BLASTX nr result

ID: Dioscorea21_contig00007270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007270
         (1915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275430.1| PREDICTED: pseudouridine kinase [Vitis vinif...   367   6e-99
ref|XP_003556290.1| PREDICTED: pseudouridine kinase-like [Glycin...   357   6e-96
ref|XP_002519085.1| pentatricopeptide repeat-containing protein,...   355   2e-95
ref|XP_002306090.1| predicted protein [Populus trichocarpa] gi|2...   354   4e-95
ref|XP_003607889.1| Sugar kinase, putative [Medicago truncatula]...   347   5e-93

>ref|XP_002275430.1| PREDICTED: pseudouridine kinase [Vitis vinifera]
            gi|297744710|emb|CBI37972.3| unnamed protein product
            [Vitis vinifera]
          Length = 426

 Score =  367 bits (942), Expect = 6e-99
 Identities = 192/351 (54%), Positives = 247/351 (70%), Gaps = 4/351 (1%)
 Frame = -3

Query: 1913 VQYVSGGVARNVAECMSKLGTRPFIISVVGLDMAGELLLKYWKSAGLSTEGILKLQGIAT 1734
            V YV GGVARN+AECMSKLGT+P++IS +GLDMAG +LL++WKSA LS EGI K   I T
Sbjct: 71   VHYVPGGVARNIAECMSKLGTKPYMISALGLDMAGNMLLEHWKSARLSMEGIRKHHDIQT 130

Query: 1733 PVVSNVYDCSGXXXXXXXXXXXXETFVTPQWIQKFSHKIRSAPVVMVDANLNPQALKAAC 1554
             VV +++D  G            E F+T  WI++F   I SAPV+MVDANL+P AL+A+C
Sbjct: 131  SVVCHIFDGDGELAAGVASVEAIENFLTSDWIRQFKCNICSAPVLMVDANLSPSALEASC 190

Query: 1553 QLAGEFSIPLWFEPVSITKSVRISSIINYITFASPNVNELISMANALSLNKKFDFITKSF 1374
            Q+A E S P+WFEPVS+ KS R++S+  YITFASPN +ELI+MANALS    F  I + +
Sbjct: 191  QMAAESSTPVWFEPVSVIKSRRVASVAKYITFASPNEDELIAMANALSCKDVFHPIQRDY 250

Query: 1373 Q----SIETLFQMLKPAICVLLEKGVNVLIVTLGSYGVFVCCTGGPDFINEALNRRTASC 1206
                 SIE+LFQMLKPAI VLLEKG+ V+++TLGS GVF+C   GP F+N  L       
Sbjct: 251  VGTKCSIESLFQMLKPAILVLLEKGIKVVVLTLGSDGVFLCSKEGPGFMNNVLKGTKPQG 310

Query: 1205 SSRQLYELVNNSSLANRFHCNTETGMKSSSFAYHFPSLPASVVSLTGAGDCLVGGILASI 1026
               QLYE++  S  +N F     +  K+  FA H P+LPASV  LTGAGDCLVGG LAS+
Sbjct: 311  FGSQLYEIITESCPSNLFLNIATSSSKTYPFAVHLPALPASVARLTGAGDCLVGGTLASM 370

Query: 1025 CAGIDLMQSIAVGITVAKAAVEAESNVPAKYSLTTIKDEAVKIMSSAQPLA 873
            CAG+D++QS+A GI  AKAAVE E+NVP++YSL  I D+A ++ SSA+ ++
Sbjct: 371  CAGLDVLQSVAAGIAAAKAAVEGETNVPSEYSLAKIADDARRVCSSAKVIS 421


>ref|XP_003556290.1| PREDICTED: pseudouridine kinase-like [Glycine max]
          Length = 390

 Score =  357 bits (916), Expect = 6e-96
 Identities = 195/351 (55%), Positives = 249/351 (70%), Gaps = 5/351 (1%)
 Frame = -3

Query: 1913 VQYVSGGVARNVAECMSKLGTRPFIISVVGLDMAGELLLKYWKSAGLSTEGILKLQGIAT 1734
            V YV GGVARNVAECMSKLG +P++IS +G DMAG LLL  WKSAGLS EGILK + I T
Sbjct: 36   VYYVQGGVARNVAECMSKLGAKPYMISALGFDMAGNLLLNQWKSAGLSIEGILKDKDIET 95

Query: 1733 PVVSNVYDCSGXXXXXXXXXXXXETFVTPQWIQKFSHKIRSAPVVMVDANLNPQALKAAC 1554
            PVV N++D +G            E ++TP WI +F + + SAPV+MVDANL+  +L+AAC
Sbjct: 96   PVVCNIFDVNGEVAAGVASVEAFEKYLTPDWIFRFKNTLLSAPVLMVDANLSHPSLEAAC 155

Query: 1553 QLAGEFSIPLWFEPVSITKSVRISSIINYITFASPNVNELISMANALSLNKKFDFITKSF 1374
            ++A +   P+WFEPVS+TKS RISSI+ Y+TFASPN +ELI+MANALS + +F  + +S 
Sbjct: 156  KMAIDMECPVWFEPVSVTKSRRISSIVEYVTFASPNEDELIAMANALSGSDEFHPLKESQ 215

Query: 1373 Q---SIETLFQMLKPAICVLLEKGVNVLIVTLGSYGVFVCCTGGP-DFINEALNRRTASC 1206
            +   S+ +LFQMLKPAI VLLEKG+ V++VT GS GVF+C  G P  F   A   +T  C
Sbjct: 216  KKNISVLSLFQMLKPAIWVLLEKGIKVVLVTFGSNGVFLCNKGWPRQFKMPA--EKTNQC 273

Query: 1205 SSR-QLYELVNNSSLANRFHCNTETGMKSSSFAYHFPSLPASVVSLTGAGDCLVGGILAS 1029
              R QL++ V      +R+   +E    S  FA HFPSLPASVV LTGAGDCLVGG L S
Sbjct: 274  GFRGQLFKTVMQKCPPSRYSGFSELDRSSHLFAVHFPSLPASVVRLTGAGDCLVGGTLTS 333

Query: 1028 ICAGIDLMQSIAVGITVAKAAVEAESNVPAKYSLTTIKDEAVKIMSSAQPL 876
            ICAG+D+MQS++VGI VAKA VE E+NVP+ +SL+ I D+A  + S A+ L
Sbjct: 334  ICAGLDIMQSVSVGIAVAKAVVEVEANVPSTFSLSAITDDAKSVYSGAKVL 384


>ref|XP_002519085.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541748|gb|EEF43296.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1157

 Score =  355 bits (912), Expect = 2e-95
 Identities = 188/339 (55%), Positives = 242/339 (71%), Gaps = 3/339 (0%)
 Frame = -3

Query: 1913 VQYVSGGVARNVAECMSKLGTRPFIISVVGLDMAGELLLKYWKSAGLSTEGILKLQGIAT 1734
            VQY  GGVARN+AECMSKLGT+P++IS +G DMAG LLL++W SAGLSTEGI K Q I T
Sbjct: 73   VQYALGGVARNIAECMSKLGTKPYMISALGNDMAGNLLLEHWNSAGLSTEGIQKHQKIRT 132

Query: 1733 PVVSNVYDCSGXXXXXXXXXXXXETFVTPQWIQKFSHKIRSAPVVMVDANLNPQALKAAC 1554
             V+SN++D  G            E F+TP+WI +   KI SA V++VDANL P AL+A+C
Sbjct: 133  AVISNIFDAHGEVAAGVADVEAVEKFLTPEWILQCKCKISSASVLLVDANLTPPALEASC 192

Query: 1553 QLAGEFSIPLWFEPVSITKSVRISSIINYITFASPNVNELISMANALSLNKKFDFITKSF 1374
            Q+A E++IP+WFEPVS+ KS RI+SI++ +TFASPN +ELI+MANALS    F  I +  
Sbjct: 193  QVAAEYNIPVWFEPVSVAKSTRIASIVSDVTFASPNEDELIAMANALSCASIFHPIDRDS 252

Query: 1373 Q---SIETLFQMLKPAICVLLEKGVNVLIVTLGSYGVFVCCTGGPDFINEALNRRTASCS 1203
                S E+LFQMLKPAI VLLEKG+  + VTLG+ GVF+C T  P+F    L R      
Sbjct: 253  SKKYSTESLFQMLKPAILVLLEKGIKTVAVTLGANGVFLCST-EPNFTRTRLERTKKYGY 311

Query: 1202 SRQLYELVNNSSLANRFHCNTETGMKSSSFAYHFPSLPASVVSLTGAGDCLVGGILASIC 1023
            +  LY+++ +S  +++F    +T   S   A HFP+LPASVV LTGAGDCLVGG LAS+C
Sbjct: 312  NGSLYDIIESSCPSSKFSDALQTQGSSHLLAVHFPTLPASVVRLTGAGDCLVGGTLASLC 371

Query: 1022 AGIDLMQSIAVGITVAKAAVEAESNVPAKYSLTTIKDEA 906
            +G+D+MQS+AVGI VAK AVE E NVP+ +SL +I D+A
Sbjct: 372  SGLDIMQSMAVGIVVAKTAVETEGNVPSAFSLASISDDA 410


>ref|XP_002306090.1| predicted protein [Populus trichocarpa] gi|222849054|gb|EEE86601.1|
            predicted protein [Populus trichocarpa]
          Length = 384

 Score =  354 bits (909), Expect = 4e-95
 Identities = 191/348 (54%), Positives = 248/348 (71%), Gaps = 4/348 (1%)
 Frame = -3

Query: 1913 VQYVSGGVARNVAECMSKLGTRPFIISVVGLDMAGELLLKYWKSAGLSTE-GILKLQGIA 1737
            V YV GGVARN+AECMSKLGT+P++IS +G DMAG+LLL++W SA LSTE GI+K Q I 
Sbjct: 30   VHYVLGGVARNIAECMSKLGTKPYMISALGNDMAGKLLLEHWNSASLSTEVGIMKHQDIK 89

Query: 1736 TPVVSNVYDCSGXXXXXXXXXXXXETFVTPQWIQKFSHKIRSAPVVMVDANLNPQALKAA 1557
            TPV+ N++D  G            E F+T  WIQ+    I  APV+MVDANL+  AL+A+
Sbjct: 90   TPVICNIFDTEGELAAAVASVEAVEKFLTSSWIQQSKQNIFCAPVMMVDANLSLPALEAS 149

Query: 1556 CQLAGEFSIPLWFEPVSITKSVRISSIINYITFASPNVNELISMANALSLNKKFDFITKS 1377
            CQLA E + P+WFEPVS+ KS RI S+  Y+TFASPN +ELI+MANALS    F  I + 
Sbjct: 150  CQLAAESNTPVWFEPVSVAKSRRIVSVAKYVTFASPNEDELIAMANALSHENMFRHIERD 209

Query: 1376 FQS---IETLFQMLKPAICVLLEKGVNVLIVTLGSYGVFVCCTGGPDFINEALNRRTASC 1206
              S   +E+LFQ LKPAI VLLEKG+ ++ VTLG+ GVF+C + GP+ +  +L+R     
Sbjct: 210  SNSRCSVESLFQFLKPAILVLLEKGIKIVAVTLGADGVFLC-SRGPNVVRFSLDRTKKYG 268

Query: 1205 SSRQLYELVNNSSLANRFHCNTETGMKSSSFAYHFPSLPASVVSLTGAGDCLVGGILASI 1026
             S QLY+ V +S  ++RF    +    S  F+ HFP+LPASVV LTGAGDCLVGG LAS+
Sbjct: 269  VSGQLYDKVVSSCPSSRFSGALQIERSSHLFSVHFPALPASVVRLTGAGDCLVGGTLASL 328

Query: 1025 CAGIDLMQSIAVGITVAKAAVEAESNVPAKYSLTTIKDEAVKIMSSAQ 882
            C+G+D+MQSIAVGI  AK+AVE E+NVP+++SL TI D+A  I S+A+
Sbjct: 329  CSGLDIMQSIAVGIAAAKSAVEGEANVPSEFSLATITDDARSIYSAAK 376


>ref|XP_003607889.1| Sugar kinase, putative [Medicago truncatula]
            gi|85719355|gb|ABC75360.1| Carbohydrate kinase, PfkB
            [Medicago truncatula] gi|355508944|gb|AES90086.1| Sugar
            kinase, putative [Medicago truncatula]
          Length = 421

 Score =  347 bits (891), Expect = 5e-93
 Identities = 183/350 (52%), Positives = 243/350 (69%), Gaps = 4/350 (1%)
 Frame = -3

Query: 1913 VQYVSGGVARNVAECMSKLGTRPFIISVVGLDMAGELLLKYWKSAGLSTEGILKLQGIAT 1734
            V YV GGVARNVAECMSKLG +P++IS +G DMAG LLL++WK+AGLSTEGILK + I T
Sbjct: 66   VYYVQGGVARNVAECMSKLGAKPYMISALGFDMAGNLLLEHWKTAGLSTEGILKNKDIET 125

Query: 1733 PVVSNVYDCSGXXXXXXXXXXXXETFVTPQWIQKFSHKIRSAPVVMVDANLNPQALKAAC 1554
            PVV N++D +G            E ++TP WI  F   +  APV+MVDANL+  +L+A+C
Sbjct: 126  PVVCNIFDVNGEVAAGVASVEALEKYLTPDWILCFKSTLLYAPVLMVDANLSGPSLEASC 185

Query: 1553 QLAGEFSIPLWFEPVSITKSVRISSIINYITFASPNVNELISMANALSLNKKFDFITKSF 1374
            ++A +   P+WFEPVS+TKS RI S+  Y+TFASPN +ELI+MANALS + +F  + +  
Sbjct: 186  KMAADTGCPVWFEPVSVTKSQRIRSVAKYVTFASPNEDELIAMANALSGSNEFRPLKEDH 245

Query: 1373 Q----SIETLFQMLKPAICVLLEKGVNVLIVTLGSYGVFVCCTGGPDFINEALNRRTASC 1206
            +    S  +LFQ+LKPA+ VLL KG+ V++VTLGS GVF+C  GGP      + +   + 
Sbjct: 246  KKDNLSPGSLFQILKPAVLVLLGKGIKVVLVTLGSNGVFLCSKGGPSCYKFPVAKTNRTG 305

Query: 1205 SSRQLYELVNNSSLANRFHCNTETGMKSSSFAYHFPSLPASVVSLTGAGDCLVGGILASI 1026
               QLY+ V  +   N +   +E  + +  FA H PSLPASVV LTGAGDCLVGG L SI
Sbjct: 306  FGGQLYKSVMQNCPPNCYSGFSELDISNRLFAVHLPSLPASVVRLTGAGDCLVGGTLTSI 365

Query: 1025 CAGIDLMQSIAVGITVAKAAVEAESNVPAKYSLTTIKDEAVKIMSSAQPL 876
            CAG+D+MQS++VGI VAKAAVE E+NVP+ +SL +I D+A  +   A+ L
Sbjct: 366  CAGLDIMQSVSVGIAVAKAAVEVETNVPSAFSLASIADDARSVFCHAKVL 415


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