BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007040
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC78384.1| hypothetical protein OsI_18162 [Oryza sativa Indi...   414   e-113
ref|NP_001054440.2| Os05g0110500 [Oryza sativa Japonica Group] g...   412   e-113
gb|AAU44200.1| putative ATP-dependent RNA helicase [Oryza sativa...   412   e-113
ref|XP_003569099.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   409   e-112
ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putativ...   408   e-111

>gb|EEC78384.1| hypothetical protein OsI_18162 [Oryza sativa Indica Group]
          Length = 591

 Score =  414 bits (1063), Expect = e-113
 Identities = 206/299 (68%), Positives = 248/299 (82%)
 Frame = +3

Query: 51  KDEEKSGIFASCSFSDLGLHPTLCQHLQERMGFEVPTQIQAQAIPVVISGQHVLVNAATG 230
           K+E+K G+FASCSF+DLGLHPTLC HLQ++MGF+ PT+IQAQAIPV +SGQH+LV AATG
Sbjct: 12  KEEDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATG 71

Query: 231 TGKTIVYLAPIVHLLQMYEPRIERSHGTFALVLVPTRELCMQVYEILQKLLHRFHWIVPG 410
           TGKT+ YLAPIVHLLQM EPR+ER+ GTFALVLVPTRELC+QVY I Q+L+HRFHW+VPG
Sbjct: 72  TGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPG 131

Query: 411 YIMGGENRSKEKARLRKGINILIATPGRLLDHLRNTSSFAYEKLRWIVFDEADRILELGF 590
           YIMGGENR+KEKARLRKGI+ILIATPGRLLDHL++TSSF Y  +RWIVFDEAD ILELGF
Sbjct: 132 YIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGF 191

Query: 591 GKAIEEILDILGSRHGASGTGENTTGKTFNVKRQNLLLSATLNDKVNQLANISLENPIMV 770
           GKA+E+IL+ LGSR+ AS   +N   K   +KRQNLLLSATLN+KVN+LA ISL+NP+M+
Sbjct: 192 GKALEDILEHLGSRNDASNQNKN---KMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMI 248

Query: 771 GLDKKISSEPPKPSVKKIAFLESDEEEIAEHVDMATNVGVESYNLPTQLIQKCVKVSCG 947
           GLD++ SS   K      + L  DEEEI E  ++     V+ + LP QL+Q+ VKVSCG
Sbjct: 249 GLDEQNSSAHGK---NHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCG 304


>ref|NP_001054440.2| Os05g0110500 [Oryza sativa Japonica Group]
           gi|143361335|sp|Q0DLB9.2|RH17_ORYSJ RecName:
           Full=DEAD-box ATP-dependent RNA helicase 17
           gi|222629939|gb|EEE62071.1| hypothetical protein
           OsJ_16855 [Oryza sativa Japonica Group]
           gi|255675949|dbj|BAF16354.2| Os05g0110500 [Oryza sativa
           Japonica Group]
          Length = 591

 Score =  412 bits (1059), Expect = e-113
 Identities = 205/299 (68%), Positives = 247/299 (82%)
 Frame = +3

Query: 51  KDEEKSGIFASCSFSDLGLHPTLCQHLQERMGFEVPTQIQAQAIPVVISGQHVLVNAATG 230
           K+E+K G+FASCSF+DLGLHPTLC HLQ++MGF+ PT+IQAQAIPV +SGQH+LV AATG
Sbjct: 12  KEEDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATG 71

Query: 231 TGKTIVYLAPIVHLLQMYEPRIERSHGTFALVLVPTRELCMQVYEILQKLLHRFHWIVPG 410
           TGKT+ YLAPIVHLLQM EPR+ER+ GTFALVLVPTRELC+QVY I Q+L+HRFHW+VPG
Sbjct: 72  TGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPG 131

Query: 411 YIMGGENRSKEKARLRKGINILIATPGRLLDHLRNTSSFAYEKLRWIVFDEADRILELGF 590
           YIMGGENR+KEKARLRKGI+ILIATPGRLLDHL++TSSF Y  +RWIVFDEAD ILELGF
Sbjct: 132 YIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGF 191

Query: 591 GKAIEEILDILGSRHGASGTGENTTGKTFNVKRQNLLLSATLNDKVNQLANISLENPIMV 770
           GKA+E+IL+ LGSR+  S   +N   K   +KRQNLLLSATLN+KVN+LA ISL+NP+M+
Sbjct: 192 GKALEDILEHLGSRNDTSNQNKN---KMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMI 248

Query: 771 GLDKKISSEPPKPSVKKIAFLESDEEEIAEHVDMATNVGVESYNLPTQLIQKCVKVSCG 947
           GLD++ SS   K      + L  DEEEI E  ++     V+ + LP QL+Q+ VKVSCG
Sbjct: 249 GLDEQNSSAHGK---NHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCG 304


>gb|AAU44200.1| putative ATP-dependent RNA helicase [Oryza sativa Japonica Group]
           gi|215765668|dbj|BAG87365.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 434

 Score =  412 bits (1059), Expect = e-113
 Identities = 205/299 (68%), Positives = 247/299 (82%)
 Frame = +3

Query: 51  KDEEKSGIFASCSFSDLGLHPTLCQHLQERMGFEVPTQIQAQAIPVVISGQHVLVNAATG 230
           K+E+K G+FASCSF+DLGLHPTLC HLQ++MGF+ PT+IQAQAIPV +SGQH+LV AATG
Sbjct: 12  KEEDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATG 71

Query: 231 TGKTIVYLAPIVHLLQMYEPRIERSHGTFALVLVPTRELCMQVYEILQKLLHRFHWIVPG 410
           TGKT+ YLAPIVHLLQM EPR+ER+ GTFALVLVPTRELC+QVY I Q+L+HRFHW+VPG
Sbjct: 72  TGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPG 131

Query: 411 YIMGGENRSKEKARLRKGINILIATPGRLLDHLRNTSSFAYEKLRWIVFDEADRILELGF 590
           YIMGGENR+KEKARLRKGI+ILIATPGRLLDHL++TSSF Y  +RWIVFDEAD ILELGF
Sbjct: 132 YIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGF 191

Query: 591 GKAIEEILDILGSRHGASGTGENTTGKTFNVKRQNLLLSATLNDKVNQLANISLENPIMV 770
           GKA+E+IL+ LGSR+  S   +N   K   +KRQNLLLSATLN+KVN+LA ISL+NP+M+
Sbjct: 192 GKALEDILEHLGSRNDTSNQNKN---KMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMI 248

Query: 771 GLDKKISSEPPKPSVKKIAFLESDEEEIAEHVDMATNVGVESYNLPTQLIQKCVKVSCG 947
           GLD++ SS   K      + L  DEEEI E  ++     V+ + LP QL+Q+ VKVSCG
Sbjct: 249 GLDEQNSSAHGK---NHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCG 304


>ref|XP_003569099.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like
           [Brachypodium distachyon]
          Length = 605

 Score =  409 bits (1051), Expect = e-112
 Identities = 203/303 (66%), Positives = 247/303 (81%), Gaps = 2/303 (0%)
 Frame = +3

Query: 45  KKKDEEKSGIFASCSFSDLGLHPTLCQHLQERMGFEVPTQIQAQAIPVVISGQHVLVNAA 224
           K+K E+  G+F+S SF+DLGLHPTLC HLQ++MGF+ PT+IQAQAIPV +SGQH+LV AA
Sbjct: 19  KEKQEDDEGLFSSRSFADLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHLLVKAA 78

Query: 225 TGTGKTIVYLAPIVHLLQMYEPRIERSHGTFALVLVPTRELCMQVYEILQKLLHRFHWIV 404
           TGTGKT+ YLAPIVHLLQM EPR+ER+HGTFALV+VPTRELC+QVY I Q+L+HRFHW+V
Sbjct: 79  TGTGKTLAYLAPIVHLLQMREPRVERTHGTFALVIVPTRELCLQVYGIAQQLVHRFHWLV 138

Query: 405 PGYIMGGENRSKEKARLRKGINILIATPGRLLDHLRNTSSFAYEKLRWIVFDEADRILEL 584
           PGY+MGGE+RSKEKARLRKGI+ILIATPGRLLDHL++TSSF Y  LRWIVFDEAD ILEL
Sbjct: 139 PGYVMGGESRSKEKARLRKGISILIATPGRLLDHLQHTSSFVYSNLRWIVFDEADSILEL 198

Query: 585 GFGKAIEEILDILGSRHGASGTGENTTGKTFNVKRQNLLLSATLNDKVNQLANISLENPI 764
           GFGKA+E+IL +LGSR+ AS   +    K+  ++RQNLLLSATLN+KVN+LANISL+NP+
Sbjct: 199 GFGKAVEDILGLLGSRNDAS---DQNKSKSDTLQRQNLLLSATLNEKVNRLANISLKNPV 255

Query: 765 MVGLD--KKISSEPPKPSVKKIAFLESDEEEIAEHVDMATNVGVESYNLPTQLIQKCVKV 938
           ++GLD  KK S        K  + L  DEEEI E  +      V+ + LP QL+Q+ VKV
Sbjct: 256 LIGLDEQKKPSERSSALGKKHTSLLSDDEEEILEKRNDIVESAVDDFKLPAQLVQRYVKV 315

Query: 939 SCG 947
           SCG
Sbjct: 316 SCG 318


>ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533687|gb|EEF35422.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 603

 Score =  408 bits (1048), Expect = e-111
 Identities = 205/315 (65%), Positives = 242/315 (76%)
 Frame = +3

Query: 3   KSKPEENDGDRCSKKKKDEEKSGIFASCSFSDLGLHPTLCQHLQERMGFEVPTQIQAQAI 182
           K K  + + +    K+       +FASCSF +LGLHPTLC  L+ERMGFE PT +QAQAI
Sbjct: 4   KKKKMKREREEEEAKETKNNNPEMFASCSFLNLGLHPTLCDQLRERMGFEAPTTVQAQAI 63

Query: 183 PVVISGQHVLVNAATGTGKTIVYLAPIVHLLQMYEPRIERSHGTFALVLVPTRELCMQVY 362
           PVV+SG+HVLVNAATGTGKT+ YLAPI+H LQ Y PRIER+HGTFALVLVPTRELC+QVY
Sbjct: 64  PVVLSGRHVLVNAATGTGKTVAYLAPIIHHLQSYSPRIERAHGTFALVLVPTRELCLQVY 123

Query: 363 EILQKLLHRFHWIVPGYIMGGENRSKEKARLRKGINILIATPGRLLDHLRNTSSFAYEKL 542
           EILQ LLHRFHWIVPGYIMGGE+RSKEKARLRKGI+IL+ATPGRLLDHL+NTSSF++  L
Sbjct: 124 EILQGLLHRFHWIVPGYIMGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFSHTNL 183

Query: 543 RWIVFDEADRILELGFGKAIEEILDILGSRHGASGTGENTTGKTFNVKRQNLLLSATLND 722
           RWI+FDEADRILELGFGK IE+ILD+LGSR   S    N      N +RQNLLLSATLN+
Sbjct: 184 RWIIFDEADRILELGFGKEIEDILDLLGSRLTRSVGKGNRDSSISNYQRQNLLLSATLNE 243

Query: 723 KVNQLANISLENPIMVGLDKKISSEPPKPSVKKIAFLESDEEEIAEHVDMATNVGVESYN 902
           KVN LANISLENP+M+GLD +     P+P ++    L+SD ++  EH           + 
Sbjct: 244 KVNHLANISLENPVMIGLDDE--KMQPEPLLEHTKSLKSDADDELEHPSKVLKPSTGDFK 301

Query: 903 LPTQLIQKCVKVSCG 947
           +P QL+QK VKV CG
Sbjct: 302 VPVQLVQKYVKVPCG 316