BLASTX nr result

ID: Dioscorea21_contig00007107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007107
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [...   129   4e-28
ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [...   127   1e-27
ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [...   127   2e-27
emb|CBI40396.3| unnamed protein product [Vitis vinifera]              127   2e-27
emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]   127   2e-27

>ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2226

 Score =  129 bits (325), Expect = 4e-28
 Identities = 88/223 (39%), Positives = 117/223 (52%), Gaps = 3/223 (1%)
 Frame = +2

Query: 2    RPPIATGNGGPTMHMPQSSGSMTQGADLSQSKNTITGPSPGPGPETLQMQYFRSLQQNRA 181
            R P+  GNG P+MH  QSS +    AD     + +   +   GPE  QMQY R L  N++
Sbjct: 392  RQPVVVGNGMPSMHSQQSSANTNFSAD-----HPLNAKTSSSGPEPPQMQYMRQL--NQS 444

Query: 182  MSQAAIPSSEV-PGNSAPAHTGSSQLPPQRAGIGFTKQQLHVLKAQILAFRRLKRGERNL 358
              QA  P++E   GN A +    +Q+P  R    FTKQQLHVLKAQILAFRRLK+GE  L
Sbjct: 445  APQAGGPTNEGGSGNHAKSQGPPTQMPQHRTS--FTKQQLHVLKAQILAFRRLKKGEGTL 502

Query: 359  PQEVLQAIVPPPIDLQPQQMFGTPGMVNQERPLASGXXXXXXXXXXXXKVPVGTXXXXXX 538
            PQE+L+AIVPPP+++Q QQ     G  NQ++P  +             K P+        
Sbjct: 503  PQELLRAIVPPPLEMQVQQPNHAAGGQNQDKPAGNIVAELISPIESSAKEPLSIPSINGQ 562

Query: 539  XXXXXXXXXVEEKAVM-VTHMQGVAGS-TKEPMQIGSVGKVEQ 661
                      +EK+++   H+Q VA   +KE     S GK EQ
Sbjct: 563  SSLKQESFVRDEKSIVPAVHVQAVAPPVSKESAPTLSAGKEEQ 605


>ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2229

 Score =  127 bits (320), Expect = 1e-27
 Identities = 88/223 (39%), Positives = 118/223 (52%), Gaps = 3/223 (1%)
 Frame = +2

Query: 2    RPPIATGNGGPTMHMPQSSGSMTQGADLSQSKNTITGPSPGPGPETLQMQYFRSLQQNRA 181
            R P+  GNG P+MH  QSS +   GAD     + +   +   GPE  QMQY R L  N++
Sbjct: 394  RQPVVVGNGMPSMHSQQSSANTNLGAD-----HPLNAKTSSSGPEPPQMQYTRQL--NQS 446

Query: 182  MSQAAIPSSEVP-GNSAPAHTGSSQLPPQRAGIGFTKQQLHVLKAQILAFRRLKRGERNL 358
              QA  P++E   GN A +    +Q+P QR    FTKQQLHVLKAQILAFRRLK+GE  L
Sbjct: 447  APQAGGPTNEGGLGNPAKSQGRPAQMPQQRTN--FTKQQLHVLKAQILAFRRLKKGEGTL 504

Query: 359  PQEVLQAIVPPPIDLQPQQMFGTPGMVNQERPLASGXXXXXXXXXXXXKVPVGTXXXXXX 538
            PQE+L+AIVPPP+++Q QQ   +    NQ++P  +             K P         
Sbjct: 505  PQELLRAIVPPPLEMQAQQPNHSARGQNQDKPAGNIAAEQISPIESSAKEPQSIPSINGQ 564

Query: 539  XXXXXXXXXVEEKAVM-VTHMQGVAGS-TKEPMQIGSVGKVEQ 661
                      +EK+++   H+Q VA   +KE     S GK +Q
Sbjct: 565  SSLKHESFARDEKSIVPPVHVQAVAPPVSKESAPTLSAGKKDQ 607


>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
          Length = 2263

 Score =  127 bits (318), Expect = 2e-27
 Identities = 89/223 (39%), Positives = 116/223 (52%), Gaps = 4/223 (1%)
 Frame = +2

Query: 2    RPPIATGNGGPTMHMPQSSGSMTQGADLS-QSKNTITGPSPGPGPETLQMQYFRSLQQNR 178
            R  +  GNG   MH PQ S +M+QG D    +KNT++G       E+LQMQY R L  NR
Sbjct: 402  RQSVVIGNGMSPMHPPQPSVNMSQGVDHPLHAKNTLSGQ------ESLQMQYLRQL--NR 453

Query: 179  AMSQAAIPSSEVP-GNSAPAHTGS-SQLPPQRAGIGFTKQQLHVLKAQILAFRRLKRGER 352
            +  Q+A+P ++   GN   +  G   Q+P QR   GFTKQQLHVLKAQILAFRRLK+GE 
Sbjct: 454  SSPQSAVPPNDGGLGNHYQSQGGPLPQVPQQR--FGFTKQQLHVLKAQILAFRRLKKGEG 511

Query: 353  NLPQEVLQAIVPPPIDLQPQQMFGTPGMVNQERPLASGXXXXXXXXXXXXKVPVGTXXXX 532
             LPQE+L++I PPP++ Q QQ F     +NQ++                 K         
Sbjct: 512  TLPQELLRSIAPPPLESQLQQAFLPSTAINQDKSAGKNVEDHGRQLESNEKDSQAVPSTN 571

Query: 533  XXXXXXXXXXXVEEKAVMVT-HMQGVAGSTKEPMQIGSVGKVE 658
                        ++KA   T HM G     KEP+ + S GK E
Sbjct: 572  GHNFSKEEAFAGDDKATPSTVHMPGAPTVMKEPIPVLSAGKEE 614


>emb|CBI40396.3| unnamed protein product [Vitis vinifera]
          Length = 1981

 Score =  127 bits (318), Expect = 2e-27
 Identities = 89/223 (39%), Positives = 116/223 (52%), Gaps = 4/223 (1%)
 Frame = +2

Query: 2    RPPIATGNGGPTMHMPQSSGSMTQGADLS-QSKNTITGPSPGPGPETLQMQYFRSLQQNR 178
            R  +  GNG   MH PQ S +M+QG D    +KNT++G       E+LQMQY R L  NR
Sbjct: 402  RQSVVIGNGMSPMHPPQPSVNMSQGVDHPLHAKNTLSGQ------ESLQMQYLRQL--NR 453

Query: 179  AMSQAAIPSSEVP-GNSAPAHTGS-SQLPPQRAGIGFTKQQLHVLKAQILAFRRLKRGER 352
            +  Q+A+P ++   GN   +  G   Q+P QR   GFTKQQLHVLKAQILAFRRLK+GE 
Sbjct: 454  SSPQSAVPPNDGGLGNHYQSQGGPLPQVPQQR--FGFTKQQLHVLKAQILAFRRLKKGEG 511

Query: 353  NLPQEVLQAIVPPPIDLQPQQMFGTPGMVNQERPLASGXXXXXXXXXXXXKVPVGTXXXX 532
             LPQE+L++I PPP++ Q QQ F     +NQ++                 K         
Sbjct: 512  TLPQELLRSIAPPPLESQLQQAFLPSTAINQDKSAGKNVEDHGRQLESNEKDSQAVPSTN 571

Query: 533  XXXXXXXXXXXVEEKAVMVT-HMQGVAGSTKEPMQIGSVGKVE 658
                        ++KA   T HM G     KEP+ + S GK E
Sbjct: 572  GHNFSKEEAFAGDDKATPSTVHMPGAPTVMKEPIPVLSAGKEE 614


>emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]
          Length = 2238

 Score =  127 bits (318), Expect = 2e-27
 Identities = 89/223 (39%), Positives = 116/223 (52%), Gaps = 4/223 (1%)
 Frame = +2

Query: 2    RPPIATGNGGPTMHMPQSSGSMTQGADLS-QSKNTITGPSPGPGPETLQMQYFRSLQQNR 178
            R  +  GNG   MH PQ S +M+QG D    +KNT++G       E+LQMQY R L  NR
Sbjct: 402  RQSVVIGNGMSPMHPPQPSVNMSQGVDHPLHAKNTLSGQ------ESLQMQYLRQL--NR 453

Query: 179  AMSQAAIPSSEVP-GNSAPAHTGS-SQLPPQRAGIGFTKQQLHVLKAQILAFRRLKRGER 352
            +  Q+A+P ++   GN   +  G   Q+P QR   GFTKQQLHVLKAQILAFRRLK+GE 
Sbjct: 454  SSPQSAVPPNDGGLGNHYQSQGGPLPQVPQQR--FGFTKQQLHVLKAQILAFRRLKKGEG 511

Query: 353  NLPQEVLQAIVPPPIDLQPQQMFGTPGMVNQERPLASGXXXXXXXXXXXXKVPVGTXXXX 532
             LPQE+L++I PPP++ Q QQ F     +NQ++                 K         
Sbjct: 512  TLPQELLRSIAPPPLESQLQQAFLPSTAINQDKSAGKNVEDHGRQLESNEKDSQAVPSTN 571

Query: 533  XXXXXXXXXXXVEEKAVMVT-HMQGVAGSTKEPMQIGSVGKVE 658
                        ++KA   T HM G     KEP+ + S GK E
Sbjct: 572  GHNFSKEEAFAGDDKATPSTVHMPGAPTVMKEPIPVLSAGKEE 614


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