE D+GC+FTELP+I   
Sbjct: 400 IHYELPNTSELFVHRSGRTARAGKKGSAILIYTNDQARAVRIIEQDIGCKFTELPKIEVA 459

Query: 298 DAGDDMLSM 272
           D   DM ++
Sbjct: 460 DEASDMFNV 468


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