BLASTX nr result

ID: Dioscorea21_contig00007396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007396
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618718.1| Sister chromatid cohesion [Medicago truncatu...    64   2e-08
ref|XP_002526100.1| pearli, putative [Ricinus communis] gi|22353...    64   2e-08
ref|XP_002324104.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06
ref|XP_003554911.1| PREDICTED: nipped-B-like protein-like [Glyci...    55   8e-06
ref|XP_003543868.1| PREDICTED: nipped-B-like protein-like [Glyci...    55   8e-06

>ref|XP_003618718.1| Sister chromatid cohesion [Medicago truncatula]
           gi|355493733|gb|AES74936.1| Sister chromatid cohesion
           [Medicago truncatula]
          Length = 715

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/79 (41%), Positives = 43/79 (54%)
 Frame = -3

Query: 547 LPTSYQEMVQKYQEFKTALREDTMDYTTYSANIXXXXXXXXXXXXXXXTQERFXXXXXXX 368
           LPTS QE++Q+YQEFK AL+EDT+DY+ Y+ANI                           
Sbjct: 629 LPTSPQELIQRYQEFKNALKEDTVDYSLYTANIKRKRPTQTPRKVRKSGPPMVGGDNDED 688

Query: 367 XXXDWTGGARRLSFSGQKR 311
              DW GG+R +SFSG +R
Sbjct: 689 DDEDWAGGSRNISFSGGRR 707


>ref|XP_002526100.1| pearli, putative [Ricinus communis] gi|223534597|gb|EEF36294.1|
            pearli, putative [Ricinus communis]
          Length = 1758

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
 Frame = -3

Query: 565  SDISIILPTSYQEMVQKYQEFKTALREDTMDYTTYSANIXXXXXXXXXXXXXXXTQERFX 386
            S+ S  +P++YQ++VQ+YQEFK+AL+ED +DYTTY+ANI                +    
Sbjct: 1668 SETSTSVPSTYQDLVQRYQEFKSALKEDAVDYTTYTANI---KRKRPTPRKTKHGRMNGV 1724

Query: 385  XXXXXXXXXDWTGGARRLSFSGQK----RVTRQR 296
                     DWTGG RR+S SG++    R  RQR
Sbjct: 1725 DDDDEDDDADWTGGVRRVSNSGRRSNNSRACRQR 1758


>ref|XP_002324104.1| predicted protein [Populus trichocarpa] gi|222867106|gb|EEF04237.1|
            predicted protein [Populus trichocarpa]
          Length = 1815

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/33 (69%), Positives = 32/33 (96%)
 Frame = -3

Query: 547  LPTSYQEMVQKYQEFKTALREDTMDYTTYSANI 449
            LP++YQ++VQ+YQEFK AL+EDT+DY+TY+ANI
Sbjct: 1733 LPSTYQDLVQRYQEFKGALKEDTVDYSTYTANI 1765


>ref|XP_003554911.1| PREDICTED: nipped-B-like protein-like [Glycine max]
          Length = 1655

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = -3

Query: 562  DISIILPTSYQEMVQKYQEFKTALREDTMDYTTYSANI 449
            D    LPTS QE++Q+YQEFK ALREDT+DY+ Y+ANI
Sbjct: 1558 DSQFSLPTSPQELIQRYQEFKHALREDTVDYSHYTANI 1595


>ref|XP_003543868.1| PREDICTED: nipped-B-like protein-like [Glycine max]
          Length = 1723

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = -3

Query: 562  DISIILPTSYQEMVQKYQEFKTALREDTMDYTTYSANI 449
            D    LPTS QE++Q+YQEFK ALREDT+DY+ Y+ANI
Sbjct: 1629 DSQFSLPTSPQELIQRYQEFKHALREDTVDYSHYTANI 1666


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