BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007036
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522772.1| ribosomal RNA small subunit methyltransferas...   264   1e-68
ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|2...   256   3e-66
ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methy...   255   6e-66
ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methy...   251   8e-65
emb|CAN67145.1| hypothetical protein VITISV_042360 [Vitis vinifera]   249   4e-64

>ref|XP_002522772.1| ribosomal RNA small subunit methyltransferase B, putative [Ricinus
           communis] gi|223538010|gb|EEF39623.1| ribosomal RNA
           small subunit methyltransferase B, putative [Ricinus
           communis]
          Length = 527

 Score =  264 bits (674), Expect = 1e-68
 Identities = 141/216 (65%), Positives = 156/216 (72%)
 Frame = -1

Query: 650 KAGLKSKQRIQKINEEVSPHRAVSAVRLLRIEQGGAFADLLSDKGRGAAENEMAYVERTL 471
           K  +   ++ QK+N EVSPHRAVSAVRL+RIE GGAFADLL++KG+G+ ENEM YVERTL
Sbjct: 42  KGPVSPLKKTQKLNLEVSPHRAVSAVRLMRIEMGGAFADLLNEKGKGSGENEMGYVERTL 101

Query: 470 GFRTXXXXXXXXXLVTDIVGGAVRWRRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 291
           GFRT         LVTD+VGG +RWRR L                               
Sbjct: 102 GFRTKNLDDRDLRLVTDVVGGTIRWRRFLDHLICSLFHDENTFRSMEP------------ 149

Query: 290 XXXLLLQILRIGFFEIVKLAMPPYAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKETN 111
              LLLQILRIG +EIVKL MPPYAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKE N
Sbjct: 150 ---LLLQILRIGAYEIVKLDMPPYAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKENN 206

Query: 110 SLPLPKIEGDARAQARALAVIHSHPVWMVRRWTNFL 3
           SLPLPK+EGDARAQARALA +HSHPVWMVRRWT +L
Sbjct: 207 SLPLPKLEGDARAQARALATLHSHPVWMVRRWTKYL 242


>ref|XP_002300381.1| predicted protein [Populus trichocarpa] gi|222847639|gb|EEE85186.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  256 bits (654), Expect = 3e-66
 Identities = 137/209 (65%), Positives = 153/209 (73%)
 Frame = -1

Query: 629 QRIQKINEEVSPHRAVSAVRLLRIEQGGAFADLLSDKGRGAAENEMAYVERTLGFRTXXX 450
           ++ QK+N +VSPHRAVSAVRL+RIE GGAFADLL+DKG+G+ +NEM YVERTLGFRT   
Sbjct: 49  RKTQKLNLQVSPHRAVSAVRLMRIEMGGAFADLLNDKGKGSGDNEMGYVERTLGFRTKDL 108

Query: 449 XXXXXXLVTDIVGGAVRWRRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLQ 270
                 LVTDIVGG +RWRR L                                  LLLQ
Sbjct: 109 DDRDLRLVTDIVGGTIRWRRYLDYLIGSLCHDEKAFRSMEP---------------LLLQ 153

Query: 269 ILRIGFFEIVKLAMPPYAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKETNSLPLPKI 90
           ILRIGF+EIVKL MP YAVVDENVRLAKV+LRPGAGNMVNGILRKLVLLKE+NSLPLPK+
Sbjct: 154 ILRIGFYEIVKLDMPSYAVVDENVRLAKVSLRPGAGNMVNGILRKLVLLKESNSLPLPKL 213

Query: 89  EGDARAQARALAVIHSHPVWMVRRWTNFL 3
           EGD RAQARALA ++SHPVWMVRRWT  L
Sbjct: 214 EGDDRAQARALATLYSHPVWMVRRWTKLL 242


>ref|XP_003519634.1| PREDICTED: ribosomal RNA small subunit methyltransferase B-like
           [Glycine max]
          Length = 528

 Score =  255 bits (651), Expect = 6e-66
 Identities = 137/216 (63%), Positives = 153/216 (70%)
 Frame = -1

Query: 650 KAGLKSKQRIQKINEEVSPHRAVSAVRLLRIEQGGAFADLLSDKGRGAAENEMAYVERTL 471
           K G     + QK+N EVSPHRAVSAVRL+RIE GGAFADLL++KG+G+ ENEM YV+RTL
Sbjct: 44  KGGGNRLLKTQKLNSEVSPHRAVSAVRLMRIELGGAFADLLNEKGKGSGENEMGYVQRTL 103

Query: 470 GFRTXXXXXXXXXLVTDIVGGAVRWRRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 291
           GFRT         LVTDIVGG +RWRR L                               
Sbjct: 104 GFRTRELNHHDLRLVTDIVGGTIRWRRYLDHLISSLCHDKDISSMEP------------- 150

Query: 290 XXXLLLQILRIGFFEIVKLAMPPYAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKETN 111
              LLLQILRIGF+EIVKL MPPYAVVDENV+LAK ALRPGAGNMVNGILRKLV+LKE  
Sbjct: 151 ---LLLQILRIGFYEIVKLDMPPYAVVDENVKLAKFALRPGAGNMVNGILRKLVVLKEKE 207

Query: 110 SLPLPKIEGDARAQARALAVIHSHPVWMVRRWTNFL 3
           SLPLPK+EGD RAQARALA ++SHPVWMVRRWT +L
Sbjct: 208 SLPLPKVEGDDRAQARALATLYSHPVWMVRRWTKYL 243


>ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methyltransferase B [Vitis
           vinifera] gi|296089930|emb|CBI39749.3| unnamed protein
           product [Vitis vinifera]
          Length = 525

 Score =  251 bits (641), Expect = 8e-65
 Identities = 134/212 (63%), Positives = 152/212 (71%)
 Frame = -1

Query: 638 KSKQRIQKINEEVSPHRAVSAVRLLRIEQGGAFADLLSDKGRGAAENEMAYVERTLGFRT 459
           ++  R   +N E+SPHRAVSAVRL+RIE GGAFADLL+++G+G+ +NEM YVERTLGFRT
Sbjct: 44  RNANRTYGVNLEISPHRAVSAVRLMRIELGGAFADLLNERGKGSGDNEMGYVERTLGFRT 103

Query: 458 XXXXXXXXXLVTDIVGGAVRWRRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 279
                    LVTDIVGG++RWRR L                                  L
Sbjct: 104 RDLDDRDLRLVTDIVGGSIRWRRYLDHLIVSLCHDSKTFRSMEP---------------L 148

Query: 278 LLQILRIGFFEIVKLAMPPYAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKETNSLPL 99
           LLQILRIGF+EIV L MPPYAVVDENVRLAKVALRPGAGNMVN ILRKLVLLKE NSLPL
Sbjct: 149 LLQILRIGFYEIVNLDMPPYAVVDENVRLAKVALRPGAGNMVNAILRKLVLLKEKNSLPL 208

Query: 98  PKIEGDARAQARALAVIHSHPVWMVRRWTNFL 3
           PK+EGD RAQARALA ++SHPVWMVRRWT +L
Sbjct: 209 PKLEGDDRAQARALATLYSHPVWMVRRWTKYL 240


>emb|CAN67145.1| hypothetical protein VITISV_042360 [Vitis vinifera]
          Length = 324

 Score =  249 bits (635), Expect = 4e-64
 Identities = 133/212 (62%), Positives = 151/212 (71%)
 Frame = -1

Query: 638 KSKQRIQKINEEVSPHRAVSAVRLLRIEQGGAFADLLSDKGRGAAENEMAYVERTLGFRT 459
           ++  R   +N E+SPHRAVSAVRL+RIE GGAFADLL+++G+G+ +NEM YVERTLGFRT
Sbjct: 44  RNANRTYGVNLEISPHRAVSAVRLMRIELGGAFADLLNERGKGSGDNEMGYVERTLGFRT 103

Query: 458 XXXXXXXXXLVTDIVGGAVRWRRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 279
                    LVTDIVGG++RWRR L                                  L
Sbjct: 104 RDLDDRDLRLVTDIVGGSIRWRRYLDHLIVSLCHDSKTFRSMEP---------------L 148

Query: 278 LLQILRIGFFEIVKLAMPPYAVVDENVRLAKVALRPGAGNMVNGILRKLVLLKETNSLPL 99
           LLQILRIGF+EIV L MPPYAVVDENVRLAKVALRPGA NMVN ILRKLVLLKE NSLPL
Sbjct: 149 LLQILRIGFYEIVNLDMPPYAVVDENVRLAKVALRPGAANMVNAILRKLVLLKEKNSLPL 208

Query: 98  PKIEGDARAQARALAVIHSHPVWMVRRWTNFL 3
           PK+EGD RAQARALA ++SHPVWMVRRWT +L
Sbjct: 209 PKLEGDDRAQARALATLYSHPVWMVRRWTKYL 240