BLASTX nr result
ID: Dioscorea21_contig00007396
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00007396 (567 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003618718.1| Sister chromatid cohesion [Medicago truncatu... 64 2e-08 ref|XP_002526100.1| pearli, putative [Ricinus communis] gi|22353... 64 2e-08 ref|XP_002324104.1| predicted protein [Populus trichocarpa] gi|2... 56 4e-06 ref|XP_003554911.1| PREDICTED: nipped-B-like protein-like [Glyci... 55 8e-06 ref|XP_003543868.1| PREDICTED: nipped-B-like protein-like [Glyci... 55 8e-06 >ref|XP_003618718.1| Sister chromatid cohesion [Medicago truncatula] gi|355493733|gb|AES74936.1| Sister chromatid cohesion [Medicago truncatula] Length = 715 Score = 63.9 bits (154), Expect = 2e-08 Identities = 33/79 (41%), Positives = 43/79 (54%) Frame = -3 Query: 547 LPTSYQEMVQKYQEFKTALREDTMDYTTYSANIXXXXXXXXXXXXXXXTQERFXXXXXXX 368 LPTS QE++Q+YQEFK AL+EDT+DY+ Y+ANI Sbjct: 629 LPTSPQELIQRYQEFKNALKEDTVDYSLYTANIKRKRPTQTPRKVRKSGPPMVGGDNDED 688 Query: 367 XXXDWTGGARRLSFSGQKR 311 DW GG+R +SFSG +R Sbjct: 689 DDEDWAGGSRNISFSGGRR 707 >ref|XP_002526100.1| pearli, putative [Ricinus communis] gi|223534597|gb|EEF36294.1| pearli, putative [Ricinus communis] Length = 1758 Score = 63.9 bits (154), Expect = 2e-08 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 4/94 (4%) Frame = -3 Query: 565 SDISIILPTSYQEMVQKYQEFKTALREDTMDYTTYSANIXXXXXXXXXXXXXXXTQERFX 386 S+ S +P++YQ++VQ+YQEFK+AL+ED +DYTTY+ANI + Sbjct: 1668 SETSTSVPSTYQDLVQRYQEFKSALKEDAVDYTTYTANI---KRKRPTPRKTKHGRMNGV 1724 Query: 385 XXXXXXXXXDWTGGARRLSFSGQK----RVTRQR 296 DWTGG RR+S SG++ R RQR Sbjct: 1725 DDDDEDDDADWTGGVRRVSNSGRRSNNSRACRQR 1758 >ref|XP_002324104.1| predicted protein [Populus trichocarpa] gi|222867106|gb|EEF04237.1| predicted protein [Populus trichocarpa] Length = 1815 Score = 56.2 bits (134), Expect = 4e-06 Identities = 23/33 (69%), Positives = 32/33 (96%) Frame = -3 Query: 547 LPTSYQEMVQKYQEFKTALREDTMDYTTYSANI 449 LP++YQ++VQ+YQEFK AL+EDT+DY+TY+ANI Sbjct: 1733 LPSTYQDLVQRYQEFKGALKEDTVDYSTYTANI 1765 >ref|XP_003554911.1| PREDICTED: nipped-B-like protein-like [Glycine max] Length = 1655 Score = 55.1 bits (131), Expect = 8e-06 Identities = 25/38 (65%), Positives = 31/38 (81%) Frame = -3 Query: 562 DISIILPTSYQEMVQKYQEFKTALREDTMDYTTYSANI 449 D LPTS QE++Q+YQEFK ALREDT+DY+ Y+ANI Sbjct: 1558 DSQFSLPTSPQELIQRYQEFKHALREDTVDYSHYTANI 1595 >ref|XP_003543868.1| PREDICTED: nipped-B-like protein-like [Glycine max] Length = 1723 Score = 55.1 bits (131), Expect = 8e-06 Identities = 25/38 (65%), Positives = 31/38 (81%) Frame = -3 Query: 562 DISIILPTSYQEMVQKYQEFKTALREDTMDYTTYSANI 449 D LPTS QE++Q+YQEFK ALREDT+DY+ Y+ANI Sbjct: 1629 DSQFSLPTSPQELIQRYQEFKHALREDTVDYSHYTANI 1666