BLASTX nr result
ID: Dioscorea21_contig00007233
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00007233
(1922 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001147940.1| serine palmitoyltransferase 1 [Zea mays] gi|... 481 e-136
tpg|DAA44417.1| TPA: hypothetical protein ZEAMMB73_428479 [Zea m... 475 e-135
ref|XP_002465548.1| hypothetical protein SORBIDRAFT_01g040920 [S... 475 e-134
ref|NP_001048451.2| Os02g0806900 [Oryza sativa Japonica Group] g... 473 e-134
gb|EAY87933.1| hypothetical protein OsI_09357 [Oryza sativa Indi... 471 e-133
>ref|NP_001147940.1| serine palmitoyltransferase 1 [Zea mays] gi|194699566|gb|ACF83867.1|
unknown [Zea mays] gi|194702792|gb|ACF85480.1| unknown
[Zea mays] gi|195614728|gb|ACG29194.1| serine
palmitoyltransferase 1 [Zea mays]
gi|223944627|gb|ACN26397.1| unknown [Zea mays]
gi|413956311|gb|AFW88960.1| Serine palmitoyltransferase 1
isoform 1 [Zea mays] gi|413956312|gb|AFW88961.1| Serine
palmitoyltransferase 1 isoform 2 [Zea mays]
gi|413956313|gb|AFW88962.1| Serine palmitoyltransferase 1
isoform 3 [Zea mays]
Length = 485
Score = 481 bits (1238), Expect(2) = e-136
Identities = 240/303 (79%), Positives = 256/303 (84%)
Frame = +1
Query: 307 GHXXXXXXXXXXXXFQLSRKSYKPPKKPLTEKEIDDLCDEWTPEPLHPPITEEMLSEPPT 486
GH FQLSRKSYKPPKKPLTEKEID+LCDEW PEPL PPI E + PT
Sbjct: 38 GHLVVEGLLIAVIVFQLSRKSYKPPKKPLTEKEIDELCDEWEPEPLCPPIKEGAKIDAPT 97
Query: 487 LESAAGPHTIIDGKEVVNFASANYLGLIGXXXXXXXXXXXXXXXXXXXXXXXXXPRGFYG 666
LESAAGPHTI+DGKEVVNFASANYLGLIG PRGFYG
Sbjct: 98 LESAAGPHTIVDGKEVVNFASANYLGLIGNEKIIDSCISSLEKYGVGSCG----PRGFYG 153
Query: 667 TIDVHLDCEARISKFLGTPDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLY 846
TIDVHLDCE++I+KFLGTPDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGL+
Sbjct: 154 TIDVHLDCESKIAKFLGTPDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLH 213
Query: 847 LSRSTIVYFKHNDMSSLKSTLEKVTRGNRRAEKIRRYIVVEAIYQNSGQIAPLDEIIRLK 1026
LSRST+VYFKHNDM+SL STLEK+TRGN+RAEKIRRYIVVE+IYQNSGQIAPLDEI+RLK
Sbjct: 214 LSRSTVVYFKHNDMASLASTLEKLTRGNKRAEKIRRYIVVESIYQNSGQIAPLDEIVRLK 273
Query: 1027 EKYRFRVVLDESHSFGVLGSSGRGLAEHYGVPVEKIDIITAGMGNALATDGGFCTGSVRV 1206
EKYRFRV+L+ESHSFGVLG SGRGLAEHYGVP+EKIDIITAGMGNALATDGGFCTGSVRV
Sbjct: 274 EKYRFRVILEESHSFGVLGKSGRGLAEHYGVPIEKIDIITAGMGNALATDGGFCTGSVRV 333
Query: 1207 VDH 1215
VDH
Sbjct: 334 VDH 336
Score = 32.3 bits (72), Expect(2) = e-136
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +2
Query: 188 VSVKFNAPLAGMVVFGVHIHG 250
VS FN PLA VVFGVHI G
Sbjct: 18 VSAAFNGPLARAVVFGVHIDG 38
Score = 128 bits (322), Expect = 5e-27
Identities = 63/103 (61%), Positives = 85/103 (82%)
Frame = +3
Query: 1365 LLWSEISELPGLILASNPLSPIVFLKLKRSTGSTKGDMKLLDEIVDRVLKEDLVFIVTTK 1544
LL E+S+ PGL ++S+ LSPIVFLKLK+STGS D+ LL+ I D+ LKED VF+VT+K
Sbjct: 381 LLHKELSDTPGLEISSHVLSPIVFLKLKKSTGSPTTDLDLLETIADKALKEDSVFVVTSK 440
Query: 1545 RSILDKCRLPVGLRIFVSAGHTESDLLKASNSLKRVTALVLSE 1673
+S LD+C+LP+G+R+FVSAGHTE D+ + S+SLKRV+A VLS+
Sbjct: 441 KSNLDRCKLPIGIRLFVSAGHTELDISRLSSSLKRVSASVLSD 483
>tpg|DAA44417.1| TPA: hypothetical protein ZEAMMB73_428479 [Zea mays]
Length = 485
Score = 475 bits (1223), Expect(2) = e-135
Identities = 237/303 (78%), Positives = 253/303 (83%)
Frame = +1
Query: 307 GHXXXXXXXXXXXXFQLSRKSYKPPKKPLTEKEIDDLCDEWTPEPLHPPITEEMLSEPPT 486
GH FQLSRKSYKPPKKPLTEKEID+LCDEW PEPL PP+ E + P
Sbjct: 38 GHLVVEGLLIAVIVFQLSRKSYKPPKKPLTEKEIDELCDEWEPEPLCPPVKEGARIDTPM 97
Query: 487 LESAAGPHTIIDGKEVVNFASANYLGLIGXXXXXXXXXXXXXXXXXXXXXXXXXPRGFYG 666
LESAAGPHTI+DGKEVVNFASANYLGLIG PRGFYG
Sbjct: 98 LESAAGPHTIVDGKEVVNFASANYLGLIGNEKIIDSCIGSLEKYGVGSCG----PRGFYG 153
Query: 667 TIDVHLDCEARISKFLGTPDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLY 846
TIDVHLDCE++I+KFLGTPDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGL+
Sbjct: 154 TIDVHLDCESKIAKFLGTPDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLH 213
Query: 847 LSRSTIVYFKHNDMSSLKSTLEKVTRGNRRAEKIRRYIVVEAIYQNSGQIAPLDEIIRLK 1026
LSRST+VYFKHNDM SL STLEK+T GN+RAEKIRRYIVVE+IYQNSGQIAPLDEI+RLK
Sbjct: 214 LSRSTVVYFKHNDMVSLASTLEKLTHGNKRAEKIRRYIVVESIYQNSGQIAPLDEIVRLK 273
Query: 1027 EKYRFRVVLDESHSFGVLGSSGRGLAEHYGVPVEKIDIITAGMGNALATDGGFCTGSVRV 1206
EKYRFRV+L+ESHSFGVLG SGRGLAEHYGVP+EKIDIITAGMGNALATDGGFCTGSVRV
Sbjct: 274 EKYRFRVILEESHSFGVLGKSGRGLAEHYGVPIEKIDIITAGMGNALATDGGFCTGSVRV 333
Query: 1207 VDH 1215
VDH
Sbjct: 334 VDH 336
Score = 33.9 bits (76), Expect(2) = e-135
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +2
Query: 188 VSVKFNAPLAGMVVFGVHIHG 250
VS FNAPLA VVFGVHI G
Sbjct: 18 VSAAFNAPLARAVVFGVHIDG 38
Score = 128 bits (322), Expect = 5e-27
Identities = 66/103 (64%), Positives = 84/103 (81%)
Frame = +3
Query: 1365 LLWSEISELPGLILASNPLSPIVFLKLKRSTGSTKGDMKLLDEIVDRVLKEDLVFIVTTK 1544
LL E+S+ PGL + S+ LSPIVFLKLK+STGS D+ LL+ I RVLKED V IVT+K
Sbjct: 381 LLHKELSDTPGLEIFSHVLSPIVFLKLKKSTGSPTTDLDLLETIAGRVLKEDSVLIVTSK 440
Query: 1545 RSILDKCRLPVGLRIFVSAGHTESDLLKASNSLKRVTALVLSE 1673
+S LD+C+LPVG+R+FVSAGHTESD+ + S+SLKRV+A VLS+
Sbjct: 441 KSNLDRCKLPVGIRLFVSAGHTESDISRLSSSLKRVSAAVLSD 483
>ref|XP_002465548.1| hypothetical protein SORBIDRAFT_01g040920 [Sorghum bicolor]
gi|241919402|gb|EER92546.1| hypothetical protein
SORBIDRAFT_01g040920 [Sorghum bicolor]
Length = 485
Score = 475 bits (1222), Expect(2) = e-134
Identities = 237/303 (78%), Positives = 253/303 (83%)
Frame = +1
Query: 307 GHXXXXXXXXXXXXFQLSRKSYKPPKKPLTEKEIDDLCDEWTPEPLHPPITEEMLSEPPT 486
GH FQLSRKSYKPPKKPLTEKEID+LCDEW PEPL PPI E + P
Sbjct: 38 GHLVVEGLLIAVIVFQLSRKSYKPPKKPLTEKEIDELCDEWEPEPLCPPIKEGARIDTPM 97
Query: 487 LESAAGPHTIIDGKEVVNFASANYLGLIGXXXXXXXXXXXXXXXXXXXXXXXXXPRGFYG 666
LESAAGPHTI+DGKEVVNFASANYLGLIG PRGFYG
Sbjct: 98 LESAAGPHTIVDGKEVVNFASANYLGLIGNEKIIDSCIGSLEKYGVGSCG----PRGFYG 153
Query: 667 TIDVHLDCEARISKFLGTPDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLY 846
TIDVHLDCE++I+ FLGTPDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGL+
Sbjct: 154 TIDVHLDCESKIANFLGTPDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLH 213
Query: 847 LSRSTIVYFKHNDMSSLKSTLEKVTRGNRRAEKIRRYIVVEAIYQNSGQIAPLDEIIRLK 1026
LSRST+VYFKHNDM+SL STLEK+T GN+RAEKIRRYIVVE+IYQNSGQIAPLDEI+RLK
Sbjct: 214 LSRSTVVYFKHNDMASLASTLEKLTHGNKRAEKIRRYIVVESIYQNSGQIAPLDEIVRLK 273
Query: 1027 EKYRFRVVLDESHSFGVLGSSGRGLAEHYGVPVEKIDIITAGMGNALATDGGFCTGSVRV 1206
EKYRFRV+L+ESHSFGVLG SGRGLAEHYGVP+EKIDIITAGMGNALATDGGFCTGSVRV
Sbjct: 274 EKYRFRVILEESHSFGVLGKSGRGLAEHYGVPIEKIDIITAGMGNALATDGGFCTGSVRV 333
Query: 1207 VDH 1215
VDH
Sbjct: 334 VDH 336
Score = 33.9 bits (76), Expect(2) = e-134
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +2
Query: 188 VSVKFNAPLAGMVVFGVHIHG 250
VS FNAPLA VVFGVHI G
Sbjct: 18 VSAAFNAPLARAVVFGVHIDG 38
Score = 132 bits (331), Expect = 4e-28
Identities = 66/103 (64%), Positives = 87/103 (84%)
Frame = +3
Query: 1365 LLWSEISELPGLILASNPLSPIVFLKLKRSTGSTKGDMKLLDEIVDRVLKEDLVFIVTTK 1544
LL E+S+ PGL ++S+ LSPIVFLKLK+STGS D+ LL+ I D+VLKED VFIVT+K
Sbjct: 381 LLHKELSDTPGLEISSHVLSPIVFLKLKKSTGSPTTDLDLLETIADKVLKEDSVFIVTSK 440
Query: 1545 RSILDKCRLPVGLRIFVSAGHTESDLLKASNSLKRVTALVLSE 1673
+S LD+C+LP+G+R+FVSAGHTESD+ + S+SLKRV+A VLS+
Sbjct: 441 KSNLDRCKLPLGIRLFVSAGHTESDISRLSSSLKRVSASVLSD 483
>ref|NP_001048451.2| Os02g0806900 [Oryza sativa Japonica Group]
gi|75125967|sp|Q6K8E7.1|LCB1B_ORYSJ RecName: Full=Long
chain base biosynthesis protein 1b
gi|47497351|dbj|BAD19391.1| putative serine
palmitoyltransferase LCB1 subunit [Oryza sativa Japonica
Group] gi|215707260|dbj|BAG93720.1| unnamed protein
product [Oryza sativa Japonica Group]
gi|215740738|dbj|BAG97394.1| unnamed protein product
[Oryza sativa Japonica Group] gi|222623881|gb|EEE58013.1|
hypothetical protein OsJ_08792 [Oryza sativa Japonica
Group] gi|255671334|dbj|BAF10365.2| Os02g0806900 [Oryza
sativa Japonica Group]
Length = 481
Score = 473 bits (1218), Expect(2) = e-134
Identities = 236/303 (77%), Positives = 251/303 (82%)
Frame = +1
Query: 307 GHXXXXXXXXXXXXFQLSRKSYKPPKKPLTEKEIDDLCDEWTPEPLHPPITEEMLSEPPT 486
GH FQLSRKSYKPPKKPLTE+E+D+LCDEW PEPL PPI E E PT
Sbjct: 38 GHLVVEGLLIAAILFQLSRKSYKPPKKPLTEREVDELCDEWQPEPLCPPIKEGARIEAPT 97
Query: 487 LESAAGPHTIIDGKEVVNFASANYLGLIGXXXXXXXXXXXXXXXXXXXXXXXXXPRGFYG 666
LESAAGPHTI+DGKEVVNFASANYLGLIG PRGFYG
Sbjct: 98 LESAAGPHTIVDGKEVVNFASANYLGLIGNEKILDSCIGSVEKYGVGSCG----PRGFYG 153
Query: 667 TIDVHLDCEARISKFLGTPDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLY 846
TIDVHLDCE +I+KFLGT DSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGL
Sbjct: 154 TIDVHLDCETKIAKFLGTQDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLQ 213
Query: 847 LSRSTIVYFKHNDMSSLKSTLEKVTRGNRRAEKIRRYIVVEAIYQNSGQIAPLDEIIRLK 1026
LSRST+VYFKHNDM+SL STLEK+T GN+R EKIRRYIVVEAIYQNSGQIAPLDEI+RLK
Sbjct: 214 LSRSTVVYFKHNDMASLASTLEKLTHGNKRTEKIRRYIVVEAIYQNSGQIAPLDEIVRLK 273
Query: 1027 EKYRFRVVLDESHSFGVLGSSGRGLAEHYGVPVEKIDIITAGMGNALATDGGFCTGSVRV 1206
EKYRFRV+L+ESHSFGVLG SGRGLAEHYGVP+EKIDIITAGMGNALATDGGFCTGS+RV
Sbjct: 274 EKYRFRVILEESHSFGVLGKSGRGLAEHYGVPIEKIDIITAGMGNALATDGGFCTGSIRV 333
Query: 1207 VDH 1215
VDH
Sbjct: 334 VDH 336
Score = 33.5 bits (75), Expect(2) = e-134
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 188 VSVKFNAPLAGMVVFGVHIHG 250
VS FNAPLA VVFG+HI G
Sbjct: 18 VSAMFNAPLARAVVFGIHIDG 38
Score = 134 bits (336), Expect = 1e-28
Identities = 70/101 (69%), Positives = 82/101 (81%)
Frame = +3
Query: 1365 LLWSEISELPGLILASNPLSPIVFLKLKRSTGSTKGDMKLLDEIVDRVLKEDLVFIVTTK 1544
LL E+S++ GL +ASN LSPIVFLKLK STGS D++LL+ I ++VLKED VFI TK
Sbjct: 381 LLHKELSDVQGLEIASNILSPIVFLKLKTSTGSAVADLELLEVISEKVLKEDSVFIAATK 440
Query: 1545 RSILDKCRLPVGLRIFVSAGHTESDLLKASNSLKRVTALVL 1667
RS LDKCRLPVG+R+FVSAGHTESD+LK S SLKRV A VL
Sbjct: 441 RSSLDKCRLPVGIRLFVSAGHTESDILKVSESLKRVAASVL 481
>gb|EAY87933.1| hypothetical protein OsI_09357 [Oryza sativa Indica Group]
Length = 481
Score = 471 bits (1213), Expect(2) = e-133
Identities = 235/303 (77%), Positives = 250/303 (82%)
Frame = +1
Query: 307 GHXXXXXXXXXXXXFQLSRKSYKPPKKPLTEKEIDDLCDEWTPEPLHPPITEEMLSEPPT 486
GH FQLSRKSYKPPKKPLTE+E+D+LCDEW PEPL PPI E E PT
Sbjct: 38 GHLVIEGLLIAAILFQLSRKSYKPPKKPLTEREVDELCDEWQPEPLCPPIKEGARIEAPT 97
Query: 487 LESAAGPHTIIDGKEVVNFASANYLGLIGXXXXXXXXXXXXXXXXXXXXXXXXXPRGFYG 666
LESAAGPHT +DGKEVVNFASANYLGLIG PRGFYG
Sbjct: 98 LESAAGPHTTVDGKEVVNFASANYLGLIGNEKILDSCIGSVEKYGVGSCG----PRGFYG 153
Query: 667 TIDVHLDCEARISKFLGTPDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLY 846
TIDVHLDCE +I+KFLGT DSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGL
Sbjct: 154 TIDVHLDCETKIAKFLGTQDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLQ 213
Query: 847 LSRSTIVYFKHNDMSSLKSTLEKVTRGNRRAEKIRRYIVVEAIYQNSGQIAPLDEIIRLK 1026
LSRST+VYFKHNDM+SL STLEK+T GN+R EKIRRYIVVEAIYQNSGQIAPLDEI+RLK
Sbjct: 214 LSRSTVVYFKHNDMASLASTLEKLTHGNKRTEKIRRYIVVEAIYQNSGQIAPLDEIVRLK 273
Query: 1027 EKYRFRVVLDESHSFGVLGSSGRGLAEHYGVPVEKIDIITAGMGNALATDGGFCTGSVRV 1206
EKYRFRV+L+ESHSFGVLG SGRGLAEHYGVP+EKIDIITAGMGNALATDGGFCTGS+RV
Sbjct: 274 EKYRFRVILEESHSFGVLGKSGRGLAEHYGVPIEKIDIITAGMGNALATDGGFCTGSIRV 333
Query: 1207 VDH 1215
VDH
Sbjct: 334 VDH 336
Score = 33.5 bits (75), Expect(2) = e-133
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 188 VSVKFNAPLAGMVVFGVHIHG 250
VS FNAPLA VVFG+HI G
Sbjct: 18 VSAMFNAPLARAVVFGIHIDG 38
Score = 134 bits (337), Expect = 9e-29
Identities = 70/101 (69%), Positives = 83/101 (82%)
Frame = +3
Query: 1365 LLWSEISELPGLILASNPLSPIVFLKLKRSTGSTKGDMKLLDEIVDRVLKEDLVFIVTTK 1544
LL E+S++ GL +ASN LSPIVFLKLK STGS+ D++LL+ I ++VLKED VFI TK
Sbjct: 381 LLHKELSDVQGLEIASNILSPIVFLKLKTSTGSSVADLELLEVISEKVLKEDSVFIAATK 440
Query: 1545 RSILDKCRLPVGLRIFVSAGHTESDLLKASNSLKRVTALVL 1667
RS LDKCRLPVG+R+FVSAGHTESD+LK S SLKRV A VL
Sbjct: 441 RSSLDKCRLPVGIRLFVSAGHTESDILKVSESLKRVAASVL 481