BLASTX nr result

ID: Dioscorea21_contig00007071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007071
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002441350.1| hypothetical protein SORBIDRAFT_09g024910 [S...   446   e-123
ref|NP_001167679.1| brix domain-containing protein 1 [Zea mays] ...   446   e-123
ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homo...   445   e-123
ref|NP_001149235.1| LOC100282857 [Zea mays] gi|195625670|gb|ACG3...   443   e-122
ref|NP_001043185.1| Os01g0513800 [Oryza sativa Japonica Group] g...   436   e-120

>ref|XP_002441350.1| hypothetical protein SORBIDRAFT_09g024910 [Sorghum bicolor]
            gi|241946635|gb|EES19780.1| hypothetical protein
            SORBIDRAFT_09g024910 [Sorghum bicolor]
          Length = 310

 Score =  446 bits (1148), Expect = e-123
 Identities = 224/301 (74%), Positives = 254/301 (84%)
 Frame = -1

Query: 1207 AARALEKRAPKLVENGKKTLILHGTKTSGVLNEVLTQIYHLKRGNAVKYTKKNKEIRPFE 1028
            A R L K APKLVE  KKTLILHGTKTS VLN VL+ IYHLKR NAVKYTKKN  IRPFE
Sbjct: 13   ARRELLKHAPKLVETSKKTLILHGTKTSAVLNSVLSDIYHLKRDNAVKYTKKNDNIRPFE 72

Query: 1027 SGGETSLEFYSLKSDCSLFVFGSHSKKRPNNLVLGRLYDHHVYDLVEVGVENLKPMESFV 848
            SGGE+SLEF+SLK+DCSL V+GSHSKKRPNNL+LGR YDHH+YDLVEVGVEN K MES+V
Sbjct: 73   SGGESSLEFFSLKTDCSLIVYGSHSKKRPNNLILGRTYDHHIYDLVEVGVENYKSMESYV 132

Query: 847  YDKKLAPKIGSKPFFAFIGEGFXXXXXXXXXXXXXLDLFRGEVVENLNLAGVDRVYVCTA 668
            YDKKLAPK+GSKPFFAFIGE F             LDLF+GEVVENLNLAGVDR+YVCTA
Sbjct: 133  YDKKLAPKLGSKPFFAFIGEHFESAEELKHLKEVLLDLFKGEVVENLNLAGVDRIYVCTA 192

Query: 667  ISPTTVFFTHCALRLKRSGTTIPRMELVEIGPSMDFVVRRHRLPNDSLKKEAMKTASQQS 488
            ISPTTV+  HCALRLKRSGT+IPRMELVE+GPSMD VVRRHRLP +SLKKEAMKTA + +
Sbjct: 193  ISPTTVYIMHCALRLKRSGTSIPRMELVEVGPSMDLVVRRHRLPVESLKKEAMKTA-EHA 251

Query: 487  KKVKNVSRDVVQGKIGKIYMPDQQVGGMALSNDIKGLKRQRREAKTKNSAKEDQAKKRKT 308
            KK+KNV++D V+GK+GK+YMPDQQVG + LSND+KGLKR+RREAK  N    + +KK+K 
Sbjct: 252  KKMKNVTKDPVKGKLGKVYMPDQQVGKLTLSNDVKGLKRERREAKKNN----EDSKKQKV 307

Query: 307  D 305
            +
Sbjct: 308  N 308


>ref|NP_001167679.1| brix domain-containing protein 1 [Zea mays]
            gi|195626328|gb|ACG34994.1| brix domain-containing
            protein 1 [Zea mays] gi|238008032|gb|ACR35051.1| unknown
            [Zea mays]
          Length = 309

 Score =  446 bits (1147), Expect = e-123
 Identities = 223/294 (75%), Positives = 249/294 (84%)
 Frame = -1

Query: 1207 AARALEKRAPKLVENGKKTLILHGTKTSGVLNEVLTQIYHLKRGNAVKYTKKNKEIRPFE 1028
            A R L K APKLVE  KKTLILHGTKTS VLN VL+ IYHLKR NAVKYTKKN  IRPFE
Sbjct: 13   ARRELLKHAPKLVETSKKTLILHGTKTSAVLNSVLSDIYHLKRDNAVKYTKKNDNIRPFE 72

Query: 1027 SGGETSLEFYSLKSDCSLFVFGSHSKKRPNNLVLGRLYDHHVYDLVEVGVENLKPMESFV 848
            SGGE+SLEF+SLK+DCSL V+GSHSKKRPNNL+LGR YDHH+YDLVEVGVEN K MES+V
Sbjct: 73   SGGESSLEFFSLKADCSLIVYGSHSKKRPNNLILGRTYDHHIYDLVEVGVENYKSMESYV 132

Query: 847  YDKKLAPKIGSKPFFAFIGEGFXXXXXXXXXXXXXLDLFRGEVVENLNLAGVDRVYVCTA 668
            YDKKLAP +GSKPFFAFIGE F             LDLFRGEVVENLNLAGVDR+YVCTA
Sbjct: 133  YDKKLAPLLGSKPFFAFIGEHFESAEELKHLKEVLLDLFRGEVVENLNLAGVDRIYVCTA 192

Query: 667  ISPTTVFFTHCALRLKRSGTTIPRMELVEIGPSMDFVVRRHRLPNDSLKKEAMKTASQQS 488
            ISPTTV+  HCALRLKRSGT+IPRMELVE+GPSMD VVRRHRLP +SLKKEAMKTA + +
Sbjct: 193  ISPTTVYMMHCALRLKRSGTSIPRMELVEVGPSMDLVVRRHRLPAESLKKEAMKTA-EHA 251

Query: 487  KKVKNVSRDVVQGKIGKIYMPDQQVGGMALSNDIKGLKRQRREAKTKNSAKEDQ 326
            KK+KNV++D VQGK+GK+YMPDQQVG + LSNDIKGLKR+RREAK    +K+ +
Sbjct: 252  KKMKNVTKDPVQGKLGKVYMPDQQVGKLTLSNDIKGLKRERREAKKNQDSKKQK 305


>ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homolog [Vitis vinifera]
            gi|297740066|emb|CBI30248.3| unnamed protein product
            [Vitis vinifera]
          Length = 315

 Score =  445 bits (1145), Expect = e-123
 Identities = 218/303 (71%), Positives = 254/303 (83%), Gaps = 1/303 (0%)
 Frame = -1

Query: 1207 AARALEKRAPKLVENGKKTLILHGTKTSGVLNEVLTQIYHLKRGNAVKYTKKNKEIRPFE 1028
            A R +EKRAPKLVE+GKKTLIL GTKTS VLN VLT+IYHLK+ +AV+YT+KN+ IRPFE
Sbjct: 12   AKREIEKRAPKLVESGKKTLILQGTKTSNVLNAVLTEIYHLKKDSAVRYTRKNENIRPFE 71

Query: 1027 SGGETSLEFYSLKSDCSLFVFGSHSKKRPNNLVLGRLYDHHVYDLVEVGVENLKPMESFV 848
            SGGETSLEF+SLK+DCS+FVFGSHSKKRP+NLV+GR YDHH+YDLVEVGVEN K MESF 
Sbjct: 72   SGGETSLEFFSLKTDCSIFVFGSHSKKRPDNLVIGRTYDHHIYDLVEVGVENFKSMESFT 131

Query: 847  YDKKLAPKIGSKPFFAFIGEGFXXXXXXXXXXXXXLDLFRGEVVENLNLAGVDRVYVCTA 668
            YDKKL+PK+GSKPF AFIGEGF             LDL RGEVVENLNLAG+D  Y+CTA
Sbjct: 132  YDKKLSPKVGSKPFIAFIGEGFESVDELKHLKEVLLDLLRGEVVENLNLAGLDHAYICTA 191

Query: 667  ISPTTVFFTHCALRLKRSGTTIPRMELVEIGPSMDFVVRRHRLPNDSLKKEAMKTASQQ- 491
            +S   VFFTHCA+RLK+SGT +PRMELVE+GPSMD VVRRHRLPNDS++KEAMKTA +Q 
Sbjct: 192  VSSNRVFFTHCAMRLKKSGTIVPRMELVEVGPSMDLVVRRHRLPNDSVRKEAMKTAKEQP 251

Query: 490  SKKVKNVSRDVVQGKIGKIYMPDQQVGGMALSNDIKGLKRQRREAKTKNSAKEDQAKKRK 311
             KKVKNVS+DV+QGK+GKIY+PDQQVG +AL    KGLKR+RREAK K+   +   KK+K
Sbjct: 252  KKKVKNVSQDVIQGKVGKIYVPDQQVGSVALPYKAKGLKRERREAKMKHETNDRAPKKQK 311

Query: 310  TDS 302
             +S
Sbjct: 312  ENS 314


>ref|NP_001149235.1| LOC100282857 [Zea mays] gi|195625670|gb|ACG34665.1| brix
            domain-containing protein 1 [Zea mays]
            gi|413945951|gb|AFW78600.1| brix domain-containing
            protein 1 [Zea mays]
          Length = 309

 Score =  443 bits (1140), Expect = e-122
 Identities = 221/294 (75%), Positives = 248/294 (84%)
 Frame = -1

Query: 1207 AARALEKRAPKLVENGKKTLILHGTKTSGVLNEVLTQIYHLKRGNAVKYTKKNKEIRPFE 1028
            A R L K APKLVE  KKTLILHGTKTS VLN VL+ IYHLKR NAVKYTKKN  IRPFE
Sbjct: 13   ARRELLKHAPKLVETSKKTLILHGTKTSAVLNSVLSDIYHLKRDNAVKYTKKNDNIRPFE 72

Query: 1027 SGGETSLEFYSLKSDCSLFVFGSHSKKRPNNLVLGRLYDHHVYDLVEVGVENLKPMESFV 848
            SGGE+SLEF+SLK+DCSL V+GSHSKKRPNNL+L R YDHH+YDLVEVGVEN K MES+V
Sbjct: 73   SGGESSLEFFSLKADCSLIVYGSHSKKRPNNLILARTYDHHIYDLVEVGVENYKSMESYV 132

Query: 847  YDKKLAPKIGSKPFFAFIGEGFXXXXXXXXXXXXXLDLFRGEVVENLNLAGVDRVYVCTA 668
            YDKKLAP +GSKPFFAFIGE F             LDLFRGEVVENLNLAGVDR+YVCTA
Sbjct: 133  YDKKLAPLLGSKPFFAFIGEHFESSEELKHLKEVLLDLFRGEVVENLNLAGVDRIYVCTA 192

Query: 667  ISPTTVFFTHCALRLKRSGTTIPRMELVEIGPSMDFVVRRHRLPNDSLKKEAMKTASQQS 488
            ISPTTV+  HCALRLKRSGT+IPRMELVE+GPSMD VVRRHRLP +SLKKEAMKTA + +
Sbjct: 193  ISPTTVYMMHCALRLKRSGTSIPRMELVEVGPSMDLVVRRHRLPAESLKKEAMKTA-EHA 251

Query: 487  KKVKNVSRDVVQGKIGKIYMPDQQVGGMALSNDIKGLKRQRREAKTKNSAKEDQ 326
            KK+KNV++D VQGK+GK+YMPDQQVG + LSND+KGLKR+RREAK    +K+ +
Sbjct: 252  KKMKNVTKDPVQGKLGKVYMPDQQVGKLTLSNDVKGLKRERREAKKNQDSKKQK 305


>ref|NP_001043185.1| Os01g0513800 [Oryza sativa Japonica Group]
            gi|18202717|sp|Q9AWM9.1|RPF2_ORYSJ RecName: Full=Ribosome
            production factor 2 homolog; AltName: Full=Brix
            domain-containing protein 1 homolog; AltName:
            Full=Ribosome biogenesis protein RPF2 homolog
            gi|13161376|dbj|BAB32971.1| brix domain containing
            protein 1 (33.5 kD)-like protein [Oryza sativa Japonica
            Group] gi|113532716|dbj|BAF05099.1| Os01g0513800 [Oryza
            sativa Japonica Group] gi|125526163|gb|EAY74277.1|
            hypothetical protein OsI_02165 [Oryza sativa Indica
            Group] gi|125570593|gb|EAZ12108.1| hypothetical protein
            OsJ_01990 [Oryza sativa Japonica Group]
            gi|215704732|dbj|BAG94760.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 310

 Score =  436 bits (1121), Expect = e-120
 Identities = 221/299 (73%), Positives = 252/299 (84%)
 Frame = -1

Query: 1207 AARALEKRAPKLVENGKKTLILHGTKTSGVLNEVLTQIYHLKRGNAVKYTKKNKEIRPFE 1028
            A R L K APKLVE GKKTLILHGTKTS VLN VL  ++HLKR NAVKY+KKN  IRPFE
Sbjct: 13   AKRELLKHAPKLVETGKKTLILHGTKTSAVLNSVLADLFHLKRDNAVKYSKKNDNIRPFE 72

Query: 1027 SGGETSLEFYSLKSDCSLFVFGSHSKKRPNNLVLGRLYDHHVYDLVEVGVENLKPMESFV 848
            SGGETSLEF+SLK+DCSL V+GSHSKKRPNNLVLGR YDHH+YDLVEVGVEN K +ES+V
Sbjct: 73   SGGETSLEFFSLKTDCSLIVYGSHSKKRPNNLVLGRTYDHHIYDLVEVGVENYKSIESYV 132

Query: 847  YDKKLAPKIGSKPFFAFIGEGFXXXXXXXXXXXXXLDLFRGEVVENLNLAGVDRVYVCTA 668
            YDKKLAPK+GSKPFFAFIGE F             LDLF+GEVVENLNLAGVDRV+VCTA
Sbjct: 133  YDKKLAPKLGSKPFFAFIGEHFESVEELKHLKEVLLDLFKGEVVENLNLAGVDRVFVCTA 192

Query: 667  ISPTTVFFTHCALRLKRSGTTIPRMELVEIGPSMDFVVRRHRLPNDSLKKEAMKTASQQS 488
            ISPTTV+  HCALRLKRSGT+IPR+ELVE+GPSMD VVRRHR P +SLKKEAMKTA   +
Sbjct: 193  ISPTTVYMMHCALRLKRSGTSIPRIELVEVGPSMDLVVRRHRYPVESLKKEAMKTA-DHA 251

Query: 487  KKVKNVSRDVVQGKIGKIYMPDQQVGGMALSNDIKGLKRQRREAKTKNSAKEDQAKKRK 311
            KK+KNV++D V GK+GK+Y+PDQQ+  M+LSND+KGLKR+RREAK KN   +D +KK+K
Sbjct: 252  KKMKNVTKDPVHGKLGKVYIPDQQIAKMSLSNDVKGLKRERREAK-KN---KDHSKKQK 306


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