BLASTX nr result

ID: Dioscorea21_contig00007208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007208
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFS88925.1| chloroplast photosystem I reaction center subunit...   191   7e-47
gb|AFS88924.1| chloroplast photosystem I reaction center subunit...   191   7e-47
ref|NP_175963.1| photosystem I reaction center subunit V [Arabid...   188   8e-46
gb|AFK46340.1| unknown [Medicago truncatula]                          187   1e-45
gb|AFK35685.1| unknown [Lotus japonicus] gi|388506172|gb|AFK4115...   186   3e-45

>gb|AFS88925.1| chloroplast photosystem I reaction center subunit V-2 [Musa AB
           Group] gi|421958217|gb|AFX72947.1| photosystem I
           reaction center subunit V-2 [Musa AB Group]
          Length = 160

 Score =  191 bits (486), Expect = 7e-47
 Identities = 92/100 (92%), Positives = 96/100 (96%)
 Frame = -3

Query: 552 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDVRAQEFVGILN 373
           ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNG THFEAGD RA+E+VG+L 
Sbjct: 61  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDTRAKEYVGLLK 120

Query: 372 SNDPVGFNIVDVLAWGSIGHIVAYYILATTSNGYDPNFFG 253
           SNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FFG
Sbjct: 121 SNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 160


>gb|AFS88924.1| chloroplast photosystem I reaction center subunit V-1 [Musa AB
           Group] gi|421958219|gb|AFX72948.1| photosystem I
           reaction center subunit V-1 [Musa AB Group]
          Length = 150

 Score =  191 bits (486), Expect = 7e-47
 Identities = 92/100 (92%), Positives = 96/100 (96%)
 Frame = -3

Query: 552 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDVRAQEFVGILN 373
           ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNG THFEAGD RA+E+VG+L 
Sbjct: 51  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDTRAKEYVGLLK 110

Query: 372 SNDPVGFNIVDVLAWGSIGHIVAYYILATTSNGYDPNFFG 253
           SNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FFG
Sbjct: 111 SNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 150


>ref|NP_175963.1| photosystem I reaction center subunit V [Arabidopsis thaliana]
           gi|20143884|sp|Q9S7N7.1|PSAG_ARATH RecName:
           Full=Photosystem I reaction center subunit V,
           chloroplastic; AltName: Full=PSI-G; Flags: Precursor
           gi|11692916|gb|AAG40061.1|AF324710_1 At1g55670
           [Arabidopsis thaliana]
           gi|11908046|gb|AAG41452.1|AF326870_1 putative
           photosystem I subunit V precursor [Arabidopsis thaliana]
           gi|12642864|gb|AAK00374.1|AF339692_1 putative
           photosystem I subunit V precursor [Arabidopsis thaliana]
           gi|14190363|gb|AAK55662.1|AF378859_1 At1g55670/F20N2_3
           [Arabidopsis thaliana] gi|5734520|emb|CAB52748.1|
           photosystem I subunit V precursor [Arabidopsis thaliana]
           gi|15215865|gb|AAK91476.1| At1g55670/F20N2_3
           [Arabidopsis thaliana] gi|332195160|gb|AEE33281.1|
           photosystem I reaction center subunit V [Arabidopsis
           thaliana]
          Length = 160

 Score =  188 bits (477), Expect = 8e-46
 Identities = 89/100 (89%), Positives = 97/100 (97%)
 Frame = -3

Query: 552 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDVRAQEFVGILN 373
           EL+PS+VISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGD RA+E+V +L 
Sbjct: 61  ELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLLK 120

Query: 372 SNDPVGFNIVDVLAWGSIGHIVAYYILATTSNGYDPNFFG 253
           SNDP+GFNIVDVLAWGSIGHIVAYYILAT+SNGYDP+FFG
Sbjct: 121 SNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFFG 160


>gb|AFK46340.1| unknown [Medicago truncatula]
          Length = 162

 Score =  187 bits (475), Expect = 1e-45
 Identities = 89/100 (89%), Positives = 96/100 (96%)
 Frame = -3

Query: 552 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDVRAQEFVGILN 373
           ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNG THFEAGD RA+E+V +L 
Sbjct: 63  ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDKRAKEYVSLLK 122

Query: 372 SNDPVGFNIVDVLAWGSIGHIVAYYILATTSNGYDPNFFG 253
           SNDPVGFN+VDVLAWGS+GHIVAYYILAT+SNGYDP+FFG
Sbjct: 123 SNDPVGFNLVDVLAWGSLGHIVAYYILATSSNGYDPSFFG 162


>gb|AFK35685.1| unknown [Lotus japonicus] gi|388506172|gb|AFK41152.1| unknown
           [Lotus japonicus]
          Length = 162

 Score =  186 bits (472), Expect = 3e-45
 Identities = 90/100 (90%), Positives = 94/100 (94%)
 Frame = -3

Query: 552 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDVRAQEFVGILN 373
           ELN SLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNG THFEAGD RA+E+V +L 
Sbjct: 63  ELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGLTHFEAGDTRAKEYVSLLK 122

Query: 372 SNDPVGFNIVDVLAWGSIGHIVAYYILATTSNGYDPNFFG 253
           SNDPVGFNIVDVLAWGSIGHIVAYYILAT SNGYDP+FFG
Sbjct: 123 SNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDPSFFG 162


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