BLASTX nr result

ID: Dioscorea21_contig00007119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007119
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160720.1| PREDICTED: zinc finger CCCH domain-containin...   309   3e-82
ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containin...   308   6e-82
emb|CAN64331.1| hypothetical protein VITISV_014667 [Vitis vinifera]   308   6e-82
ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containin...   307   1e-81
ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|2...   306   2e-81

>ref|XP_004160720.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like
           [Cucumis sativus]
          Length = 300

 Score =  309 bits (792), Expect = 3e-82
 Identities = 150/207 (72%), Positives = 172/207 (83%), Gaps = 7/207 (3%)
 Frame = +1

Query: 1   DDHGSEDQQQQPQSMLKTKK-PLRDNKLYFSSSNADGASDKDSS------LFRFESSNEI 159
           D+   ED + +   +L  KK P  ++KLYFSS  +  +S  +S+      +F+FESS EI
Sbjct: 32  DEDEEEDSKAETSFLLNQKKAPKTESKLYFSSGPSKNSSSNESNVEPNKPIFQFESSKEI 91

Query: 160 QVHHDSRATATLETETDFSRDARAIRERVLKQADEALKGKSKGKGDEKVYKGIHGYTDYK 339
           QVHHDSRATATLETETDFSRDARAIRERVLKQA+EALKGK KG G EK+YKG++ Y DYK
Sbjct: 92  QVHHDSRATATLETETDFSRDARAIRERVLKQAEEALKGKGKGSGGEKLYKGVNAYVDYK 151

Query: 340 AGFRREQTVAGEKAGGAHGPLRASAHIRSSARFDYQPDICKDYKETGYCGFGDSCKFMHD 519
           AGFRRE T++ EKAGGAHGPLRASAHIR+SARFDYQPDICKDYKETGYCG+GD+CKFMHD
Sbjct: 152 AGFRREHTISSEKAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHD 211

Query: 520 RGDYKSGWQLEKEWEESEKARKKGLAM 600
           RGDYKSGWQLEKEWEE EKARK+ LAM
Sbjct: 212 RGDYKSGWQLEKEWEEVEKARKRKLAM 238


>ref|XP_002277034.2| PREDICTED: zinc finger CCCH domain-containing protein 1-like [Vitis
           vinifera] gi|297745423|emb|CBI40503.3| unnamed protein
           product [Vitis vinifera]
          Length = 331

 Score =  308 bits (789), Expect = 6e-82
 Identities = 153/206 (74%), Positives = 173/206 (83%), Gaps = 6/206 (2%)
 Frame = +1

Query: 1   DDHGSEDQQQQPQSMLKTKKPLR-DNKLYFSS-----SNADGASDKDSSLFRFESSNEIQ 162
           D+  +ED +     + + KKP + DNKLYFS+     S  D  + +   +F+FESS EIQ
Sbjct: 43  DEDENEDSKTGTSVLHQQKKPPKPDNKLYFSTGSSRKSTMDEPNKESEPIFQFESSKEIQ 102

Query: 163 VHHDSRATATLETETDFSRDARAIRERVLKQADEALKGKSKGKGDEKVYKGIHGYTDYKA 342
           V HDSRATATLETETDFSRDARAIRERVLKQ+ +ALKGK+K   DEK+YKGIHGYTDYKA
Sbjct: 103 VQHDSRATATLETETDFSRDARAIRERVLKQSQDALKGKNKS--DEKLYKGIHGYTDYKA 160

Query: 343 GFRREQTVAGEKAGGAHGPLRASAHIRSSARFDYQPDICKDYKETGYCGFGDSCKFMHDR 522
           GFRREQTVA EKAGGAHGPLRASAHIR+SARFDYQPDICKDYKETGYCGFGD+CKFMHDR
Sbjct: 161 GFRREQTVASEKAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGFGDACKFMHDR 220

Query: 523 GDYKSGWQLEKEWEESEKARKKGLAM 600
           GDYKSGWQ+EKEWEE+EKARK+ LAM
Sbjct: 221 GDYKSGWQMEKEWEEAEKARKRNLAM 246


>emb|CAN64331.1| hypothetical protein VITISV_014667 [Vitis vinifera]
          Length = 846

 Score =  308 bits (789), Expect = 6e-82
 Identities = 153/206 (74%), Positives = 173/206 (83%), Gaps = 6/206 (2%)
 Frame = +1

Query: 1    DDHGSEDQQQQPQSMLKTKKPLR-DNKLYFSS-----SNADGASDKDSSLFRFESSNEIQ 162
            D+  +ED +     + + KKP + DNKLYFS+     S  D  + +   +F+FESS EIQ
Sbjct: 480  DEDENEDSKTGTSVLHQQKKPPKPDNKLYFSTGSSRKSTMDEPNKESEPIFQFESSKEIQ 539

Query: 163  VHHDSRATATLETETDFSRDARAIRERVLKQADEALKGKSKGKGDEKVYKGIHGYTDYKA 342
            V HDSRATATLETETDFSRDARAIRERVLKQ+ +ALKGK+K   DEK+YKGIHGYTDYKA
Sbjct: 540  VQHDSRATATLETETDFSRDARAIRERVLKQSQDALKGKNKS--DEKLYKGIHGYTDYKA 597

Query: 343  GFRREQTVAGEKAGGAHGPLRASAHIRSSARFDYQPDICKDYKETGYCGFGDSCKFMHDR 522
            GFRREQTVA EKAGGAHGPLRASAHIR+SARFDYQPDICKDYKETGYCGFGD+CKFMHDR
Sbjct: 598  GFRREQTVASEKAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGFGDACKFMHDR 657

Query: 523  GDYKSGWQLEKEWEESEKARKKGLAM 600
            GDYKSGWQ+EKEWEE+EKARK+ LAM
Sbjct: 658  GDYKSGWQMEKEWEEAEKARKRNLAM 683


>ref|XP_004149426.1| PREDICTED: zinc finger CCCH domain-containing protein 1-like
           [Cucumis sativus]
          Length = 322

 Score =  307 bits (786), Expect = 1e-81
 Identities = 149/207 (71%), Positives = 171/207 (82%), Gaps = 7/207 (3%)
 Frame = +1

Query: 1   DDHGSEDQQQQPQSMLKTKK-PLRDNKLYFSSSNADGASDKDSS------LFRFESSNEI 159
           D+   ED + +   +L  KK P  ++KLYFSS  +  +S  +S+      +F+FESS EI
Sbjct: 32  DEDEEEDSKAETSFLLNQKKAPKTESKLYFSSGPSKNSSSNESNVEPNKPIFQFESSKEI 91

Query: 160 QVHHDSRATATLETETDFSRDARAIRERVLKQADEALKGKSKGKGDEKVYKGIHGYTDYK 339
           QVHHDSRATATLETETDFSRDARAIRERVLKQA+EALKGK K  G EK+YKG++ Y DYK
Sbjct: 92  QVHHDSRATATLETETDFSRDARAIRERVLKQAEEALKGKGKSSGGEKLYKGVNAYVDYK 151

Query: 340 AGFRREQTVAGEKAGGAHGPLRASAHIRSSARFDYQPDICKDYKETGYCGFGDSCKFMHD 519
           AGFRRE T++ EKAGGAHGPLRASAHIR+SARFDYQPDICKDYKETGYCG+GD+CKFMHD
Sbjct: 152 AGFRREHTISSEKAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHD 211

Query: 520 RGDYKSGWQLEKEWEESEKARKKGLAM 600
           RGDYKSGWQLEKEWEE EKARK+ LAM
Sbjct: 212 RGDYKSGWQLEKEWEEVEKARKRKLAM 238


>ref|XP_002320858.1| predicted protein [Populus trichocarpa] gi|222861631|gb|EEE99173.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  306 bits (784), Expect = 2e-81
 Identities = 148/205 (72%), Positives = 170/205 (82%), Gaps = 5/205 (2%)
 Frame = +1

Query: 1   DDHGSEDQQQQPQSMLKTKK-PLRDNKLYFSSSNADGASDKDSS----LFRFESSNEIQV 165
           D+   ED + Q   +   KK P  DNKLYFS+     +S+ ++     LF+FESS EIQV
Sbjct: 34  DEDEDEDSKTQTSLLHSQKKAPKADNKLYFSTGPLKKSSESNAEPERLLFQFESSKEIQV 93

Query: 166 HHDSRATATLETETDFSRDARAIRERVLKQADEALKGKSKGKGDEKVYKGIHGYTDYKAG 345
            HDSRATATLETET+FS+DARAIRER LKQAD+ALKGK    GDEK+YKGIHGYTD+KAG
Sbjct: 94  QHDSRATATLETETEFSKDARAIRERALKQADDALKGKKMSSGDEKLYKGIHGYTDHKAG 153

Query: 346 FRREQTVAGEKAGGAHGPLRASAHIRSSARFDYQPDICKDYKETGYCGFGDSCKFMHDRG 525
           FRREQT++ EKAGG+HGPLRASAHIR SARFDYQPDICKDYKETGYCG+GDSCKFMHDRG
Sbjct: 154 FRREQTISSEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRG 213

Query: 526 DYKSGWQLEKEWEESEKARKKGLAM 600
           DYKSGWQ+EKEWEE+EKARK+ LA+
Sbjct: 214 DYKSGWQMEKEWEEAEKARKRNLAL 238


Top