BLASTX nr result
ID: Dioscorea21_contig00007407
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00007407
(1193 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001051937.1| Os03g0854300 [Oryza sativa Japonica Group] g... 361 2e-97
ref|XP_003560359.1| PREDICTED: RNA-binding protein 34-like [Brac... 360 4e-97
gb|EAY92637.1| hypothetical protein OsI_14381 [Oryza sativa Indi... 359 7e-97
dbj|BAK01022.1| predicted protein [Hordeum vulgare subsp. vulgare] 359 9e-97
ref|XP_002466077.1| hypothetical protein SORBIDRAFT_01g000750 [S... 351 2e-94
>ref|NP_001051937.1| Os03g0854300 [Oryza sativa Japonica Group] gi|29126350|gb|AAO66542.1|
expressed protein [Oryza sativa Japonica Group]
gi|108712166|gb|ABF99961.1| RNA recognition motif,
putative, expressed [Oryza sativa Japonica Group]
gi|113550408|dbj|BAF13851.1| Os03g0854300 [Oryza sativa
Japonica Group] gi|125588687|gb|EAZ29351.1| hypothetical
protein OsJ_13417 [Oryza sativa Japonica Group]
gi|215706962|dbj|BAG93422.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 441
Score = 361 bits (926), Expect = 2e-97
Identities = 198/324 (61%), Positives = 234/324 (72%), Gaps = 4/324 (1%)
Frame = +3
Query: 39 KLLRTVFVGNLPLRTKKKALMKEFGRFGEIESVRIRSVPLLDSKIPRKGAVIKGKINESV 218
KLLRTVFVGNLPL+TK+KAL KEF FGEIESVRIRSVPL D+KIPRKGAVIKGKIN+SV
Sbjct: 124 KLLRTVFVGNLPLKTKRKALTKEFAAFGEIESVRIRSVPLTDTKIPRKGAVIKGKINDSV 183
Query: 219 DSVHAYIVFKQEQSANAALSHNMAEVGGNHIRVDMACPPRKKLKGASPLYDRKRTVFVGN 398
D+VHAYIVFK EQ A AALSHNMA GNH+RVDMACPPRKKLKG PLYDRKRTVFVGN
Sbjct: 184 DNVHAYIVFKDEQGARAALSHNMALFDGNHVRVDMACPPRKKLKGEGPLYDRKRTVFVGN 243
Query: 399 LPFDVKDEELYRLFSGTSQSDSGLEAVRVIRDPNTSLGKGIAYVLFKTRDAANSVVRQKN 578
LPFD+KDEE+Y+ F G+S S+ +EA+RV+RDP+TSLGKGIAYVLFKTR+AAN+VVR+++
Sbjct: 244 LPFDIKDEEVYQKFCGSSGSEGDVEAIRVVRDPDTSLGKGIAYVLFKTREAANTVVRKQD 303
Query: 579 LKIRDRLLRVCHAKA--ETPTTNTXXXXXXXXXXXXXXXXRFALSSGEASPGSKDNKPKA 752
KIRDRLLR+ HAK+ TP T + AL+ S D K K
Sbjct: 304 FKIRDRLLRLAHAKSADATPKKTT-----DAGKTKGGSKHKTALTPSSKSHEGSD-KTKR 357
Query: 753 KAASLSYQGIRASKSGVLKKTGVPRRPTGNTKHEANKAGRAEQKTS-KTKRP-XXXXXXX 926
KA++LSYQG+RASKSGV+KK V +RP+ K + + +S K KRP
Sbjct: 358 KASTLSYQGLRASKSGVVKKAKVSQRPSYQGKQQGRTSETGHDASSQKAKRPAVAARKAK 417
Query: 927 XXXXXXXXEGGTPENTRRNKKARK 998
+ TPENT R+KKA+K
Sbjct: 418 QLAKKRKLDAQTPENTHRSKKAKK 441
>ref|XP_003560359.1| PREDICTED: RNA-binding protein 34-like [Brachypodium distachyon]
Length = 461
Score = 360 bits (924), Expect = 4e-97
Identities = 200/328 (60%), Positives = 229/328 (69%), Gaps = 8/328 (2%)
Frame = +3
Query: 39 KLLRTVFVGNLPLRTKKKALMKEFGRFGEIESVRIRSVPLLDSKIPRKGAVIKGKINESV 218
KLLRTVFVGNLPLRTKKKAL KEF FGE+ESVRIRSVPL D+KIPRKGAVIKGKIN+ V
Sbjct: 143 KLLRTVFVGNLPLRTKKKALTKEFAAFGEVESVRIRSVPLGDTKIPRKGAVIKGKINDLV 202
Query: 219 DSVHAYIVFKQEQSANAALSHNMAEVGGNHIRVDMACPPRKKLKGASPLYDRKRTVFVGN 398
D+VHAYIVFK EQ A AALSHNMA GNHIRVDMACPPRKKL+G PLYDRKRTVFVGN
Sbjct: 203 DNVHAYIVFKDEQCARAALSHNMALFNGNHIRVDMACPPRKKLRGEGPLYDRKRTVFVGN 262
Query: 399 LPFDVKDEELYRLFSGTSQSDSGLEAVRVIRDPNTSLGKGIAYVLFKTRDAANSVVRQKN 578
LPFDVKDEELY++F G S +EA+RV+RDP++SLGKGIAYVLFKTR+AANSVVR+++
Sbjct: 263 LPFDVKDEELYKMFCGPSGPQGDVEAIRVVRDPDSSLGKGIAYVLFKTREAANSVVRKRD 322
Query: 579 LKIRDRLLRVCHAKAETPTTNTXXXXXXXXXXXXXXXXRFALSSGEASPGSK----DNKP 746
LKIRDRLLR+ HAKA T ++PGSK +
Sbjct: 323 LKIRDRLLRLTHAKAADATPKKTDAGKTHGGPR---------QKTVSTPGSKSRDGSDST 373
Query: 747 KAKAASLSYQGIRASKSGVLKKTGVPRRPTGNTKHEANKAGRAEQKTS--KTKRPXXXXX 920
K KA+SLSYQG++ASKSGV+KK V + P+ K + Q S KTKRP
Sbjct: 374 KRKASSLSYQGLKASKSGVVKKAKVIQHPSNQGKQPQGRTSETGQTDSARKTKRPAVAAR 433
Query: 921 XXXXXXXXXXEGG--TPENTRRNKKARK 998
G TP+NT R+KKARK
Sbjct: 434 KAKQLTKKRKLDGSRTPDNTHRSKKARK 461
>gb|EAY92637.1| hypothetical protein OsI_14381 [Oryza sativa Indica Group]
Length = 441
Score = 359 bits (922), Expect = 7e-97
Identities = 197/324 (60%), Positives = 234/324 (72%), Gaps = 4/324 (1%)
Frame = +3
Query: 39 KLLRTVFVGNLPLRTKKKALMKEFGRFGEIESVRIRSVPLLDSKIPRKGAVIKGKINESV 218
KLLRTVFVGNLPL+TK+KAL KEF FGEIESVRIRSVPL D+KIPRKGAVIKGKIN+SV
Sbjct: 124 KLLRTVFVGNLPLKTKRKALTKEFAAFGEIESVRIRSVPLTDTKIPRKGAVIKGKINDSV 183
Query: 219 DSVHAYIVFKQEQSANAALSHNMAEVGGNHIRVDMACPPRKKLKGASPLYDRKRTVFVGN 398
D+VHAYIVFK EQ A AALSHNMA GNH+RVDMACPPRKKLKG PLYDRKRTVFVGN
Sbjct: 184 DNVHAYIVFKDEQGARAALSHNMALFDGNHVRVDMACPPRKKLKGEGPLYDRKRTVFVGN 243
Query: 399 LPFDVKDEELYRLFSGTSQSDSGLEAVRVIRDPNTSLGKGIAYVLFKTRDAANSVVRQKN 578
LPFD+KDEE+Y+ F G+S S+ +EA+RV+RDP+TSLGKGIAYVLFKTR+AAN+VVR+++
Sbjct: 244 LPFDIKDEEVYQKFCGSSGSEGDVEAIRVVRDPDTSLGKGIAYVLFKTREAANTVVRKQD 303
Query: 579 LKIRDRLLRVCHAKA--ETPTTNTXXXXXXXXXXXXXXXXRFALSSGEASPGSKDNKPKA 752
KIRDRLLR+ HAK+ TP T + AL+ S D K K
Sbjct: 304 FKIRDRLLRLAHAKSADATPKKTT-----DAGKTKGGSKHKTALTPSSKSHEGSD-KTKR 357
Query: 753 KAASLSYQGIRASKSGVLKKTGVPRRPTGNTKHEANKAGRAEQKTS-KTKRP-XXXXXXX 926
KA++LSYQG+RAS+SGV+KK V +RP+ K + + +S K KRP
Sbjct: 358 KASTLSYQGLRASQSGVVKKAKVSQRPSYQGKQQGRTSETGHDASSQKAKRPAVAARKAK 417
Query: 927 XXXXXXXXEGGTPENTRRNKKARK 998
+ TPENT R+KKA+K
Sbjct: 418 QLAKKRKLDAQTPENTHRSKKAKK 441
>dbj|BAK01022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 466
Score = 359 bits (921), Expect = 9e-97
Identities = 197/323 (60%), Positives = 229/323 (70%), Gaps = 3/323 (0%)
Frame = +3
Query: 39 KLLRTVFVGNLPLRTKKKALMKEFGRFGEIESVRIRSVPLLDSKIPRKGAVIKGKINESV 218
KLLRTVFVGNLPLRTKKKAL KEF FG ++SVRIRSVPL D+KIPRKGAVIKGKIN+SV
Sbjct: 149 KLLRTVFVGNLPLRTKKKALTKEFATFGVVDSVRIRSVPLGDTKIPRKGAVIKGKINDSV 208
Query: 219 DSVHAYIVFKQEQSANAALSHNMAEVGGNHIRVDMACPPRKKLKGASPLYDRKRTVFVGN 398
D+VHAYIVFK EQ A ALSHNMA GNHIRVDMACPPRKKLKG PLYDRKRTVFVGN
Sbjct: 209 DNVHAYIVFKDEQCARTALSHNMALFNGNHIRVDMACPPRKKLKGDGPLYDRKRTVFVGN 268
Query: 399 LPFDVKDEELYRLFSGTSQSDSGLEAVRVIRDPNTSLGKGIAYVLFKTRDAANSVVRQKN 578
LPFDVKDEELY+LF G S +EA+RV+RDP++SLGKGIAYVLFKTR+AANSVV+++
Sbjct: 269 LPFDVKDEELYQLFCGPSGPQGDVEAIRVVRDPDSSLGKGIAYVLFKTREAANSVVKKRG 328
Query: 579 LKIRDRLLRVCHAKAETPTTNTXXXXXXXXXXXXXXXXRFALSSGEASPGSKDNKPKAKA 758
LKIRDR LR+ HAKA T + + G S D+K +
Sbjct: 329 LKIRDRFLRLTHAKAADATPK----KTVAGKTRGTPKQKTPSTPGSKSREGSDSKKRKAP 384
Query: 759 ASLSYQGIRASKSGVLKKTGVPRRPT--GNTKHEANKAGRAEQKTSKTKRPXXXXXXXXX 932
ASLSYQG++++KSGV+KK V RRP GN + ++ G++E K KRP
Sbjct: 385 ASLSYQGLKSTKSGVVKKVKVARRPVNQGNQQGRPSETGQSE-SARKFKRPAVAARKAKQ 443
Query: 933 XXXXXXEGG-TPENTRRNKKARK 998
+ G TPENT R+KKARK
Sbjct: 444 LTKKRKQDGRTPENTHRSKKARK 466
>ref|XP_002466077.1| hypothetical protein SORBIDRAFT_01g000750 [Sorghum bicolor]
gi|241919931|gb|EER93075.1| hypothetical protein
SORBIDRAFT_01g000750 [Sorghum bicolor]
Length = 440
Score = 351 bits (900), Expect = 2e-94
Identities = 191/325 (58%), Positives = 231/325 (71%), Gaps = 5/325 (1%)
Frame = +3
Query: 39 KLLRTVFVGNLPLRTKKKALMKEFGRFGEIESVRIRSVPLLDSKIPRKGAVIKGKINESV 218
KLLRTVFVGNLPLRTK+K L KEF FGEIESVRIRSVPL+D+K+ RKGAV++GK+NE V
Sbjct: 127 KLLRTVFVGNLPLRTKRKVLTKEFAAFGEIESVRIRSVPLVDTKLSRKGAVLQGKVNELV 186
Query: 219 DSVHAYIVFKQEQSANAALSHNMAEVGGNHIRVDMACPPRKKLKGASPLYDRKRTVFVGN 398
D+VHAYIVFK EQSA ALSHNMA GGNHIRVDMACPPRKKL+G PLYDRKRTVFVGN
Sbjct: 187 DNVHAYIVFKDEQSARTALSHNMALFGGNHIRVDMACPPRKKLRGEGPLYDRKRTVFVGN 246
Query: 399 LPFDVKDEELYRLFSGTSQSDSGLEAVRVIRDPNTSLGKGIAYVLFKTRDAANSVVRQKN 578
LPFDVKDEE+Y++F G+S S+ +EA+RVIRDP++SLGKGIAYVLFKTR+AANS+ R+++
Sbjct: 247 LPFDVKDEEVYQVFCGSSGSEGDVEAIRVIRDPSSSLGKGIAYVLFKTREAANSIARKQD 306
Query: 579 LKIRDRLLRVCHAKAETPTTNTXXXXXXXXXXXXXXXXRFALSSGEASPGSKDN----KP 746
+KIRDRLLR+ HAK T R ++PGSK N K
Sbjct: 307 MKIRDRLLRLTHAKPVDATPK---------KTEVQKRSRVPKHKEISTPGSKSNEGSEKA 357
Query: 747 KAKAASLSYQGIRASKSGVLKKTGVPRRPTGNTKHEANKAGRAEQKTSKTKRP-XXXXXX 923
K KA++LSYQG+R+SKSGV+KK V ++P ++K + +K K KRP
Sbjct: 358 KRKASALSYQGLRSSKSGVVKKVKVNQQP--SSKGKQSKTNETGASARKDKRPAVAARKA 415
Query: 924 XXXXXXXXXEGGTPENTRRNKKARK 998
+ T ENT R+KK RK
Sbjct: 416 KQLAKKRKVDASTLENTHRSKKPRK 440