BLASTX nr result

ID: Dioscorea21_contig00007259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007259
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140655.1| PREDICTED: 40S ribosomal protein S27-2-like ...   182   4e-44
emb|CBI21255.3| unnamed protein product [Vitis vinifera]              181   7e-44
ref|XP_002273119.1| PREDICTED: 40S ribosomal protein S27-2 [Viti...   181   7e-44
gb|ABA40465.1| ribosomal protein S27-like protein [Solanum tuber...   179   3e-43
emb|CBI29279.3| unnamed protein product [Vitis vinifera]              179   3e-43

>ref|XP_004140655.1| PREDICTED: 40S ribosomal protein S27-2-like [Cucumis sativus]
           gi|449487447|ref|XP_004157631.1| PREDICTED: 40S
           ribosomal protein S27-2-like [Cucumis sativus]
          Length = 161

 Score =  182 bits (462), Expect = 4e-44
 Identities = 86/97 (88%), Positives = 91/97 (93%)
 Frame = +1

Query: 34  FLQLLSKSIAKMVLPNDIDLLNPPAELEKRRHKLKRLVQSPNSFFMDVKCQGCFNITTVF 213
           ++QL+S S    VL NDIDLLNPPAELEKR+HKLKRLVQSPNSFFMDVKCQGCFNITTVF
Sbjct: 65  WIQLISVSSFNQVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVF 124

Query: 214 SHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRRKGD 324
           SHSQTVVVCGNCQTVLCQPTGGRA+LTEGCSFRRKGD
Sbjct: 125 SHSQTVVVCGNCQTVLCQPTGGRAKLTEGCSFRRKGD 161


>emb|CBI21255.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  181 bits (460), Expect = 7e-44
 Identities = 85/92 (92%), Positives = 88/92 (95%)
 Frame = +1

Query: 49  SKSIAKMVLPNDIDLLNPPAELEKRRHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQT 228
           +K   KMVLPNDIDLLNPPAELEKR+HKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQT
Sbjct: 69  AKVSTKMVLPNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQT 128

Query: 229 VVVCGNCQTVLCQPTGGRARLTEGCSFRRKGD 324
           VVVCGNCQ VLCQPTGGRARLTEGCSFR+KGD
Sbjct: 129 VVVCGNCQLVLCQPTGGRARLTEGCSFRKKGD 160


>ref|XP_002273119.1| PREDICTED: 40S ribosomal protein S27-2 [Vitis vinifera]
           gi|147771740|emb|CAN78160.1| hypothetical protein
           VITISV_040920 [Vitis vinifera]
          Length = 86

 Score =  181 bits (460), Expect = 7e-44
 Identities = 84/86 (97%), Positives = 86/86 (100%)
 Frame = +1

Query: 67  MVLPNDIDLLNPPAELEKRRHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 246
           MVLPNDIDLLNPPAE+EKR+HKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN
Sbjct: 1   MVLPNDIDLLNPPAEIEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60

Query: 247 CQTVLCQPTGGRARLTEGCSFRRKGD 324
           CQTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 61  CQTVLCQPTGGRARLTEGCSFRRKGD 86


>gb|ABA40465.1| ribosomal protein S27-like protein [Solanum tuberosum]
           gi|418729767|gb|AFX66976.1| ribosomal protein S27
           [Solanum tuberosum]
          Length = 86

 Score =  179 bits (455), Expect = 3e-43
 Identities = 83/86 (96%), Positives = 85/86 (98%)
 Frame = +1

Query: 67  MVLPNDIDLLNPPAELEKRRHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 246
           MVLPND+DLLNPPAE EKR+HKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN
Sbjct: 1   MVLPNDVDLLNPPAEQEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60

Query: 247 CQTVLCQPTGGRARLTEGCSFRRKGD 324
           CQTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 61  CQTVLCQPTGGRARLTEGCSFRRKGD 86


>emb|CBI29279.3| unnamed protein product [Vitis vinifera]
          Length = 87

 Score =  179 bits (455), Expect = 3e-43
 Identities = 83/85 (97%), Positives = 85/85 (100%)
 Frame = +1

Query: 70  VLPNDIDLLNPPAELEKRRHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 249
           VLPNDIDLLNPPAE+EKR+HKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC
Sbjct: 3   VLPNDIDLLNPPAEIEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNC 62

Query: 250 QTVLCQPTGGRARLTEGCSFRRKGD 324
           QTVLCQPTGGRARLTEGCSFRRKGD
Sbjct: 63  QTVLCQPTGGRARLTEGCSFRRKGD 87