BLASTX nr result
ID: Dioscorea21_contig00007206
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00007206 (303 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273150.1| PREDICTED: staphylococcal nuclease domain-co... 44 7e-08 emb|CAN83456.1| hypothetical protein VITISV_034601 [Vitis vinifera] 44 7e-08 ref|XP_002322312.1| predicted protein [Populus trichocarpa] gi|2... 42 1e-06 gb|ACN40579.1| unknown [Picea sitchensis] 43 1e-06 emb|CAL38976.1| TUDOR protein with multiple SNc domains [Picea a... 43 1e-06 >ref|XP_002273150.1| PREDICTED: staphylococcal nuclease domain-containing protein 1 [Vitis vinifera] gi|296088151|emb|CBI35621.3| unnamed protein product [Vitis vinifera] Length = 1000 Score = 43.9 bits (102), Expect(3) = 7e-08 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 25/64 (39%) Frame = +2 Query: 65 KKTRTVSDLVAPRL-------------------------EVIFNIDHTVPSTGREFGSIF 169 ++T T+S L+APRL EV F +D+TVPS GREFGS+F Sbjct: 43 ERTITLSSLIAPRLARRGGVDEPFAWDSREYLRKLCIGKEVTFRVDYTVPSIGREFGSVF 102 Query: 170 L*DK 181 L DK Sbjct: 103 LGDK 106 Score = 31.2 bits (69), Expect(3) = 7e-08 Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = +1 Query: 1 KTVPSGDTLVIMGVSKSEFLPEKNT 75 K VPSGD LVIMG SK + P + T Sbjct: 21 KAVPSGDCLVIMGNSKGDSPPPERT 45 Score = 25.4 bits (54), Expect(3) = 7e-08 Identities = 10/13 (76%), Positives = 13/13 (100%) Frame = +1 Query: 184 VAMLVVSEGWAKV 222 V++LVVSEGWA+V Sbjct: 108 VSVLVVSEGWARV 120 >emb|CAN83456.1| hypothetical protein VITISV_034601 [Vitis vinifera] Length = 983 Score = 43.9 bits (102), Expect(3) = 7e-08 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 25/64 (39%) Frame = +2 Query: 65 KKTRTVSDLVAPRL-------------------------EVIFNIDHTVPSTGREFGSIF 169 ++T T+S L+APRL EV F +D+TVPS GREFGS+F Sbjct: 36 ERTITLSSLIAPRLARRGGVDEPFAWDSREYLRKLCIGKEVTFRVDYTVPSIGREFGSVF 95 Query: 170 L*DK 181 L DK Sbjct: 96 LGDK 99 Score = 31.2 bits (69), Expect(3) = 7e-08 Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = +1 Query: 1 KTVPSGDTLVIMGVSKSEFLPEKNT 75 K VPSGD LVIMG SK + P + T Sbjct: 14 KAVPSGDCLVIMGNSKGDSPPPERT 38 Score = 25.4 bits (54), Expect(3) = 7e-08 Identities = 10/13 (76%), Positives = 13/13 (100%) Frame = +1 Query: 184 VAMLVVSEGWAKV 222 V++LVVSEGWA+V Sbjct: 101 VSVLVVSEGWARV 113 >ref|XP_002322312.1| predicted protein [Populus trichocarpa] gi|222869308|gb|EEF06439.1| predicted protein [Populus trichocarpa] Length = 984 Score = 41.6 bits (96), Expect(3) = 1e-06 Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 25/64 (39%) Frame = +2 Query: 65 KKTRTVSDLVAPRL-------------------------EVIFNIDHTVPSTGREFGSIF 169 +KT T+S L+APRL EV F +D+ VPS GREFGS+F Sbjct: 40 EKTITLSSLIAPRLARRGGVDEPFAWNSREYLRKLCIGKEVTFKVDYAVPSIGREFGSVF 99 Query: 170 L*DK 181 L +K Sbjct: 100 LGEK 103 Score = 28.1 bits (61), Expect(3) = 1e-06 Identities = 12/13 (92%), Positives = 13/13 (100%) Frame = +1 Query: 184 VAMLVVSEGWAKV 222 VA+LVVSEGWAKV Sbjct: 105 VALLVVSEGWAKV 117 Score = 26.6 bits (57), Expect(3) = 1e-06 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +1 Query: 1 KTVPSGDTLVIMGVSKSE 54 K VPSGD+LVIM ++ S+ Sbjct: 17 KAVPSGDSLVIMAMTSSK 34 >gb|ACN40579.1| unknown [Picea sitchensis] Length = 988 Score = 43.1 bits (100), Expect(2) = 1e-06 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 25/64 (39%) Frame = +2 Query: 65 KKTRTVSDLVAPRL-------------------------EVIFNIDHTVPSTGREFGSIF 169 +KT T+S L+AP+L EV F +D+TVPS GREFGS+F Sbjct: 37 EKTITLSSLMAPKLARRGGIDEPFAWESREFLRKLCIGKEVTFRVDYTVPSIGREFGSVF 96 Query: 170 L*DK 181 L DK Sbjct: 97 LGDK 100 Score = 33.9 bits (76), Expect(2) = 1e-06 Identities = 15/23 (65%), Positives = 19/23 (82%) Frame = +1 Query: 1 KTVPSGDTLVIMGVSKSEFLPEK 69 K VPSGD+LVI+G +K+E PEK Sbjct: 16 KAVPSGDSLVIIGSAKTELPPEK 38 >emb|CAL38976.1| TUDOR protein with multiple SNc domains [Picea abies] Length = 988 Score = 43.1 bits (100), Expect(2) = 1e-06 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 25/64 (39%) Frame = +2 Query: 65 KKTRTVSDLVAPRL-------------------------EVIFNIDHTVPSTGREFGSIF 169 +KT T+S L+AP+L EV F +D+TVPS GREFGS+F Sbjct: 37 EKTITLSSLMAPKLARRGGIDEPFAWESREFLRKLCIGKEVTFRVDYTVPSIGREFGSVF 96 Query: 170 L*DK 181 L DK Sbjct: 97 LGDK 100 Score = 33.9 bits (76), Expect(2) = 1e-06 Identities = 15/23 (65%), Positives = 19/23 (82%) Frame = +1 Query: 1 KTVPSGDTLVIMGVSKSEFLPEK 69 K VPSGD+LVI+G +K+E PEK Sbjct: 16 KAVPSGDSLVIIGSAKTELPPEK 38