BLASTX nr result

ID: Dioscorea21_contig00007206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007206
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273150.1| PREDICTED: staphylococcal nuclease domain-co...    44   7e-08
emb|CAN83456.1| hypothetical protein VITISV_034601 [Vitis vinifera]    44   7e-08
ref|XP_002322312.1| predicted protein [Populus trichocarpa] gi|2...    42   1e-06
gb|ACN40579.1| unknown [Picea sitchensis]                              43   1e-06
emb|CAL38976.1| TUDOR protein with multiple SNc domains [Picea a...    43   1e-06

>ref|XP_002273150.1| PREDICTED: staphylococcal nuclease domain-containing protein 1
           [Vitis vinifera] gi|296088151|emb|CBI35621.3| unnamed
           protein product [Vitis vinifera]
          Length = 1000

 Score = 43.9 bits (102), Expect(3) = 7e-08
 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 25/64 (39%)
 Frame = +2

Query: 65  KKTRTVSDLVAPRL-------------------------EVIFNIDHTVPSTGREFGSIF 169
           ++T T+S L+APRL                         EV F +D+TVPS GREFGS+F
Sbjct: 43  ERTITLSSLIAPRLARRGGVDEPFAWDSREYLRKLCIGKEVTFRVDYTVPSIGREFGSVF 102

Query: 170 L*DK 181
           L DK
Sbjct: 103 LGDK 106



 Score = 31.2 bits (69), Expect(3) = 7e-08
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +1

Query: 1  KTVPSGDTLVIMGVSKSEFLPEKNT 75
          K VPSGD LVIMG SK +  P + T
Sbjct: 21 KAVPSGDCLVIMGNSKGDSPPPERT 45



 Score = 25.4 bits (54), Expect(3) = 7e-08
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = +1

Query: 184 VAMLVVSEGWAKV 222
           V++LVVSEGWA+V
Sbjct: 108 VSVLVVSEGWARV 120


>emb|CAN83456.1| hypothetical protein VITISV_034601 [Vitis vinifera]
          Length = 983

 Score = 43.9 bits (102), Expect(3) = 7e-08
 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 25/64 (39%)
 Frame = +2

Query: 65  KKTRTVSDLVAPRL-------------------------EVIFNIDHTVPSTGREFGSIF 169
           ++T T+S L+APRL                         EV F +D+TVPS GREFGS+F
Sbjct: 36  ERTITLSSLIAPRLARRGGVDEPFAWDSREYLRKLCIGKEVTFRVDYTVPSIGREFGSVF 95

Query: 170 L*DK 181
           L DK
Sbjct: 96  LGDK 99



 Score = 31.2 bits (69), Expect(3) = 7e-08
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +1

Query: 1  KTVPSGDTLVIMGVSKSEFLPEKNT 75
          K VPSGD LVIMG SK +  P + T
Sbjct: 14 KAVPSGDCLVIMGNSKGDSPPPERT 38



 Score = 25.4 bits (54), Expect(3) = 7e-08
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = +1

Query: 184 VAMLVVSEGWAKV 222
           V++LVVSEGWA+V
Sbjct: 101 VSVLVVSEGWARV 113


>ref|XP_002322312.1| predicted protein [Populus trichocarpa] gi|222869308|gb|EEF06439.1|
           predicted protein [Populus trichocarpa]
          Length = 984

 Score = 41.6 bits (96), Expect(3) = 1e-06
 Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 25/64 (39%)
 Frame = +2

Query: 65  KKTRTVSDLVAPRL-------------------------EVIFNIDHTVPSTGREFGSIF 169
           +KT T+S L+APRL                         EV F +D+ VPS GREFGS+F
Sbjct: 40  EKTITLSSLIAPRLARRGGVDEPFAWNSREYLRKLCIGKEVTFKVDYAVPSIGREFGSVF 99

Query: 170 L*DK 181
           L +K
Sbjct: 100 LGEK 103



 Score = 28.1 bits (61), Expect(3) = 1e-06
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = +1

Query: 184 VAMLVVSEGWAKV 222
           VA+LVVSEGWAKV
Sbjct: 105 VALLVVSEGWAKV 117



 Score = 26.6 bits (57), Expect(3) = 1e-06
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 1  KTVPSGDTLVIMGVSKSE 54
          K VPSGD+LVIM ++ S+
Sbjct: 17 KAVPSGDSLVIMAMTSSK 34


>gb|ACN40579.1| unknown [Picea sitchensis]
          Length = 988

 Score = 43.1 bits (100), Expect(2) = 1e-06
 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 25/64 (39%)
 Frame = +2

Query: 65  KKTRTVSDLVAPRL-------------------------EVIFNIDHTVPSTGREFGSIF 169
           +KT T+S L+AP+L                         EV F +D+TVPS GREFGS+F
Sbjct: 37  EKTITLSSLMAPKLARRGGIDEPFAWESREFLRKLCIGKEVTFRVDYTVPSIGREFGSVF 96

Query: 170 L*DK 181
           L DK
Sbjct: 97  LGDK 100



 Score = 33.9 bits (76), Expect(2) = 1e-06
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = +1

Query: 1  KTVPSGDTLVIMGVSKSEFLPEK 69
          K VPSGD+LVI+G +K+E  PEK
Sbjct: 16 KAVPSGDSLVIIGSAKTELPPEK 38


>emb|CAL38976.1| TUDOR protein with multiple SNc domains [Picea abies]
          Length = 988

 Score = 43.1 bits (100), Expect(2) = 1e-06
 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 25/64 (39%)
 Frame = +2

Query: 65  KKTRTVSDLVAPRL-------------------------EVIFNIDHTVPSTGREFGSIF 169
           +KT T+S L+AP+L                         EV F +D+TVPS GREFGS+F
Sbjct: 37  EKTITLSSLMAPKLARRGGIDEPFAWESREFLRKLCIGKEVTFRVDYTVPSIGREFGSVF 96

Query: 170 L*DK 181
           L DK
Sbjct: 97  LGDK 100



 Score = 33.9 bits (76), Expect(2) = 1e-06
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = +1

Query: 1  KTVPSGDTLVIMGVSKSEFLPEK 69
          K VPSGD+LVI+G +K+E  PEK
Sbjct: 16 KAVPSGDSLVIIGSAKTELPPEK 38


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