BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007222
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|1...   197   2e-48
ref|XP_002304120.1| predicted protein [Populus trichocarpa] gi|2...   197   4e-48
ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|2235447...   195   1e-47
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275...   193   4e-47
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...   189   6e-46

>ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|118489961|gb|ABK96777.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222873302|gb|EEF10433.1| predicted protein [Populus
           trichocarpa]
          Length = 128

 Score =  197 bits (502), Expect = 2e-48
 Identities = 100/127 (78%), Positives = 107/127 (84%)
 Frame = +3

Query: 249 SWAGPEDVFLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAVLEGACERVIVGDLY 428
           SWAGPED++LSTSLA+Y                 +LRSFDQFANAVLEGACERVIVGDLY
Sbjct: 2   SWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDLY 61

Query: 429 CDIHLGLYVIRGENVVLIGELDLERQELPAHMICVSEAEIRRAQKAERDATDLKGSMRKR 608
           CDIHLGLYVIRGENVVLIGELDLER+ELP HM  VSEAEIRRAQKAER+ATDLKG+MRKR
Sbjct: 62  CDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRKR 121

Query: 609 MEFLDLD 629
           MEFLDLD
Sbjct: 122 MEFLDLD 128


>ref|XP_002304120.1| predicted protein [Populus trichocarpa] gi|222841552|gb|EEE79099.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  197 bits (500), Expect = 4e-48
 Identities = 100/127 (78%), Positives = 106/127 (83%)
 Frame = +3

Query: 249 SWAGPEDVFLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAVLEGACERVIVGDLY 428
           SWAGPED++LSTSLASY                 ILRSFDQFANAVLEGACER IVGDLY
Sbjct: 2   SWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDLY 61

Query: 429 CDIHLGLYVIRGENVVLIGELDLERQELPAHMICVSEAEIRRAQKAERDATDLKGSMRKR 608
           CDIHLGLYVIRGENVVLIGELDLER+ELP HM  VSEAEI+RAQKAER+ATDLKG+MRKR
Sbjct: 62  CDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGTMRKR 121

Query: 609 MEFLDLD 629
           MEFLDLD
Sbjct: 122 MEFLDLD 128


>ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|223544736|gb|EEF46252.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  195 bits (496), Expect = 1e-47
 Identities = 98/127 (77%), Positives = 106/127 (83%)
 Frame = +3

Query: 249 SWAGPEDVFLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAVLEGACERVIVGDLY 428
           SWAGP+D+FLSTSLA+Y                 ILRSFDQFAN VLEGACERVIVGDLY
Sbjct: 2   SWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGDLY 61

Query: 429 CDIHLGLYVIRGENVVLIGELDLERQELPAHMICVSEAEIRRAQKAERDATDLKGSMRKR 608
           CDI LGLYVIRGENVVLIGELDLE++ELP+HM CVSEAEI+RAQKAER+ATDLKGSMRKR
Sbjct: 62  CDILLGLYVIRGENVVLIGELDLEKEELPSHMTCVSEAEIKRAQKAEREATDLKGSMRKR 121

Query: 609 MEFLDLD 629
           MEFLD D
Sbjct: 122 MEFLDFD 128


>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  193 bits (491), Expect = 4e-47
 Identities = 99/127 (77%), Positives = 105/127 (82%)
 Frame = +3

Query: 249 SWAGPEDVFLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAVLEGACERVIVGDLY 428
           SWAGPED++LSTSLASY                 ILRSFDQFANAVLEGACERVIVGDLY
Sbjct: 2   SWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDLY 61

Query: 429 CDIHLGLYVIRGENVVLIGELDLERQELPAHMICVSEAEIRRAQKAERDATDLKGSMRKR 608
           CDI LGLY+IRGENVVLIGELDLE++ELP HM  VS AEIRRAQKAERDATDLKG+MRKR
Sbjct: 62  CDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRKR 121

Query: 609 MEFLDLD 629
           MEFLDLD
Sbjct: 122 MEFLDLD 128


>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  189 bits (481), Expect = 6e-46
 Identities = 97/127 (76%), Positives = 105/127 (82%)
 Frame = +3

Query: 249 SWAGPEDVFLSTSLASYXXXXXXXXXXXXXXXXXILRSFDQFANAVLEGACERVIVGDLY 428
           SWAGPED++LSTSLASY                 ILRSFDQFANAVLEGACERVIVGDLY
Sbjct: 2   SWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDLY 61

Query: 429 CDIHLGLYVIRGENVVLIGELDLERQELPAHMICVSEAEIRRAQKAERDATDLKGSMRKR 608
           CDI LGLYVIRGENVVLIGELDLE++ELP HM  VS AEI+RAQKAER+A+DLKG+MRKR
Sbjct: 62  CDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRKR 121

Query: 609 MEFLDLD 629
           MEFLDLD
Sbjct: 122 MEFLDLD 128