BLASTX nr result

ID: Dioscorea21_contig00007269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007269
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA43972.1| TPA: hypothetical protein ZEAMMB73_704083, parti...    65   4e-09
ref|XP_002465697.1| hypothetical protein SORBIDRAFT_01g043970 [S...    65   4e-09
gb|ACR37102.1| unknown [Zea mays]                                      65   4e-09
ref|NP_001131365.1| uncharacterized protein LOC100192688 [Zea ma...    65   4e-09
gb|EEC74688.1| hypothetical protein OsI_10387 [Oryza sativa Indi...    65   8e-09

>tpg|DAA43972.1| TPA: hypothetical protein ZEAMMB73_704083, partial [Zea mays]
          Length = 177

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +3

Query: 3   DTEELQLWDQQIVGLCQALNDILDSMTSKGVMVPV 107
           DTEELQ WDQQI GLCQALNDILDSM+SKG+ +PV
Sbjct: 143 DTEELQQWDQQIAGLCQALNDILDSMSSKGITIPV 177


>ref|XP_002465697.1| hypothetical protein SORBIDRAFT_01g043970 [Sorghum bicolor]
           gi|241919551|gb|EER92695.1| hypothetical protein
           SORBIDRAFT_01g043970 [Sorghum bicolor]
          Length = 399

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +3

Query: 3   DTEELQLWDQQIVGLCQALNDILDSMTSKGVMVPV 107
           DTEELQ WDQQI GLCQALNDILDSM+SKG+ +PV
Sbjct: 365 DTEELQQWDQQIAGLCQALNDILDSMSSKGIAIPV 399


>gb|ACR37102.1| unknown [Zea mays]
          Length = 57

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +3

Query: 3   DTEELQLWDQQIVGLCQALNDILDSMTSKGVMVPV 107
           DTEELQ WDQQI GLCQALNDILDSM+SKG+ +PV
Sbjct: 23  DTEELQQWDQQIAGLCQALNDILDSMSSKGITIPV 57


>ref|NP_001131365.1| uncharacterized protein LOC100192688 [Zea mays]
           gi|194691326|gb|ACF79747.1| unknown [Zea mays]
           gi|195639514|gb|ACG39225.1| COP9 signalosome complex
           subunit 4 [Zea mays] gi|414865414|tpg|DAA43971.1| TPA:
           COP9 signalosome complex subunit 4 [Zea mays]
          Length = 399

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +3

Query: 3   DTEELQLWDQQIVGLCQALNDILDSMTSKGVMVPV 107
           DTEELQ WDQQI GLCQALNDILDSM+SKG+ +PV
Sbjct: 365 DTEELQQWDQQIAGLCQALNDILDSMSSKGITIPV 399


>gb|EEC74688.1| hypothetical protein OsI_10387 [Oryza sativa Indica Group]
          Length = 399

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +3

Query: 3   DTEELQLWDQQIVGLCQALNDILDSMTSKGVMVPV 107
           DTEELQ WDQQI GLCQALNDILDSM+SKG+ +PV
Sbjct: 365 DTEELQQWDQQIAGLCQALNDILDSMSSKGMAIPV 399


Top