BLASTX nr result

ID: Dioscorea21_contig00007413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007413
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGB07440.1| biotin carboxylase [Persea americana]                  341   2e-91
ref|XP_002308127.1| predicted protein [Populus trichocarpa] gi|2...   341   2e-91
gb|ACZ06066.1| biotin carboxylase [Arachis hypogaea]                  339   8e-91
gb|ABF74732.1| acetyl-CoA carboxylase [Elaeis guineensis]             338   1e-90
gb|AAC41659.1| biotin carboxylase subunit [Nicotiana tabacum] gi...   338   1e-90

>gb|AGB07440.1| biotin carboxylase [Persea americana]
          Length = 527

 Score =  341 bits (874), Expect = 2e-91
 Identities = 171/197 (86%), Positives = 182/197 (92%)
 Frame = -3

Query: 1062 RQRAAHVTRKSKSCGGGALNATCRDEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDK 883
            R RAA++++K     GGALNATCRDEKILVANRGEIAVRVIRTAHEMGIPCVA YSTID+
Sbjct: 41   RNRAAYLSKKL----GGALNATCRDEKILVANRGEIAVRVIRTAHEMGIPCVAAYSTIDQ 96

Query: 882  DALHVKLADEAVCIGEAPSSQSYLFVPNVLSAAVSRRCTMLHPGYGFLAENAGFVDICHE 703
            DALHV+LADEAVCIGEAPSSQSYLF+PNVLSAAVSR CTMLHPGYGFLAENA FVD+C E
Sbjct: 97   DALHVRLADEAVCIGEAPSSQSYLFIPNVLSAAVSRECTMLHPGYGFLAENATFVDMCKE 156

Query: 702  HGINFIGPNSDSIRVMGDKSTARETMKKAGVPTVPGSDGLLQSTEEGIKLADEIGYPVMI 523
            HGINFIGPN  SIRVMGDK+TARETMKKAGVPTVPGS+GLLQSTEE IKLA EIG+PVMI
Sbjct: 157  HGINFIGPNPGSIRVMGDKATARETMKKAGVPTVPGSEGLLQSTEEAIKLAHEIGFPVMI 216

Query: 522  KATAGGGGRGMRLAKEP 472
            KATAGGGGRGMRLA EP
Sbjct: 217  KATAGGGGRGMRLANEP 233



 Score =  203 bits (517), Expect = 5e-50
 Identities = 104/112 (92%), Positives = 105/112 (93%)
 Frame = -2

Query: 337 GNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDXXXXXXASIGYIGVGTVEFLL 158
           GNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGD      ASIGYIGVGTVEFLL
Sbjct: 278 GNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLL 337

Query: 157 DERGSFYFMEMNTRIQVEHPVTEMISSTDLIEEQIRVALGERLTYKQEDIVL 2
           DERGSFYFMEMNTRIQVEHPVTEMISSTDLIEEQIRVALG+RL YKQEDIVL
Sbjct: 338 DERGSFYFMEMNTRIQVEHPVTEMISSTDLIEEQIRVALGDRLEYKQEDIVL 389


>ref|XP_002308127.1| predicted protein [Populus trichocarpa]
            gi|290463112|sp|B9HBA8.1|ACCC1_POPTR RecName: Full=Biotin
            carboxylase 1, chloroplastic; AltName: Full=Acetyl-CoA
            carboxylase subunit A 1; Short=ACC; Flags: Precursor
            gi|222854103|gb|EEE91650.1| predicted protein [Populus
            trichocarpa]
          Length = 528

 Score =  341 bits (874), Expect = 2e-91
 Identities = 174/199 (87%), Positives = 182/199 (91%), Gaps = 2/199 (1%)
 Frame = -3

Query: 1062 RQRA--AHVTRKSKSCGGGALNATCRDEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 889
            RQRA  AHV        GGAL  TCR EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI
Sbjct: 42   RQRAQTAHVHCAKN---GGALGVTCRAEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTI 98

Query: 888  DKDALHVKLADEAVCIGEAPSSQSYLFVPNVLSAAVSRRCTMLHPGYGFLAENAGFVDIC 709
            DKDALHVKLADE+VCIGEAPSSQSYL +PNVLSAA+SRRCTMLHPGYGFLAENA FV++C
Sbjct: 99   DKDALHVKLADESVCIGEAPSSQSYLVIPNVLSAAISRRCTMLHPGYGFLAENAVFVEMC 158

Query: 708  HEHGINFIGPNSDSIRVMGDKSTARETMKKAGVPTVPGSDGLLQSTEEGIKLADEIGYPV 529
             EHGINFIGPN DSIRVMGDKSTARETMKKAGVPTVPGSDGLLQSTEEG++LA+EIGYPV
Sbjct: 159  REHGINFIGPNPDSIRVMGDKSTARETMKKAGVPTVPGSDGLLQSTEEGVRLANEIGYPV 218

Query: 528  MIKATAGGGGRGMRLAKEP 472
            MIKATAGGGGRGMRLAKEP
Sbjct: 219  MIKATAGGGGRGMRLAKEP 237



 Score =  201 bits (510), Expect = 3e-49
 Identities = 102/112 (91%), Positives = 104/112 (92%)
 Frame = -2

Query: 337 GNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDXXXXXXASIGYIGVGTVEFLL 158
           GNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGD      ASIGYIGVGTVEFLL
Sbjct: 282 GNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVSAAASIGYIGVGTVEFLL 341

Query: 157 DERGSFYFMEMNTRIQVEHPVTEMISSTDLIEEQIRVALGERLTYKQEDIVL 2
           DERGSFYFMEMNTRIQVEHPVTEMISS DLIEEQIRVA+GE+L YKQEDIVL
Sbjct: 342 DERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIRVAMGEKLRYKQEDIVL 393


>gb|ACZ06066.1| biotin carboxylase [Arachis hypogaea]
          Length = 540

 Score =  339 bits (869), Expect = 8e-91
 Identities = 172/203 (84%), Positives = 186/203 (91%), Gaps = 3/203 (1%)
 Frame = -3

Query: 1071 SLRRQRAAHVT--RKSKSCG-GGALNATCRDEKILVANRGEIAVRVIRTAHEMGIPCVAV 901
            S  RQR +HVT  R ++  G GGAL ATC+ EKILVANRGEIAVRVIRTAHEMGIPCVAV
Sbjct: 46   SFPRQRCSHVTKTRAARDGGAGGALGATCQAEKILVANRGEIAVRVIRTAHEMGIPCVAV 105

Query: 900  YSTIDKDALHVKLADEAVCIGEAPSSQSYLFVPNVLSAAVSRRCTMLHPGYGFLAENAGF 721
            YSTIDKDALHVKLAD+AVCIGEAPSSQSYL +PNVLSAA+SRRCTMLHPG GFLAENA F
Sbjct: 106  YSTIDKDALHVKLADDAVCIGEAPSSQSYLLIPNVLSAAISRRCTMLHPGCGFLAENAVF 165

Query: 720  VDICHEHGINFIGPNSDSIRVMGDKSTARETMKKAGVPTVPGSDGLLQSTEEGIKLADEI 541
            V++C EHGINFIGPN DSIRVMGDKSTAR+TMKKAGVPTVPGSDGLLQ+TEE I+LA+EI
Sbjct: 166  VEMCREHGINFIGPNPDSIRVMGDKSTARDTMKKAGVPTVPGSDGLLQTTEEAIRLANEI 225

Query: 540  GYPVMIKATAGGGGRGMRLAKEP 472
            G+PVMIKATAGGGGRGMRLAKEP
Sbjct: 226  GFPVMIKATAGGGGRGMRLAKEP 248



 Score =  198 bits (503), Expect = 2e-48
 Identities = 101/112 (90%), Positives = 103/112 (91%)
 Frame = -2

Query: 337 GNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDXXXXXXASIGYIGVGTVEFLL 158
           GNVVHFG RDCSIQRRNQKLLEEAPSPALTPELRKAMGD      ASIGYIGVGTVEFLL
Sbjct: 293 GNVVHFGGRDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLL 352

Query: 157 DERGSFYFMEMNTRIQVEHPVTEMISSTDLIEEQIRVALGERLTYKQEDIVL 2
           DERGSFYFMEMNTRIQVEHPVTEMISS DLIEEQIRVA+GE+L YKQEDIVL
Sbjct: 353 DERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIRVAMGEKLRYKQEDIVL 404


>gb|ABF74732.1| acetyl-CoA carboxylase [Elaeis guineensis]
          Length = 536

 Score =  338 bits (867), Expect = 1e-90
 Identities = 167/182 (91%), Positives = 174/182 (95%)
 Frame = -3

Query: 1017 GGALNATCRDEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADEAVCIG 838
            GGALNATC DEKILVANRGEIAVRVIR AHEMGIPCVAV+STID+DALHV+LADEAVCIG
Sbjct: 60   GGALNATCCDEKILVANRGEIAVRVIRAAHEMGIPCVAVHSTIDQDALHVRLADEAVCIG 119

Query: 837  EAPSSQSYLFVPNVLSAAVSRRCTMLHPGYGFLAENAGFVDICHEHGINFIGPNSDSIRV 658
            EAPSSQSYLF+PNVLSAAVSR CTMLHPGYGFLAENAGFVDIC EHGINFIGPN DSIRV
Sbjct: 120  EAPSSQSYLFIPNVLSAAVSRGCTMLHPGYGFLAENAGFVDICKEHGINFIGPNPDSIRV 179

Query: 657  MGDKSTARETMKKAGVPTVPGSDGLLQSTEEGIKLADEIGYPVMIKATAGGGGRGMRLAK 478
            MGDKSTARETMKKAGVPTVPGSDGLLQSTEE +KLA E+G+PVMIKATAGGGGRGMRLA 
Sbjct: 180  MGDKSTARETMKKAGVPTVPGSDGLLQSTEEAVKLAHEVGFPVMIKATAGGGGRGMRLAY 239

Query: 477  EP 472
            EP
Sbjct: 240  EP 241



 Score =  191 bits (484), Expect = 3e-46
 Identities = 101/113 (89%), Positives = 101/113 (89%), Gaps = 1/113 (0%)
 Frame = -2

Query: 337 GNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDXXXXXXASIGYIGVGTV-EFL 161
           GNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGD      ASIGYIG      FL
Sbjct: 286 GNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGGWNCGNFL 345

Query: 160 LDERGSFYFMEMNTRIQVEHPVTEMISSTDLIEEQIRVALGERLTYKQEDIVL 2
           LDERGSFYFMEMNTRIQVEHPVTEMISSTDLIEEQIRVALGERLTYKQEDIVL
Sbjct: 346 LDERGSFYFMEMNTRIQVEHPVTEMISSTDLIEEQIRVALGERLTYKQEDIVL 398


>gb|AAC41659.1| biotin carboxylase subunit [Nicotiana tabacum]
            gi|1582354|prf||2118337A Ac-CoA
            carboxylase:SUBUNIT=biotin carboxylase
          Length = 536

 Score =  338 bits (867), Expect = 1e-90
 Identities = 170/198 (85%), Positives = 183/198 (92%)
 Frame = -3

Query: 1065 RRQRAAHVTRKSKSCGGGALNATCRDEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID 886
            +R +A  V+ KS S  GGAL ATCR EKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID
Sbjct: 47   QRAQAYRVSTKS-STRGGALAATCRAEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTID 105

Query: 885  KDALHVKLADEAVCIGEAPSSQSYLFVPNVLSAAVSRRCTMLHPGYGFLAENAGFVDICH 706
            KDALHVKLADE+VCIGEAPS+QSYL +PNVLSAA+SR CTMLHPGYGFLAENA FV++C 
Sbjct: 106  KDALHVKLADESVCIGEAPSNQSYLVIPNVLSAAISRGCTMLHPGYGFLAENAVFVEMCR 165

Query: 705  EHGINFIGPNSDSIRVMGDKSTARETMKKAGVPTVPGSDGLLQSTEEGIKLADEIGYPVM 526
            EHGINFIGPN DSIRVMGDKSTAR+TMK AGVPTVPGSDGLLQSTEEG++LA+EIGYPVM
Sbjct: 166  EHGINFIGPNPDSIRVMGDKSTARDTMKNAGVPTVPGSDGLLQSTEEGVRLAEEIGYPVM 225

Query: 525  IKATAGGGGRGMRLAKEP 472
            IKATAGGGGRGMRLAKEP
Sbjct: 226  IKATAGGGGRGMRLAKEP 243



 Score =  199 bits (505), Expect = 1e-48
 Identities = 101/112 (90%), Positives = 103/112 (91%)
 Frame = -2

Query: 337 GNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDXXXXXXASIGYIGVGTVEFLL 158
           GNVVHFGERDCSIQRRNQKLLEEAPSPALTPELR AMGD      ASIGYIGVGTVEFLL
Sbjct: 288 GNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRNAMGDAAVAAAASIGYIGVGTVEFLL 347

Query: 157 DERGSFYFMEMNTRIQVEHPVTEMISSTDLIEEQIRVALGERLTYKQEDIVL 2
           DERGSFYFMEMNTRIQVEHPVTEMISS DLIEEQIRVA+GE+L YKQEDIVL
Sbjct: 348 DERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIRVAMGEKLRYKQEDIVL 399


Top