BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007145
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...    78   8e-13
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...    65   6e-09
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002885793.1| zinc finger (CCCH-type) family protein [Arab...    57   2e-06
emb|CBI28414.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
           gi|223525472|gb|EEF28048.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 578

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
 Frame = -2

Query: 268 SPPFNDMFGDDMGLHDQAEFFGSEEKFNSLHRMSPEFSGNYLFQDAAR--RTGLRSPPA- 98
           SP ++D   +D  L +  +F   +++F   H ++ +FS NY + + A   RT  RSP   
Sbjct: 132 SPGYSDTVPEDYRLQNHMQFLTLDDQFEFAHSVNSDFSSNYFYSEPALGPRTNRRSPSLP 191

Query: 97  ------CNYFYRGYCRHGINCRYYHGHAGPDNFSLMYA 2
                 C+YF +GYC+HG NCRY HGH  P+ FS +++
Sbjct: 192 EFPLKICHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFS 229


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Vitis vinifera]
          Length = 572

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
 Frame = -2

Query: 259 FNDMFGDDMGLHDQAEFFGSEEKFNSLHRMSPEFSGNYLFQDAARRTGL--RSPP----- 101
           ++D   DD  L  Q  F   E++  +   +  EFSG+Y + + A  T +  RSP      
Sbjct: 133 YSDSLPDDFRLQSQIHFLAMEDQLEN--SVGSEFSGSYYYAEQALNTRISRRSPSLPEFP 190

Query: 100 --ACNYFYRGYCRHGINCRYYHGHAGPDNFSLMYA 2
              C+YF +G+C+HG +CRY+HGH   ++FS +++
Sbjct: 191 LKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFS 225


>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
 Frame = -2

Query: 238 DMGLHDQAEFFGSEEKFNSLHRMSPEFSGNYLFQDAAR--RTGLRSPPA-------CNYF 86
           D  L +Q +F  S+++   L  ++ +FS +Y + + A   RT  RSP         C+YF
Sbjct: 119 DYRLQNQMQFLTSDDQ---LEFVNSDFSSSYFYPEPALGPRTSRRSPSLPEFPVKICHYF 175

Query: 85  YRGYCRHGINCRYYHGHAGPDNFS 14
            +G+C+HG NCRY+HGH  P++FS
Sbjct: 176 NKGFCKHGNNCRYFHGHPMPESFS 199


>ref|XP_002885793.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297331633|gb|EFH62052.1| zinc finger
           (CCCH-type) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 525

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
 Frame = -2

Query: 268 SPPFNDMFGDDMG----LHDQAEFFGSEEKFNSLHRMSPEFSGNYLFQDAA---RRTGLR 110
           SPP    F ++      L +  +F   E+   S     PEFS  +  QD      RT  R
Sbjct: 96  SPPVKTGFWENSTEMDTLQNNLQFLNFEDSLTS-----PEFSNGFFSQDRQCLPLRTSRR 150

Query: 109 SPPA-------CNYFYRGYCRHGINCRYYHGHAGP--DNFSLMY 5
           SP         C+YF +G+C+HG NCRY+HG   P  ++F+LM+
Sbjct: 151 SPSLPEFPVKICHYFNKGFCKHGNNCRYFHGQIIPERESFALMF 194


>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
 Frame = -2

Query: 220 QAEFFGSEEKFNSLHRMSPEFSGNYLFQDAARRTGL--RSPP-------ACNYFYRGYCR 68
           Q  F   E++  +   +  EFSG+Y + + A  T +  RSP         C+YF +G+C+
Sbjct: 99  QIHFLAMEDQLEN--SVGSEFSGSYYYAEQALNTRISRRSPSLPEFPLKVCHYFNKGFCK 156

Query: 67  HGINCRYYHGHAGPDNFSLMYA 2
           HG +CRY+HGH   ++FS +++
Sbjct: 157 HGNSCRYFHGHPMLESFSQIFS 178