BLASTX nr result

ID: Dioscorea21_contig00007009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00007009
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298205.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...   132   2e-29
ref|XP_003634891.1| PREDICTED: uncharacterized protein LOC100853...   132   4e-29
emb|CBI40659.3| unnamed protein product [Vitis vinifera]              132   4e-29
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                  131   7e-29

>ref|XP_002298205.1| predicted protein [Populus trichocarpa] gi|222845463|gb|EEE83010.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score =  133 bits (334), Expect = 2e-29
 Identities = 69/97 (71%), Positives = 78/97 (80%)
 Frame = +2

Query: 8   GDWRTQLQPEARQRIVNKIMETLERHLPIPSSEGLIELKKIAVRFEEKIYTAATSQTDYL 187
           GDWRTQLQP+ARQRIVNKIMETL+RHLP    EGL ELKKIAVRFEEKIYTAATSQ+DYL
Sbjct: 20  GDWRTQLQPDARQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQSDYL 79

Query: 188 RKISLKMLPLEAKAQNAASISPPSQNPAGGNQSNVDP 298
           RKISLKML +E K+Q+    S P  +   GN+  +DP
Sbjct: 80  RKISLKMLAMENKSQSTIPNSLPPNSTGSGNKP-LDP 115


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score =  132 bits (333), Expect = 2e-29
 Identities = 69/97 (71%), Positives = 76/97 (78%)
 Frame = +2

Query: 8   GDWRTQLQPEARQRIVNKIMETLERHLPIPSSEGLIELKKIAVRFEEKIYTAATSQTDYL 187
           GDWR  LQP++RQRIVNKIMETL+RHLP    EGL ELKKIAVRFEEKIYTAATSQ+DYL
Sbjct: 20  GDWRATLQPDSRQRIVNKIMETLKRHLPFSGQEGLEELKKIAVRFEEKIYTAATSQSDYL 79

Query: 188 RKISLKMLPLEAKAQNAASISPPSQNPAGGNQSNVDP 298
           RKISLKML +E+K+QN    S P  NP G N    DP
Sbjct: 80  RKISLKMLTMESKSQNNVPNSVP-PNPFGNNNRPPDP 115


>ref|XP_003634891.1| PREDICTED: uncharacterized protein LOC100853144 [Vitis vinifera]
          Length = 170

 Score =  132 bits (331), Expect = 4e-29
 Identities = 67/97 (69%), Positives = 80/97 (82%)
 Frame = +2

Query: 8   GDWRTQLQPEARQRIVNKIMETLERHLPIPSSEGLIELKKIAVRFEEKIYTAATSQTDYL 187
           GDWRTQL P++RQRIVNKIM+TL+RHLP+   EGL EL+KIAVRFEEKIYTAATSQ+DYL
Sbjct: 4   GDWRTQLPPDSRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAVRFEEKIYTAATSQSDYL 63

Query: 188 RKISLKMLPLEAKAQNAASISPPSQNPAGGNQSNVDP 298
           RKISLKML +E K+Q A   + PS N AG +++  DP
Sbjct: 64  RKISLKMLTMETKSQTAMPSNLPS-NSAGNSKNPPDP 99


>emb|CBI40659.3| unnamed protein product [Vitis vinifera]
          Length = 114

 Score =  132 bits (331), Expect = 4e-29
 Identities = 67/97 (69%), Positives = 80/97 (82%)
 Frame = +2

Query: 8   GDWRTQLQPEARQRIVNKIMETLERHLPIPSSEGLIELKKIAVRFEEKIYTAATSQTDYL 187
           GDWRTQL P++RQRIVNKIM+TL+RHLP+   EGL EL+KIAVRFEEKIYTAATSQ+DYL
Sbjct: 4   GDWRTQLPPDSRQRIVNKIMDTLKRHLPVSGQEGLHELRKIAVRFEEKIYTAATSQSDYL 63

Query: 188 RKISLKMLPLEAKAQNAASISPPSQNPAGGNQSNVDP 298
           RKISLKML +E K+Q A   + PS N AG +++  DP
Sbjct: 64  RKISLKMLTMETKSQTAMPSNLPS-NSAGNSKNPPDP 99


>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score =  131 bits (329), Expect = 7e-29
 Identities = 65/92 (70%), Positives = 76/92 (82%)
 Frame = +2

Query: 8   GDWRTQLQPEARQRIVNKIMETLERHLPIPSSEGLIELKKIAVRFEEKIYTAATSQTDYL 187
           GDWRTQLQP++RQRIVNKIM+TL+RHLP    +GL ELKKIA RFEEKIYTAA+SQ+DYL
Sbjct: 35  GDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDYL 94

Query: 188 RKISLKMLPLEAKAQNAASISPPSQNPAGGNQ 283
           RKISLKML +E+K+QNA   S  S NP   N+
Sbjct: 95  RKISLKMLSMESKSQNAMPNSLQSNNPGSSNR 126


Top