BLASTX nr result

ID: Dioscorea21_contig00007199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007199
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30135.3| unnamed protein product [Vitis vinifera]              134   2e-29
gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]      130   3e-28
gb|AFW79512.1| DNA-binding protein [Zea mays]                         127   2e-27
ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
ref|NP_001147602.1| DNA-binding protein [Zea mays] gi|195612448|...   127   2e-27

>emb|CBI30135.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  134 bits (337), Expect = 2e-29
 Identities = 88/242 (36%), Positives = 126/242 (52%), Gaps = 10/242 (4%)
 Frame = +3

Query: 111 MLAIRRAANPLRSHFYRIVVTHACCGNPGV---------PISKS-ECVNGLSVVLKPFSH 260
           M A+RR++N L++  + I    AC     +          I KS + +N   +  + F H
Sbjct: 1   MWALRRSSNRLKNQGFSIGTLQACHAKSEMLSTYYKDMTGICKSPQVINDCHLSSRKFYH 60

Query: 261 GSSFRLMMSSWESRNLSSHAGTKSSDSENDLEDGFSDLDTPPSTDRIEDIGHKEDDCDLV 440
            +    + S   S + SS AG KSS  E+DLEDGFS+L+   +    +D   + +  D +
Sbjct: 61  PTDIYSVFSMG-SCSFSSQAGAKSSGEEDDLEDGFSELEASGNAGGFQDSDAESEHEDEL 119

Query: 441 XXXXXXXXXXXXXXXNLVGLSGTDTDXXXXXXXXXXXXSPLFKIIMDASHSSVNSALDKW 620
                          N +    TDTD            S LFK IM AS   ++S L+KW
Sbjct: 120 LSDPKSDDDEIESTQNELEPLDTDTDVSEKRSPRKRVSSELFKAIMAASDQPIHSVLNKW 179

Query: 621 VEEGNALGRGEIAVVMLNLRKRRLYVKALEFVTWLKANKRLEFAERDYASYLDLIAKVRG 800
            +EG  + R EIA  MLNLRK R+++KAL+F  W++ +K+L+  ERDYAS +DLIAKVRG
Sbjct: 180 DQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVERDYASRVDLIAKVRG 239

Query: 801 LQ 806
           LQ
Sbjct: 240 LQ 241


>gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
          Length = 612

 Score =  130 bits (327), Expect = 3e-28
 Identities = 87/248 (35%), Positives = 122/248 (49%), Gaps = 17/248 (6%)
 Frame = +3

Query: 111 MLAIRRAANPLRSHFYRIVVTHACCG--------------NPGVPISKSECVNGLSVVLK 248
           M A+RRAANPLR    ++    +C                +      KS C +      K
Sbjct: 1   MWALRRAANPLRVSARQVASVRSCASLDVLLSADAKNAEQHSEQGCQKSCCCS----TPK 56

Query: 249 PFSHGSSFRLMMSSWESRNLSSHAGTKSSDSENDLEDGFSDLDTPPSTDR--IEDIGHKE 422
           P +    F    S+W SR+ SS  G  S D  +DLEDGFSDL+ PP  D+  +E    + 
Sbjct: 57  PPACRLPFSSGWSTW-SRSFSSQTGANSGDKVDDLEDGFSDLEVPPEADKKDVELPSEES 115

Query: 423 DDCDLVXXXXXXXXXXXXXXXNLVGLSGTDTD-XXXXXXXXXXXXSPLFKIIMDASHSSV 599
            D D V                 +GLSG D D             SPL K++++A  + V
Sbjct: 116 SDDDAVDG---------------IGLSGDDADAKPDKEPMKKASQSPLLKVMLEAPRNGV 160

Query: 600 NSALDKWVEEGNALGRGEIAVVMLNLRKRRLYVKALEFVTWLKANKRLEFAERDYASYLD 779
           +  L KW++ GN   R +I  V++NLRKR+ Y KAL+ + WL+ +K ++  ERDYAS LD
Sbjct: 161 SGTLKKWLDGGNTFDRSDIFYVIMNLRKRKFYFKALQLLEWLEDSKVIDLGERDYASRLD 220

Query: 780 LIAKVRGL 803
           L+AKV G+
Sbjct: 221 LVAKVHGV 228


>gb|AFW79512.1| DNA-binding protein [Zea mays]
          Length = 622

 Score =  127 bits (320), Expect = 2e-27
 Identities = 89/252 (35%), Positives = 121/252 (48%), Gaps = 21/252 (8%)
 Frame = +3

Query: 111 MLAIRRAANPLRSHFYRIVVTHACCGNPGVPISKSECVNG--------LSVVLKPFSHGS 266
           M A+RRA NPLR    ++   H C     +  + ++ V          +    KP S   
Sbjct: 1   MWALRRAGNPLRFRAQKVASAHVCASLEVLLAADAKNVEEHHEADCQKMCCCHKPRS--P 58

Query: 267 SFRLMMSSWE---SRNLSSHAGTKSSDSENDLEDGFSDLDTPPSTDRIEDIGHKEDDCDL 437
           +F+L  SS +   SR  SS  G  S D  ++LEDGFSDL+ PP+  + +D    ED  D 
Sbjct: 59  AFQLSFSSGQFACSRGFSSQPGANSGDKADELEDGFSDLEVPPAAVQNDDGLASEDSSD- 117

Query: 438 VXXXXXXXXXXXXXXXNLVGLSGTDTDXXXXXXXXXXXX----------SPLFKIIMDAS 587
                           +  GL   D D                      S L K +++A 
Sbjct: 118 ------------EDAADEFGLPDVDADAKPEKEHTRRLSDSILLKTLSDSILLKTVLEAP 165

Query: 588 HSSVNSALDKWVEEGNALGRGEIAVVMLNLRKRRLYVKALEFVTWLKANKRLEFAERDYA 767
              V SAL+KW ++GNA  RGE+  V+LNLRKR  Y KALE V W++ ++  EF ERDYA
Sbjct: 166 RHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVERDYA 225

Query: 768 SYLDLIAKVRGL 803
           ++LDL AKV GL
Sbjct: 226 AHLDLTAKVYGL 237


>ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Vitis vinifera]
          Length = 587

 Score =  127 bits (320), Expect = 2e-27
 Identities = 76/197 (38%), Positives = 107/197 (54%)
 Frame = +3

Query: 216 ECVNGLSVVLKPFSHGSSFRLMMSSWESRNLSSHAGTKSSDSENDLEDGFSDLDTPPSTD 395
           + +N   +  + F H +    + S   S + SS AG KSS  E+DLEDGFS+L+   +  
Sbjct: 9   QVINDCHLSSRKFYHPTDIYSVFSMG-SCSFSSQAGAKSSGEEDDLEDGFSELEASGNAG 67

Query: 396 RIEDIGHKEDDCDLVXXXXXXXXXXXXXXXNLVGLSGTDTDXXXXXXXXXXXXSPLFKII 575
             +D   + +  D +               N +    TDTD            S LFK I
Sbjct: 68  GFQDSDAESEHEDELLSDPKSDDDEIESTQNELEPLDTDTDVSEKRSPRKRVSSELFKAI 127

Query: 576 MDASHSSVNSALDKWVEEGNALGRGEIAVVMLNLRKRRLYVKALEFVTWLKANKRLEFAE 755
           M AS   ++S L+KW +EG  + R EIA  MLNLRK R+++KAL+F  W++ +K+L+  E
Sbjct: 128 MAASDQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVE 187

Query: 756 RDYASYLDLIAKVRGLQ 806
           RDYAS +DLIAKVRGLQ
Sbjct: 188 RDYASRVDLIAKVRGLQ 204


>ref|NP_001147602.1| DNA-binding protein [Zea mays] gi|195612448|gb|ACG28054.1|
           DNA-binding protein [Zea mays]
          Length = 622

 Score =  127 bits (320), Expect = 2e-27
 Identities = 89/252 (35%), Positives = 121/252 (48%), Gaps = 21/252 (8%)
 Frame = +3

Query: 111 MLAIRRAANPLRSHFYRIVVTHACCGNPGVPISKSECVNG--------LSVVLKPFSHGS 266
           M A+RRA NPLR    ++   H C     +  + ++ V          +    KP S   
Sbjct: 1   MWALRRAGNPLRFRAQKVASAHVCASLEVLLAADAKNVEEHHEADCQKMCCCHKPRS--P 58

Query: 267 SFRLMMSSWE---SRNLSSHAGTKSSDSENDLEDGFSDLDTPPSTDRIEDIGHKEDDCDL 437
           +F+L  SS +   SR  SS  G  S D  ++LEDGFSDL+ PP+  + +D    ED  D 
Sbjct: 59  AFQLSFSSGQFACSRGFSSQPGANSGDKADELEDGFSDLEVPPAAVQNDDGLASEDSSD- 117

Query: 438 VXXXXXXXXXXXXXXXNLVGLSGTDTDXXXXXXXXXXXX----------SPLFKIIMDAS 587
                           +  GL   D D                      S L K +++A 
Sbjct: 118 ------------EDAADEFGLPDVDADAKPEKEHTRRLSDSILLKTLSDSILLKTVLEAP 165

Query: 588 HSSVNSALDKWVEEGNALGRGEIAVVMLNLRKRRLYVKALEFVTWLKANKRLEFAERDYA 767
              V SAL+KW ++GNA  RGE+  V+LNLRKR  Y KALE V W++ ++  EF ERDYA
Sbjct: 166 RHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVERDYA 225

Query: 768 SYLDLIAKVRGL 803
           ++LDL AKV GL
Sbjct: 226 AHLDLTAKVYGL 237


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