BLASTX nr result

ID: Dioscorea21_contig00006966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006966
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264979.1| PREDICTED: nifU-like protein 4, mitochondria...   369   e-100
ref|XP_002439319.1| hypothetical protein SORBIDRAFT_09g004310 [S...   365   9e-99
gb|EAY96612.1| hypothetical protein OsI_18522 [Oryza sativa Indi...   364   3e-98
ref|XP_003568893.1| PREDICTED: nifU-like protein 4, mitochondria...   362   8e-98
ref|NP_001054690.1| Os05g0155300 [Oryza sativa Japonica Group] g...   362   8e-98

>ref|XP_002264979.1| PREDICTED: nifU-like protein 4, mitochondrial-like [Vitis vinifera]
          Length = 271

 Score =  369 bits (948), Expect = e-100
 Identities = 192/255 (75%), Positives = 213/255 (83%), Gaps = 1/255 (0%)
 Frame = +2

Query: 122 EPIANPIEKNYLRSVRLFSS-SISAPLWKPAPFSPLNPGKPSFVAPWSGYLGQKRSMFIQ 298
           EP   P+    L    +FSS + ++ L  P   S     K S +  WS + GQ+R+MFIQ
Sbjct: 18  EPWRKPLMPRRL----IFSSFTTTSYLENPTSSSRFTSFKSSSLPKWSHFGGQRRTMFIQ 73

Query: 299 TQSTPNPLSLMFYPGKPVMEVGSADFPNARVAMNSHLAKSLFSIDGITRVFFGSDFVTVT 478
           TQSTPNP SLMFYPGKPVMEVGSADFPN+R AM+S LAKSL+ IDGITRVFFGSDF+TVT
Sbjct: 74  TQSTPNPASLMFYPGKPVMEVGSADFPNSRSAMSSPLAKSLYGIDGITRVFFGSDFITVT 133

Query: 479 KSEEATWDFLKPEIFAAIMDFYSSGKPLFLDSNVAASMDTAIKEDDSEIVAMIKELLETR 658
           KS++A+WDF+KPEIFAAIMDFYSSGKPLFLDSN AA+MDTAI EDDSE VAMIKELLETR
Sbjct: 134 KSDDASWDFIKPEIFAAIMDFYSSGKPLFLDSNTAAAMDTAIHEDDSETVAMIKELLETR 193

Query: 659 IRPAVQDDGGDIEYRGFDEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGV 838
           IRPAVQDDGGDIEYRGFD ETGIVKL+MQGACSGCPSSSVTLKSGIENMLMHYVPEVKGV
Sbjct: 194 IRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGV 253

Query: 839 EQELDNGDEVVSSAG 883
           EQELD  DE V+ +G
Sbjct: 254 EQELDAEDEDVALSG 268


>ref|XP_002439319.1| hypothetical protein SORBIDRAFT_09g004310 [Sorghum bicolor]
           gi|241944604|gb|EES17749.1| hypothetical protein
           SORBIDRAFT_09g004310 [Sorghum bicolor]
          Length = 268

 Score =  365 bits (938), Expect = 9e-99
 Identities = 190/242 (78%), Positives = 205/242 (84%), Gaps = 3/242 (1%)
 Frame = +2

Query: 167 RLFSSSISAPL--WKPAPFSPLNPGKPSFVAPWSGYLG-QKRSMFIQTQSTPNPLSLMFY 337
           R  SS+ S PL   K  PF+      P+   PW  + G QKR+MFIQTQSTPNP SLMFY
Sbjct: 29  RFLSSAASGPLDRLKSPPFARPGARNPA-AYPWDRFGGGQKRTMFIQTQSTPNPQSLMFY 87

Query: 338 PGKPVMEVGSADFPNARVAMNSHLAKSLFSIDGITRVFFGSDFVTVTKSEEATWDFLKPE 517
           PGKPVMEVGS+DFPNAR AM S LAK+LF+IDG+TR+FFGSDFVTVTKSEE +WD+LKPE
Sbjct: 88  PGKPVMEVGSSDFPNARTAMTSPLAKALFAIDGVTRIFFGSDFVTVTKSEETSWDYLKPE 147

Query: 518 IFAAIMDFYSSGKPLFLDSNVAASMDTAIKEDDSEIVAMIKELLETRIRPAVQDDGGDIE 697
           +FAAIMDFYSSG+PLFLDSN AASMDTAI EDDSEIVAMIKELLETRIRPAVQDDGGDIE
Sbjct: 148 VFAAIMDFYSSGQPLFLDSNAAASMDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIE 207

Query: 698 YRGFDEETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDNGDEVVSS 877
           YRGFD E GIVKL+MQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQE D GDE    
Sbjct: 208 YRGFDPENGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFD-GDEEAEL 266

Query: 878 AG 883
           AG
Sbjct: 267 AG 268


>gb|EAY96612.1| hypothetical protein OsI_18522 [Oryza sativa Indica Group]
          Length = 272

 Score =  364 bits (934), Expect = 3e-98
 Identities = 183/217 (84%), Positives = 197/217 (90%)
 Frame = +2

Query: 233 GKPSFVAPWSGYLGQKRSMFIQTQSTPNPLSLMFYPGKPVMEVGSADFPNARVAMNSHLA 412
           G P+ ++PWS + GQKR MFIQTQSTPNP SLMFYPGKPVMEVGS+DFPNAR AM S LA
Sbjct: 55  GSPA-LSPWSRFGGQKRGMFIQTQSTPNPQSLMFYPGKPVMEVGSSDFPNARTAMTSPLA 113

Query: 413 KSLFSIDGITRVFFGSDFVTVTKSEEATWDFLKPEIFAAIMDFYSSGKPLFLDSNVAASM 592
           K+LF+IDG+TRVFFGSDFVTVTKSEE +WD+LKPE+FAAIMDFYSSG+ LFLDS+ AASM
Sbjct: 114 KALFAIDGVTRVFFGSDFVTVTKSEETSWDYLKPEVFAAIMDFYSSGQSLFLDSSTAASM 173

Query: 593 DTAIKEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDEETGIVKLRMQGACSGCPSS 772
           DTAI EDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFD ETGIVKL+MQGACSGCPSS
Sbjct: 174 DTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSS 233

Query: 773 SVTLKSGIENMLMHYVPEVKGVEQELDNGDEVVSSAG 883
           SVTLKSGIENMLMHYVPEVKGVEQELD GDE     G
Sbjct: 234 SVTLKSGIENMLMHYVPEVKGVEQELD-GDEEAELTG 269


>ref|XP_003568893.1| PREDICTED: nifU-like protein 4, mitochondrial-like [Brachypodium
           distachyon]
          Length = 268

 Score =  362 bits (930), Expect = 8e-98
 Identities = 185/232 (79%), Positives = 200/232 (86%)
 Frame = +2

Query: 188 SAPLWKPAPFSPLNPGKPSFVAPWSGYLGQKRSMFIQTQSTPNPLSLMFYPGKPVMEVGS 367
           S P  +P+     NP  PS   PW    GQ+R+MFIQTQSTPNP SLMF+PGKPVMEVGS
Sbjct: 40  SPPFARPSALR--NPAPPS---PWDRLGGQRRTMFIQTQSTPNPQSLMFHPGKPVMEVGS 94

Query: 368 ADFPNARVAMNSHLAKSLFSIDGITRVFFGSDFVTVTKSEEATWDFLKPEIFAAIMDFYS 547
           +DFPN R AM S LAK+LF+IDG+TRVFFGSDFVTVTKS+E +WD+LKPEIFAAIMDFYS
Sbjct: 95  SDFPNVRTAMTSPLAKALFAIDGVTRVFFGSDFVTVTKSDETSWDYLKPEIFAAIMDFYS 154

Query: 548 SGKPLFLDSNVAASMDTAIKEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDEETGI 727
           SG+PLFLDSN AA+MDTAI EDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFD ETGI
Sbjct: 155 SGQPLFLDSNTAAAMDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGI 214

Query: 728 VKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDNGDEVVSSAG 883
           VKL+MQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQE D GDE    AG
Sbjct: 215 VKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFD-GDEEAELAG 265


>ref|NP_001054690.1| Os05g0155300 [Oryza sativa Japonica Group]
           gi|54291852|gb|AAV32220.1| unknown protein [Oryza sativa
           Japonica Group] gi|113578241|dbj|BAF16604.1|
           Os05g0155300 [Oryza sativa Japonica Group]
           gi|215697325|dbj|BAG91319.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222630253|gb|EEE62385.1| hypothetical protein
           OsJ_17174 [Oryza sativa Japonica Group]
          Length = 272

 Score =  362 bits (930), Expect = 8e-98
 Identities = 182/217 (83%), Positives = 196/217 (90%)
 Frame = +2

Query: 233 GKPSFVAPWSGYLGQKRSMFIQTQSTPNPLSLMFYPGKPVMEVGSADFPNARVAMNSHLA 412
           G P+ ++PWS + GQKR MFIQTQSTPNP SLMFYPGKPVMEVGS+DFPNAR AM S LA
Sbjct: 55  GSPA-LSPWSRFGGQKRGMFIQTQSTPNPQSLMFYPGKPVMEVGSSDFPNARTAMTSPLA 113

Query: 413 KSLFSIDGITRVFFGSDFVTVTKSEEATWDFLKPEIFAAIMDFYSSGKPLFLDSNVAASM 592
           K+LF+IDG+TRVFFGSDFVTVTKSEE +WD+LKPE+FA IMDFYSSG+ LFLDS+ AASM
Sbjct: 114 KALFAIDGVTRVFFGSDFVTVTKSEETSWDYLKPEVFAVIMDFYSSGQSLFLDSSTAASM 173

Query: 593 DTAIKEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDEETGIVKLRMQGACSGCPSS 772
           DTAI EDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFD ETGIVKL+MQGACSGCPSS
Sbjct: 174 DTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSS 233

Query: 773 SVTLKSGIENMLMHYVPEVKGVEQELDNGDEVVSSAG 883
           SVTLKSGIENMLMHYVPEVKGVEQELD GDE     G
Sbjct: 234 SVTLKSGIENMLMHYVPEVKGVEQELD-GDEEAELTG 269


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