BLASTX nr result

ID: Dioscorea21_contig00007120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007120
         (1291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [V...   603   e-170
ref|XP_004160536.1| PREDICTED: peptide chain release factor 1-li...   594   e-167
ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-li...   593   e-167
ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-li...   588   e-166
ref|XP_002321029.1| predicted protein [Populus trichocarpa] gi|2...   584   e-164

>ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
            gi|296086617|emb|CBI32252.3| unnamed protein product
            [Vitis vinifera]
          Length = 411

 Score =  603 bits (1555), Expect = e-170
 Identities = 319/418 (76%), Positives = 342/418 (81%)
 Frame = -1

Query: 1255 MESLLSSFMARTMAISPIPGALRANLFNPRERTMSRPLTRAPLPKTKQSSIVCMAEPYLI 1076
            M SL +SF AR  A +      R   F      + RP      P+     IVCMAEPYLI
Sbjct: 1    MNSLTTSFAARFPARAEQVFCNRVRSF-----ALFRPSRTHRTPR-----IVCMAEPYLI 50

Query: 1075 SKLDSAEKTWKELSVKLADPDVVSNPTEYQKIAQSMAELDEVVSNYRKFKDCERQLEETK 896
            +KL+SAEKTWKELSVKLADPD+VSNP+EYQK+AQSMAELDEVVS +++FKDCE+QLEE K
Sbjct: 51   TKLESAEKTWKELSVKLADPDIVSNPSEYQKLAQSMAELDEVVSTFKRFKDCEKQLEEAK 110

Query: 895  ALAKENGTDPEMQEMIAYEIETXXXXXXXXXXXXXXXXLPSDPLDSRNILLEVRAGTGGD 716
            ALAKE+G D +M EMIAYEI T                LPSDPLDSRNILLEVRAGTGGD
Sbjct: 111  ALAKEDGIDADMAEMIAYEIGTLTNQLKELEENIKVLLLPSDPLDSRNILLEVRAGTGGD 170

Query: 715  EAGIWAGDLVRMYQKYSELNSWKYTPVSSSEAEKGGYKTYVMEIKGKRVYSKLKYESGVH 536
            EAGIWAGDLVRMYQKYSE NSWKY PVSSSEAEKGG+KTYV+E+KG  VYSKLKYESGVH
Sbjct: 171  EAGIWAGDLVRMYQKYSERNSWKYAPVSSSEAEKGGFKTYVLEVKGNCVYSKLKYESGVH 230

Query: 535  RVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKEIELTTARSGGAGGQNVNKVETA 356
            RVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPK+IELTTARSGGAGGQNVNKVETA
Sbjct: 231  RVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETA 290

Query: 355  VDLFHKPTGIRIFCTEERTQLQNRIRALQLLRAKLYEIKVREQQESIRNQRKSQVGTGAR 176
            VDLFHKPTGIRIFCTEERTQLQNR RALQLLRAKLYEIKVREQQE IRNQRKSQVGTGAR
Sbjct: 291  VDLFHKPTGIRIFCTEERTQLQNRSRALQLLRAKLYEIKVREQQELIRNQRKSQVGTGAR 350

Query: 175  SEKIRTYNYKDNRVTDHRLKMNFELTSFLSGVIETAVQACIXXXXXXXXXXXXESVST 2
            +EKIRTYNYKDNRVTDHRLKMNFELTSFL G IETAVQ+C+             SV+T
Sbjct: 351  AEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIETAVQSCVAMEQKELLEELAHSVAT 408


>ref|XP_004160536.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
          Length = 416

 Score =  594 bits (1531), Expect = e-167
 Identities = 296/358 (82%), Positives = 323/358 (90%)
 Frame = -1

Query: 1126 PKTKQSSIVCMAEPYLISKLDSAEKTWKELSVKLADPDVVSNPTEYQKIAQSMAELDEVV 947
            P  + S+++CMAEPYLI KL+SAEKTWKELSVKLADPD+VSNPTEYQK+AQSM+ELDEVV
Sbjct: 39   PPFRASTLICMAEPYLIVKLESAEKTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVV 98

Query: 946  SNYRKFKDCERQLEETKALAKENGTDPEMQEMIAYEIETXXXXXXXXXXXXXXXXLPSDP 767
            S +RKFK+CE+QLEE KAL+KE+G D +M EMIA EI +                LPSDP
Sbjct: 99   STFRKFKECEKQLEEAKALSKESGNDEDMVEMIALEISSLSSELKDIEEKLKVMLLPSDP 158

Query: 766  LDSRNILLEVRAGTGGDEAGIWAGDLVRMYQKYSELNSWKYTPVSSSEAEKGGYKTYVME 587
            LD+RNI+LEVRAGTGGDEAGIWAGDLVRMYQKYSE NSWK++PVSSSEAEKGGYKTYV+E
Sbjct: 159  LDARNIMLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPVSSSEAEKGGYKTYVLE 218

Query: 586  IKGKRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKEIELTT 407
            IKG+RVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPK+IELTT
Sbjct: 219  IKGQRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTT 278

Query: 406  ARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERTQLQNRIRALQLLRAKLYEIKVREQ 227
            ARSGGAGGQNVNKVETA+DLFHKPTGIRIFCTEERTQLQN++RA QLLRAKLYEIKVREQ
Sbjct: 279  ARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKLRAFQLLRAKLYEIKVREQ 338

Query: 226  QESIRNQRKSQVGTGARSEKIRTYNYKDNRVTDHRLKMNFELTSFLSGVIETAVQACI 53
            QE IRNQRK QVGTGAR+EKIRTYNYKDNRVTDHRLK NFELTSFL G IE AVQAC+
Sbjct: 339  QEKIRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKTNFELTSFLEGDIEDAVQACV 396


>ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 429

 Score =  593 bits (1528), Expect = e-167
 Identities = 312/413 (75%), Positives = 346/413 (83%), Gaps = 1/413 (0%)
 Frame = -1

Query: 1288 TSSLSLLSQIAMESLLSSFMARTMAISPIPGALRANLFNP-RERTMSRPLTRAPLPKTKQ 1112
            ++SLS  S +AM SL +SF AR  A        R +L  P R R++    TR    K   
Sbjct: 5    SASLSGYS-VAMNSLTASFTARICAT-------RRDLLLPIRHRSLHPFTTRRVATKLTP 56

Query: 1111 SSIVCMAEPYLISKLDSAEKTWKELSVKLADPDVVSNPTEYQKIAQSMAELDEVVSNYRK 932
              IVCMAEPYLI+KL+SAEKTWKELSVKLADPDVVS+P EYQK+AQS++ELDEVVS YR+
Sbjct: 57   PRIVCMAEPYLITKLESAEKTWKELSVKLADPDVVSDPKEYQKLAQSVSELDEVVSTYRR 116

Query: 931  FKDCERQLEETKALAKENGTDPEMQEMIAYEIETXXXXXXXXXXXXXXXXLPSDPLDSRN 752
            FKDCE+ LEETKALAK++G D +M EMI++EI+T                LPSDP+D+RN
Sbjct: 117  FKDCEKVLEETKALAKDDGNDEDMVEMISFEIDTLSKQLAELEEKIKVLLLPSDPMDARN 176

Query: 751  ILLEVRAGTGGDEAGIWAGDLVRMYQKYSELNSWKYTPVSSSEAEKGGYKTYVMEIKGKR 572
            ILLEVRAGTGGDEAGIWAGDLVRMY++YSE NSWKY+ VSSS AEKGGYKTYVMEIKG R
Sbjct: 177  ILLEVRAGTGGDEAGIWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNR 236

Query: 571  VYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKEIELTTARSGG 392
            VYSKLKYESGVHRVQRVP TETQGRVHTSTATVAIMPEADEVEVVIDPK+IELTTARSGG
Sbjct: 237  VYSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGG 296

Query: 391  AGGQNVNKVETAVDLFHKPTGIRIFCTEERTQLQNRIRALQLLRAKLYEIKVREQQESIR 212
            AGGQNVNKVETA+DLFHKPTGIRIFCTEERTQL+NR RA QLLRAKLYEIKVREQQES+R
Sbjct: 297  AGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLKNRNRAFQLLRAKLYEIKVREQQESLR 356

Query: 211  NQRKSQVGTGARSEKIRTYNYKDNRVTDHRLKMNFELTSFLSGVIETAVQACI 53
            NQRK QVGTGARSEKIRTYNYKDNRVTDHRLK+N+ELTSFL G IE AVQ+C+
Sbjct: 357  NQRKLQVGTGARSEKIRTYNYKDNRVTDHRLKINYELTSFLDGDIEDAVQSCV 409


>ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 428

 Score =  588 bits (1517), Expect = e-166
 Identities = 305/412 (74%), Positives = 345/412 (83%)
 Frame = -1

Query: 1288 TSSLSLLSQIAMESLLSSFMARTMAISPIPGALRANLFNPRERTMSRPLTRAPLPKTKQS 1109
            ++SLS  S +AM SL +SF AR  A        R +L + R R+     TR    K    
Sbjct: 5    SASLSGYS-VAMNSLTASFTARICAT-------RRDLLHIRHRSFHPLTTRRVATKLTPP 56

Query: 1108 SIVCMAEPYLISKLDSAEKTWKELSVKLADPDVVSNPTEYQKIAQSMAELDEVVSNYRKF 929
             IVCMAEPYLI+KL+SAEKTW+ELSVKLADPDVVS+P EYQK+AQS+AELDEVVS YR+F
Sbjct: 57   RIVCMAEPYLITKLESAEKTWQELSVKLADPDVVSDPKEYQKLAQSVAELDEVVSTYRRF 116

Query: 928  KDCERQLEETKALAKENGTDPEMQEMIAYEIETXXXXXXXXXXXXXXXXLPSDPLDSRNI 749
            KDCE+ LEETKALAK++G D +M EMI++EI++                LPSDP+D++NI
Sbjct: 117  KDCEKVLEETKALAKDDGNDEDMVEMISFEIDSLSKQLAELEEKLKVLLLPSDPMDAKNI 176

Query: 748  LLEVRAGTGGDEAGIWAGDLVRMYQKYSELNSWKYTPVSSSEAEKGGYKTYVMEIKGKRV 569
            LLEVRAGTGGDEAGIWAGDLVRMY++YSE NSWKY+ VSSS AEKGGYKTYVMEIKG RV
Sbjct: 177  LLEVRAGTGGDEAGIWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRV 236

Query: 568  YSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKEIELTTARSGGA 389
            YSKLKYESGVHRVQRVP TETQGRVHTSTATVAIMPEADEVEV+IDPK+IELTTARSGGA
Sbjct: 237  YSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMPEADEVEVIIDPKDIELTTARSGGA 296

Query: 388  GGQNVNKVETAVDLFHKPTGIRIFCTEERTQLQNRIRALQLLRAKLYEIKVREQQESIRN 209
            GGQNVNKVETA+DLFHKPTGIRIFCTEERTQL+N+ RA QLLRAKLYE+K+REQQES+RN
Sbjct: 297  GGQNVNKVETAIDLFHKPTGIRIFCTEERTQLKNKNRAFQLLRAKLYEMKIREQQESLRN 356

Query: 208  QRKSQVGTGARSEKIRTYNYKDNRVTDHRLKMNFELTSFLSGVIETAVQACI 53
            QRK QVGTGARSEKIRTYNYKDNRVTDHRLK+N+ELTSFL G IE AVQ+C+
Sbjct: 357  QRKLQVGTGARSEKIRTYNYKDNRVTDHRLKINYELTSFLDGDIEDAVQSCV 408


>ref|XP_002321029.1| predicted protein [Populus trichocarpa] gi|222861802|gb|EEE99344.1|
            predicted protein [Populus trichocarpa]
          Length = 416

 Score =  584 bits (1505), Expect = e-164
 Identities = 295/361 (81%), Positives = 320/361 (88%)
 Frame = -1

Query: 1138 RAPLPKTKQSSIVCMAEPYLISKLDSAEKTWKELSVKLADPDVVSNPTEYQKIAQSMAEL 959
            R  L ++    IVCMAEPYLI+KL+SAEKTWKELSVKL DPDVVSNP+EYQK+AQS+AEL
Sbjct: 35   RPTLSRSTTPRIVCMAEPYLITKLESAEKTWKELSVKLGDPDVVSNPSEYQKLAQSVAEL 94

Query: 958  DEVVSNYRKFKDCERQLEETKALAKENGTDPEMQEMIAYEIETXXXXXXXXXXXXXXXXL 779
            DEVVS +++FKDCE+ LE+T+ALAKE+G D +M EMIAYEIE+                L
Sbjct: 95   DEVVSIFKRFKDCEKMLEDTRALAKEDGNDEDMAEMIAYEIESLSSELKQLEEKLTVLLL 154

Query: 778  PSDPLDSRNILLEVRAGTGGDEAGIWAGDLVRMYQKYSELNSWKYTPVSSSEAEKGGYKT 599
            PSDPLD+RNILLEVRAGTGGDEAG+WAGDLVRMYQ+YSE NSWK + +SSSEAEKGGYKT
Sbjct: 155  PSDPLDARNILLEVRAGTGGDEAGLWAGDLVRMYQRYSEQNSWKVSVISSSEAEKGGYKT 214

Query: 598  YVMEIKGKRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKEI 419
            YVME+KGK VYSKLKYESGVHRVQRVPQTE QGRVHTSTATVAIMPE DEVEVVIDPKE 
Sbjct: 215  YVMEVKGKSVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEVDEVEVVIDPKEY 274

Query: 418  ELTTARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERTQLQNRIRALQLLRAKLYEIK 239
            ELTTARSGGAGGQNVNKVETAVDL HKPTGIRIFCTEERTQLQNR RALQLLRAKLYEIK
Sbjct: 275  ELTTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTEERTQLQNRNRALQLLRAKLYEIK 334

Query: 238  VREQQESIRNQRKSQVGTGARSEKIRTYNYKDNRVTDHRLKMNFELTSFLSGVIETAVQA 59
            VREQQESIRNQRK QVGTGAR+EKIRTYNYKDNRVTDHRLK+NFELTSFL+G IE AVQA
Sbjct: 335  VREQQESIRNQRKMQVGTGARAEKIRTYNYKDNRVTDHRLKVNFELTSFLAGDIENAVQA 394

Query: 58   C 56
            C
Sbjct: 395  C 395


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