BLASTX nr result

ID: Dioscorea21_contig00007320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007320
         (1405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275015.1| PREDICTED: ATP synthase gamma chain, chlorop...   442   e-121
ref|XP_004145113.1| PREDICTED: ATP synthase gamma chain, chlorop...   440   e-121
ref|NP_567265.1| ATP synthase gamma chain 1 [Arabidopsis thalian...   440   e-121
gb|ADN34052.1| ATP synthase [Cucumis melo subsp. melo]                440   e-121
ref|XP_002874807.1| hypothetical protein ARALYDRAFT_911722 [Arab...   440   e-121

>ref|XP_002275015.1| PREDICTED: ATP synthase gamma chain, chloroplastic-like isoform 1
            [Vitis vinifera]
          Length = 372

 Score =  442 bits (1136), Expect = e-121
 Identities = 239/332 (71%), Positives = 257/332 (77%)
 Frame = -2

Query: 1158 LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVSGRPFSETLVEVLYNINEQLQTDDID 979
            LR+RIDSVKNTQKITEAMKLVAAAKVRRAQEAVV+GRPFSETLVEVLYNINEQLQTDDID
Sbjct: 55   LRERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDID 114

Query: 978  VPLTKVRPVKKIALVVVTGDRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 799
            VPLTKVRPVKK+ALVVVTGDRGL                                     
Sbjct: 115  VPLTKVRPVKKVALVVVTGDRGLCGGFNNAIIKKAESRIAELKDLGLDYTVISVGKKGNS 174

Query: 798  XXXXXXXXXXXXXXXXYFIRRPYIPVDRFIEGGSLPTTKDAQAIADDVFSLFISEEVDKV 619
                            YF+RRPYIPVD+F+EGGSLPT K+AQ IADDVFSLF+SEEVDKV
Sbjct: 175  ----------------YFLRRPYIPVDKFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKV 218

Query: 618  ELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDELFRLTTKEGKLTVERET 439
            ELLYTKFVSLVK+DPVIHTLLPLSPKGEICD+NG CVDAAEDE FRLTT+EGKLTVER+ 
Sbjct: 219  ELLYTKFVSLVKADPVIHTLLPLSPKGEICDVNGKCVDAAEDEFFRLTTREGKLTVERDV 278

Query: 438  VRTPTPAFSPILQFEQDPVQILDALLPLYLNSQIXXXXXXXXXXXXXXRMSAMSNASDNA 259
            +RT T  FSPILQFEQDPVQILDALLPLYLNSQI              RMSAMSNA+DNA
Sbjct: 279  IRTQTVEFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNA 338

Query: 258  VELRRSLSMVYNRQRQAKITGEILEIIAGADA 163
            VEL+++LSMVYNRQRQAKITGEILEI+AGADA
Sbjct: 339  VELKKNLSMVYNRQRQAKITGEILEIVAGADA 370


>ref|XP_004145113.1| PREDICTED: ATP synthase gamma chain, chloroplastic-like [Cucumis
            sativus] gi|449474626|ref|XP_004154236.1| PREDICTED: ATP
            synthase gamma chain, chloroplastic-like [Cucumis
            sativus] gi|449488358|ref|XP_004158011.1| PREDICTED: ATP
            synthase gamma chain, chloroplastic-like [Cucumis
            sativus]
          Length = 373

 Score =  440 bits (1131), Expect = e-121
 Identities = 239/332 (71%), Positives = 258/332 (77%)
 Frame = -2

Query: 1158 LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVSGRPFSETLVEVLYNINEQLQTDDID 979
            LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVV+GRPFSE LVEVLYNINEQLQT+D+D
Sbjct: 56   LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVD 115

Query: 978  VPLTKVRPVKKIALVVVTGDRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 799
            VPLTKVRPVKK+ALVVVTGDRGL                                     
Sbjct: 116  VPLTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARIKELKALGLDYTVISVGKKGNS 175

Query: 798  XXXXXXXXXXXXXXXXYFIRRPYIPVDRFIEGGSLPTTKDAQAIADDVFSLFISEEVDKV 619
                            YF+RRPYIPVD+F+EGG+LPT K+AQAIADDVFSLF+SEEVDKV
Sbjct: 176  ----------------YFLRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKV 219

Query: 618  ELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDELFRLTTKEGKLTVERET 439
            ELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDE FRLTTKEGKLTVER++
Sbjct: 220  ELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDS 279

Query: 438  VRTPTPAFSPILQFEQDPVQILDALLPLYLNSQIXXXXXXXXXXXXXXRMSAMSNASDNA 259
            VRT T  FSPIL+FEQDPVQILDALLPLYLNSQI              RMSAMSNA+DNA
Sbjct: 280  VRTSTSDFSPILEFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNA 339

Query: 258  VELRRSLSMVYNRQRQAKITGEILEIIAGADA 163
             EL+R+LS+VYNRQRQAKITGEILEI+AGA+A
Sbjct: 340  SELKRTLSIVYNRQRQAKITGEILEIVAGANA 371


>ref|NP_567265.1| ATP synthase gamma chain 1 [Arabidopsis thaliana]
            gi|461550|sp|Q01908.1|ATPG1_ARATH RecName: Full=ATP
            synthase gamma chain 1, chloroplastic; AltName:
            Full=F-ATPase gamma subunit 1; Flags: Precursor
            gi|5732056|gb|AAD48955.1|AF149414_4 Arabidopsis thaliana
            APC1-ATP synthase gamma chain 1 (GB:M61741); contains
            similarity to Pfam PF00231 -ATP synthase; score=658.6,
            E=3.1e-194n n+1 [Arabidopsis thaliana]
            gi|16226524|gb|AAL16191.1|AF428422_1 AT4g04640/T19J18_4
            [Arabidopsis thaliana] gi|166632|gb|AAA32753.1| ATP
            synthase gamma-subunit [Arabidopsis thaliana]
            gi|7267222|emb|CAB80829.1| AT4g04640 [Arabidopsis
            thaliana] gi|17473929|gb|AAL38375.1| unknown protein
            [Arabidopsis thaliana] gi|20148353|gb|AAM10067.1| unknown
            protein [Arabidopsis thaliana] gi|21594056|gb|AAM65974.1|
            ATP synthase gamma-subunit, putative [Arabidopsis
            thaliana] gi|332657008|gb|AEE82408.1| ATP synthase gamma
            chain 1 [Arabidopsis thaliana]
          Length = 373

 Score =  440 bits (1131), Expect = e-121
 Identities = 239/332 (71%), Positives = 257/332 (77%)
 Frame = -2

Query: 1158 LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVSGRPFSETLVEVLYNINEQLQTDDID 979
            LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVV+GRPFSETLVEVLYNINEQLQTDD+D
Sbjct: 56   LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVD 115

Query: 978  VPLTKVRPVKKIALVVVTGDRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 799
            VPLTKVRPVKK+ALVVVTGDRGL                                     
Sbjct: 116  VPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVGKKGNS 175

Query: 798  XXXXXXXXXXXXXXXXYFIRRPYIPVDRFIEGGSLPTTKDAQAIADDVFSLFISEEVDKV 619
                            YF+RRPYIPVD+++E G+LPT K+AQA+ADDVFSLFISEEVDKV
Sbjct: 176  ----------------YFLRRPYIPVDKYLEAGTLPTAKEAQAVADDVFSLFISEEVDKV 219

Query: 618  ELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDELFRLTTKEGKLTVERET 439
            ELLYTKFVSLVKS+PVIHTLLPLSPKGEICDING CVDAAEDE FRLTTKEGKLTVERET
Sbjct: 220  ELLYTKFVSLVKSEPVIHTLLPLSPKGEICDINGTCVDAAEDEFFRLTTKEGKLTVERET 279

Query: 438  VRTPTPAFSPILQFEQDPVQILDALLPLYLNSQIXXXXXXXXXXXXXXRMSAMSNASDNA 259
             RTPT  FSPILQFEQDPVQILDALLPLYLNSQI              RMSAMS+ASDNA
Sbjct: 280  FRTPTADFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSASDNA 339

Query: 258  VELRRSLSMVYNRQRQAKITGEILEIIAGADA 163
             +L++SLSMVYNR+RQAKITGEILEI+AGA+A
Sbjct: 340  SDLKKSLSMVYNRKRQAKITGEILEIVAGANA 371


>gb|ADN34052.1| ATP synthase [Cucumis melo subsp. melo]
          Length = 373

 Score =  440 bits (1131), Expect = e-121
 Identities = 239/332 (71%), Positives = 258/332 (77%)
 Frame = -2

Query: 1158 LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVSGRPFSETLVEVLYNINEQLQTDDID 979
            LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVV+GRPFSE LVEVLYNINEQLQT+D+D
Sbjct: 56   LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVD 115

Query: 978  VPLTKVRPVKKIALVVVTGDRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 799
            VPLTKVRPVKK+ALVVVTGDRGL                                     
Sbjct: 116  VPLTKVRPVKKVALVVVTGDRGLCGGFNNTIIKKAEARISELKALGLDYTVISVGKKGNS 175

Query: 798  XXXXXXXXXXXXXXXXYFIRRPYIPVDRFIEGGSLPTTKDAQAIADDVFSLFISEEVDKV 619
                            YF+RRPYIPVD+F+EGG+LPT K+AQAIADDVFSLF+SEEVDKV
Sbjct: 176  ----------------YFLRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKV 219

Query: 618  ELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDELFRLTTKEGKLTVERET 439
            ELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDE FRLTTKEGKLTVER++
Sbjct: 220  ELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDS 279

Query: 438  VRTPTPAFSPILQFEQDPVQILDALLPLYLNSQIXXXXXXXXXXXXXXRMSAMSNASDNA 259
            VRT T  FSPIL+FEQDPVQILDALLPLYLNSQI              RMSAMSNA+DNA
Sbjct: 280  VRTSTSDFSPILEFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNA 339

Query: 258  VELRRSLSMVYNRQRQAKITGEILEIIAGADA 163
             EL+R+LS+VYNRQRQAKITGEILEI+AGA+A
Sbjct: 340  SELKRTLSIVYNRQRQAKITGEILEIVAGANA 371


>ref|XP_002874807.1| hypothetical protein ARALYDRAFT_911722 [Arabidopsis lyrata subsp.
            lyrata] gi|297320644|gb|EFH51066.1| hypothetical protein
            ARALYDRAFT_911722 [Arabidopsis lyrata subsp. lyrata]
          Length = 377

 Score =  440 bits (1131), Expect = e-121
 Identities = 240/332 (72%), Positives = 257/332 (77%)
 Frame = -2

Query: 1158 LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVSGRPFSETLVEVLYNINEQLQTDDID 979
            LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVV+GRPFSETLVEVLYNINEQLQTDD+D
Sbjct: 60   LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVD 119

Query: 978  VPLTKVRPVKKIALVVVTGDRGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 799
            VPLTKVRPVKK+ALVVVTGDRGL                                     
Sbjct: 120  VPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLDYTVISVGKKGNS 179

Query: 798  XXXXXXXXXXXXXXXXYFIRRPYIPVDRFIEGGSLPTTKDAQAIADDVFSLFISEEVDKV 619
                            YF+RRPYIPVDR++E G+LPT K+AQA+ADDVFSLFISEEVDKV
Sbjct: 180  ----------------YFLRRPYIPVDRYLEAGTLPTAKEAQAVADDVFSLFISEEVDKV 223

Query: 618  ELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDELFRLTTKEGKLTVERET 439
            ELLYTKFVSLVKS+PVIHTLLPLSPKGEICDING CVDAAEDELFRLTTK GKLTVERET
Sbjct: 224  ELLYTKFVSLVKSEPVIHTLLPLSPKGEICDINGTCVDAAEDELFRLTTKGGKLTVERET 283

Query: 438  VRTPTPAFSPILQFEQDPVQILDALLPLYLNSQIXXXXXXXXXXXXXXRMSAMSNASDNA 259
             RTPT  FSPILQFEQDPVQILDALLPLYLNSQI              RMSAMS+ASDNA
Sbjct: 284  FRTPTADFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSASDNA 343

Query: 258  VELRRSLSMVYNRQRQAKITGEILEIIAGADA 163
             +L++SLSMVYNR+RQAKITGEILEI+AGA+A
Sbjct: 344  SDLKKSLSMVYNRKRQAKITGEILEIVAGANA 375


Top