BLASTX nr result

ID: Dioscorea21_contig00007388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007388
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305171.1| predicted protein [Populus trichocarpa] gi|2...    86   1e-14
ref|XP_002280570.2| PREDICTED: uncharacterized protein LOC100263...    82   2e-13
ref|XP_002329292.1| predicted protein [Populus trichocarpa] gi|2...    80   6e-13
emb|CAN61844.1| hypothetical protein VITISV_004819 [Vitis vinifera]    78   3e-12
ref|XP_002531306.1| conserved hypothetical protein [Ricinus comm...    68   4e-09

>ref|XP_002305171.1| predicted protein [Populus trichocarpa] gi|222848135|gb|EEE85682.1|
            predicted protein [Populus trichocarpa]
          Length = 978

 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 82/293 (27%), Positives = 126/293 (43%), Gaps = 8/293 (2%)
 Frame = +3

Query: 75   RKRRPAGGLQNENLCLSNSKSPQERIAKGITTER--------SISRNRIKSEVRKRAXXX 230
            RKR      Q E+  L+N  S  +R  K  +  R        S+ R  I+S         
Sbjct: 504  RKRTVGVNAQVESTGLANPMSMGQRNTKSDSVSRKVVASSSLSMDRACIRSRSVNDGECN 563

Query: 231  XXXXXXXXXAFSFTFTAPMRHGSSSSLYKGMAVKSSSEDKHSGEFLNSKASSPEGNNGDS 410
                     A SFTF +P RH +  S  KG+  +S   DK++    + +    + N+G +
Sbjct: 564  KNNGSRENDAISFTFNSPFRHRTFVS--KGLKERSLQIDKNTS---HQRRLVLDENDGKT 618

Query: 411  TSQRATPLRGDALSSLLEKKIRELSSLDMDELAKGDANLGRSTASILEELISALTTGAPL 590
              Q   PLRGDAL ++LE+K++EL+S + DEL  G +   RSTA IL+ELI ALT   P 
Sbjct: 619  PLQNQFPLRGDALGTILEQKLKELASQEQDELTSGGSKPMRSTAMILQELIFALTADQP- 677

Query: 591  PQKNSDCCMDEHSVTSNSCHDSDELQNQAVAITKSLQEKEQSVFAAASPACENDQCSPIS 770
                    M  H+   N+    D+   + V I ++          +   + + D  SP S
Sbjct: 678  --------MSPHAHMFNA----DKTYQKEVKIRRN----------SVGISVDGDHLSPGS 715

Query: 771  ILRVXXXXXXXXXXXXXXXXXCKPEVRLTESFNNNTRQLDLDGDLLDSATSVI 929
            +L                    +  +   +   +  + +D D DLLD A+S+I
Sbjct: 716  VLEASFSNDSCISSSLDESSGRRMLLDSMDCSYDQPQPVDTDADLLDCASSLI 768


>ref|XP_002280570.2| PREDICTED: uncharacterized protein LOC100263470 [Vitis vinifera]
            gi|296087265|emb|CBI33639.3| unnamed protein product
            [Vitis vinifera]
          Length = 1004

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 12/297 (4%)
 Frame = +3

Query: 72   IRKRRPAG-GLQNENLCLSNSKSP-QERIAKGITTERSISRNR--IKSEVRKRAXXXXXX 239
            +RKRR    G Q +N    NS S  Q  +   ++T + + +N+  +K+ V          
Sbjct: 502  VRKRRTMNVGRQVDNASFLNSTSVNQGNVRCNMSTRKGLPKNQTCVKNAVASLRESDGAH 561

Query: 240  XXXXXXAFSFTFTAPMRHGSSSSLYKGMAVKSSSEDKHSGEFLNSKASSP-----EGNNG 404
                    SFTF +PMR+ +      GM  +   + +   + + +  S P     + +NG
Sbjct: 562  VNKEIDVISFTFNSPMRNKT------GMLAEMGEKRRDQSDVICNSTSRPRKLILDEDNG 615

Query: 405  DSTSQRATPLRGDALSSLLEKKIRELSSLDMDELAKGDANLGRSTASILEELISALTTGA 584
                Q++ PLR DAL + L KK++EL+S + DEL+ G     R  A IL+ELISALT   
Sbjct: 616  KKAFQKSFPLRVDALGAFLGKKLKELASAEEDELSAGGTPTKRCPAMILQELISALTEEK 675

Query: 585  PLPQKNSDCCMDEH-SVTSNSCHDSDELQNQAVAITKSL--QEKEQSVFAAASPACENDQ 755
            P+ Q +    ++++ ++T  +   SD + +      K++  Q K ++   + + + + D 
Sbjct: 676  PVSQYDGAVRINQNDNLTYCNKDPSDHVCSNGHMSKKNVTFQAKAKTEGTSFTVSHDGDH 735

Query: 756  CSPISILRVXXXXXXXXXXXXXXXXXCKPEVRLTESFNNNTRQLDLDGDLLDSATSV 926
             SP S+L                         +  S+ +     + D DLLDSATS+
Sbjct: 736  QSPGSVLEASFSNESFSSSLDDSSGHKLHPGSIDYSY-DQPESSEADTDLLDSATSL 791


>ref|XP_002329292.1| predicted protein [Populus trichocarpa] gi|222870746|gb|EEF07877.1|
           predicted protein [Populus trichocarpa]
          Length = 703

 Score = 80.5 bits (197), Expect = 6e-13
 Identities = 46/109 (42%), Positives = 71/109 (65%)
 Frame = +3

Query: 264 SFTFTAPMRHGSSSSLYKGMAVKSSSEDKHSGEFLNSKASSPEGNNGDSTSQRATPLRGD 443
           SFTF +P+RH +  SL  G+  +S   DK++      +    + N+G ++ Q   PL+GD
Sbjct: 567 SFTFNSPLRHKNFVSL--GLKERSHQIDKNAS--YQRRRLVLDENDGKTSLQNKLPLKGD 622

Query: 444 ALSSLLEKKIRELSSLDMDELAKGDANLGRSTASILEELISALTTGAPL 590
           ALS++LE+K++EL+S + DEL  G ++L +STA IL+ELI ALT   P+
Sbjct: 623 ALSTILEQKLKELASQEEDELISGGSHLKKSTAMILQELIFALTADQPM 671


>emb|CAN61844.1| hypothetical protein VITISV_004819 [Vitis vinifera]
          Length = 1101

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
 Frame = +3

Query: 72   IRKRRPAG-GLQNENLCLSNSKSP-QERIAKGITTERSISRNR--IKSEVRKRAXXXXXX 239
            +RKRR    G Q +N    NS S  Q  +   ++T + + +N+  +K+ V          
Sbjct: 502  VRKRRTMNVGRQVDNASFLNSTSVNQGNVRCNMSTRKGLPKNQTCVKNAVASLRESDGAH 561

Query: 240  XXXXXXAFSFTFTAPMRHGSSSSLYKGMAVKSSSEDKHSGEFLNSKASSP-----EGNNG 404
                    SFTF +PMR+ +      GM  +   + +   + + +  S P     + +NG
Sbjct: 562  VNKEIDVISFTFNSPMRNKT------GMLAEMGEKRRDRSDVICNSTSRPRKLILDEDNG 615

Query: 405  DSTSQRATPLRGDALSSLLEKKIRELSSLDMDELAKGDANLGRSTASILEELISALTTGA 584
                Q++ PLR DAL + L KK++EL+S + DEL+ G     R  A IL+ELISALT   
Sbjct: 616  KKAFQKSFPLRXDALGAFLGKKLKELASAEEDELSAGGTLTKRCPAMILQELISALTEEK 675

Query: 585  PLPQ 596
            P+ Q
Sbjct: 676  PVSQ 679


>ref|XP_002531306.1| conserved hypothetical protein [Ricinus communis]
           gi|223529097|gb|EEF31078.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 869

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 60/191 (31%), Positives = 90/191 (47%), Gaps = 6/191 (3%)
 Frame = +3

Query: 36  VGMERSVGGKHLIRKRRPAGGLQNENLCLSNSKSPQERIAKGITTERSISRNRIKSEVRK 215
           V M RS+GG+      RP    + +N  +   +         + + R  S  +++  VRK
Sbjct: 403 VAMNRSLGGR-----TRPRVSTKADNYMVDTERK--------VCSRRDDSLPQLRPPVRK 449

Query: 216 RAXXXXXXXXXXXXAFSFTFTAPMRHGS-SSSLYKGMAVKSSSEDKHSGEFLN-----SK 377
           R               S T    MRH +    L     ++      ++   LN     ++
Sbjct: 450 RRTASSNAQLESNGLVSST---SMRHRNIKCDLMIRKELEPDGNKNNNVISLNHASIKTR 506

Query: 378 ASSPEGNNGDSTSQRATPLRGDALSSLLEKKIRELSSLDMDELAKGDANLGRSTASILEE 557
           ++S E N+  + SQR  PL GD L +LLE+K++EL+S + DELA G +   RSTA IL+E
Sbjct: 507 SASQERNDVKTFSQRKIPLDGDTLGALLEQKLKELTSQEEDELAIGGSAPKRSTAMILQE 566

Query: 558 LISALTTGAPL 590
           LISAL    PL
Sbjct: 567 LISALVEQQPL 577


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