BLASTX nr result

ID: Dioscorea21_contig00006965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006965
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234327.1| GRAS10 protein [Solanum lycopersicum] gi|894...    66   4e-17
ref|XP_003580377.1| PREDICTED: scarecrow-like protein 8-like [Br...    63   3e-15
ref|NP_001053646.1| Os04g0580300 [Oryza sativa Japonica Group] g...    61   1e-14
ref|NP_001047748.1| Os02g0681900 [Oryza sativa Japonica Group] g...    60   6e-14
gb|EAY87084.1| hypothetical protein OsI_08482 [Oryza sativa Indi...    60   6e-14

>ref|NP_001234327.1| GRAS10 protein [Solanum lycopersicum] gi|89474476|gb|ABD72965.1|
           GRAS10 [Solanum lycopersicum]
          Length = 631

 Score = 66.2 bits (160), Expect(2) = 4e-17
 Identities = 43/106 (40%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
 Frame = -1

Query: 545 SAITNNEWNDTIQQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------RQLLLDTA 384
           S ITNNEW++TIQ LI                             S      +Q +++ A
Sbjct: 211 SVITNNEWSETIQNLISPSQNQNQIQKLASLSPSSSTSSCASSTESPAISCPKQSIIEAA 270

Query: 383 NAISDGNLDTAAANLSQLKQAANLRGDPDQRLTAIMVSALVSRLNP 246
            AI DG  D A   L++L Q AN+RG  DQRLTA MV+AL SRLNP
Sbjct: 271 TAIYDGKNDVALEILTRLSQVANIRGSSDQRLTAYMVAALRSRLNP 316



 Score = 48.1 bits (113), Expect(2) = 4e-17
 Identities = 24/42 (57%), Positives = 28/42 (66%)
 Frame = -2

Query: 133 PFADLGSAEHLAGTAMLHEVSPVFKLSLLAANLAILDATRDH 8
           P  +L S EH   T  L+EVSP FKL  +AANLAIL+A  DH
Sbjct: 322 PVLELQSKEHTETTHNLYEVSPCFKLGFMAANLAILEAVADH 363


>ref|XP_003580377.1| PREDICTED: scarecrow-like protein 8-like [Brachypodium distachyon]
          Length = 631

 Score = 63.2 bits (152), Expect(2) = 3e-15
 Identities = 33/57 (57%), Positives = 44/57 (77%)
 Frame = -1

Query: 407 RQLLLDTANAISDGNLDTAAANLSQLKQAANLRGDPDQRLTAIMVSALVSRLNPSPS 237
           RQLL + A A++DGNL+TAAA+L+ LK A N RGD + RL A+MV+AL SR+ P+ S
Sbjct: 264 RQLLSEAAVAMADGNLETAAAHLATLKGAVNPRGDAEHRLLAMMVAALSSRIAPTAS 320



 Score = 44.7 bits (104), Expect(2) = 3e-15
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = -2

Query: 127 ADLGSAEHLAGTAMLHEVSPVFKLSLLAANLAILDATRD 11
           ADL  +EH  G+ +LH++SP F+ +L AAN+AI++A  D
Sbjct: 327 ADLCGSEHRTGSQLLHDISPCFRFALHAANIAIVEAVAD 365


>ref|NP_001053646.1| Os04g0580300 [Oryza sativa Japonica Group]
           gi|38345865|emb|CAE01834.2| OSJNBa0064M23.7 [Oryza
           sativa Japonica Group] gi|113565217|dbj|BAF15560.1|
           Os04g0580300 [Oryza sativa Japonica Group]
           gi|125549447|gb|EAY95269.1| hypothetical protein
           OsI_17092 [Oryza sativa Indica Group]
           gi|125591387|gb|EAZ31737.1| hypothetical protein
           OsJ_15890 [Oryza sativa Japonica Group]
           gi|215712409|dbj|BAG94536.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 619

 Score = 61.2 bits (147), Expect(2) = 1e-14
 Identities = 32/57 (56%), Positives = 44/57 (77%)
 Frame = -1

Query: 407 RQLLLDTANAISDGNLDTAAANLSQLKQAANLRGDPDQRLTAIMVSALVSRLNPSPS 237
           RQLL + A AI+DG+ +TAA +L+ LK+AAN RGD +QRL A+MV+AL SR+  + S
Sbjct: 262 RQLLSEAAAAIADGHNETAATHLTALKRAANSRGDVEQRLVAMMVAALSSRIGQTAS 318



 Score = 45.1 bits (105), Expect(2) = 1e-14
 Identities = 20/39 (51%), Positives = 29/39 (74%)
 Frame = -2

Query: 124 DLGSAEHLAGTAMLHEVSPVFKLSLLAANLAILDATRDH 8
           D+   E  AG+ +LH++SP F+L+L AAN+AI+DA  DH
Sbjct: 321 DICGGETRAGSQLLHDISPCFRLALHAANVAIVDAVGDH 359


>ref|NP_001047748.1| Os02g0681900 [Oryza sativa Japonica Group]
           gi|29367345|gb|AAO72545.1| scarecrow transcriptional
           regulator-like protein [Oryza sativa Japonica Group]
           gi|50251888|dbj|BAD27826.1| putative
           gibberellin-insensitive protein OsGAI [Oryza sativa
           Japonica Group] gi|113537279|dbj|BAF09662.1|
           Os02g0681900 [Oryza sativa Japonica Group]
           gi|125583262|gb|EAZ24193.1| hypothetical protein
           OsJ_07941 [Oryza sativa Japonica Group]
          Length = 618

 Score = 59.7 bits (143), Expect(2) = 6e-14
 Identities = 32/57 (56%), Positives = 41/57 (71%)
 Frame = -1

Query: 407 RQLLLDTANAISDGNLDTAAANLSQLKQAANLRGDPDQRLTAIMVSALVSRLNPSPS 237
           RQLL + A A++DGN   AA+ LS LK +AN RGD +QRL A+MV+AL SR+   PS
Sbjct: 254 RQLLSEAAAAVADGNHTAAASLLSALKLSANPRGDAEQRLVAMMVAALSSRVGTGPS 310



 Score = 43.9 bits (102), Expect(2) = 6e-14
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = -2

Query: 127 ADLGSAEHLAGTAMLHEVSPVFKLSLLAANLAILDATRDH 8
           ADL S EH A   +L +VSP F L+L  ANLAILDA   H
Sbjct: 314 ADLYSGEHRAACQLLQDVSPCFGLALHGANLAILDAVAGH 353


>gb|EAY87084.1| hypothetical protein OsI_08482 [Oryza sativa Indica Group]
          Length = 618

 Score = 59.7 bits (143), Expect(2) = 6e-14
 Identities = 32/57 (56%), Positives = 41/57 (71%)
 Frame = -1

Query: 407 RQLLLDTANAISDGNLDTAAANLSQLKQAANLRGDPDQRLTAIMVSALVSRLNPSPS 237
           RQLL + A A++DGN   AA+ LS LK +AN RGD +QRL A+MV+AL SR+   PS
Sbjct: 254 RQLLSEAAAAVADGNHTAAASLLSALKLSANPRGDAEQRLVAMMVAALSSRVGTGPS 310



 Score = 43.9 bits (102), Expect(2) = 6e-14
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = -2

Query: 127 ADLGSAEHLAGTAMLHEVSPVFKLSLLAANLAILDATRDH 8
           ADL S EH A   +L +VSP F L+L  ANLAILDA   H
Sbjct: 314 ADLYSGEHRAACQLLQDVSPCFGLALHGANLAILDAVAGH 353


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