BLASTX nr result

ID: Dioscorea21_contig00006960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006960
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001148608.1| NADH-ubiquinone oxidoreductase B16.6 subunit...   251   3e-64
ref|XP_003558610.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   248   2e-63
ref|XP_002465711.1| hypothetical protein SORBIDRAFT_01g044350 [S...   248   2e-63
ref|NP_001148415.1| NADH-ubiquinone oxidoreductase B16.6 subunit...   246   9e-63
ref|XP_004147172.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   245   1e-62

>ref|NP_001148608.1| NADH-ubiquinone oxidoreductase B16.6 subunit [Zea mays]
           gi|194700584|gb|ACF84376.1| unknown [Zea mays]
           gi|195620784|gb|ACG32222.1| NADH-ubiquinone
           oxidoreductase B16.6 subunit [Zea mays]
           gi|414865464|tpg|DAA44021.1| TPA: NADH-ubiquinone
           oxidoreductase B16.6 subunit [Zea mays]
          Length = 143

 Score =  251 bits (640), Expect = 3e-64
 Identities = 121/143 (84%), Positives = 132/143 (92%)
 Frame = -1

Query: 986 MTEAVVRNKPGMASVKEMPLLQDXXXXXXXXPVRFARRIPTTGPSAVAIFLTAFGAFAWG 807
           MTE++VRNKPGMAS+KEMP+LQD        PVR+ARRIPT+GPSA AIFLTAFGAFA+G
Sbjct: 1   MTESLVRNKPGMASIKEMPVLQDGPPPGGFAPVRYARRIPTSGPSATAIFLTAFGAFAYG 60

Query: 806 MYQVGKGNKIRRELKEEKYAARSAIVPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKV 627
           MYQVG+GNK+RR LKEEK AARSAI+PMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKV
Sbjct: 61  MYQVGQGNKVRRALKEEKIAARSAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKV 120

Query: 626 GENVYNSGKWMPPATGELRPEVW 558
           GE+VYNSGKWMPPATGELRPEVW
Sbjct: 121 GESVYNSGKWMPPATGELRPEVW 143


>ref|XP_003558610.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 13-B-like [Brachypodium distachyon]
          Length = 143

 Score =  248 bits (633), Expect = 2e-63
 Identities = 118/143 (82%), Positives = 131/143 (91%)
 Frame = -1

Query: 986 MTEAVVRNKPGMASVKEMPLLQDXXXXXXXXPVRFARRIPTTGPSAVAIFLTAFGAFAWG 807
           MTE++VRNKPGMASVK+MPLLQD        PVR+ARRIP+ GPSA+A+FLT FGAF+WG
Sbjct: 1   MTESLVRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPSKGPSAIALFLTTFGAFSWG 60

Query: 806 MYQVGKGNKIRRELKEEKYAARSAIVPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKV 627
           MYQVG+GNK+RR LKEEK AARSAI+PMLQAEEDERFVKEWKKYLEEEARIMK+VPGWKV
Sbjct: 61  MYQVGQGNKVRRALKEEKIAARSAILPMLQAEEDERFVKEWKKYLEEEARIMKNVPGWKV 120

Query: 626 GENVYNSGKWMPPATGELRPEVW 558
           GE+VYNSGKWMPPATGELRPEVW
Sbjct: 121 GESVYNSGKWMPPATGELRPEVW 143


>ref|XP_002465711.1| hypothetical protein SORBIDRAFT_01g044350 [Sorghum bicolor]
           gi|241919565|gb|EER92709.1| hypothetical protein
           SORBIDRAFT_01g044350 [Sorghum bicolor]
          Length = 143

 Score =  248 bits (633), Expect = 2e-63
 Identities = 119/143 (83%), Positives = 131/143 (91%)
 Frame = -1

Query: 986 MTEAVVRNKPGMASVKEMPLLQDXXXXXXXXPVRFARRIPTTGPSAVAIFLTAFGAFAWG 807
           MTE++VRNKPGMAS+KEMP++QD        PVR+ARRIPT+GPSA AIFLT FGAFA+G
Sbjct: 1   MTESLVRNKPGMASIKEMPVVQDGPPPGGFAPVRYARRIPTSGPSATAIFLTTFGAFAYG 60

Query: 806 MYQVGKGNKIRRELKEEKYAARSAIVPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKV 627
           MYQVG+GNK+RR LKEEK AARSAI+PMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKV
Sbjct: 61  MYQVGQGNKVRRALKEEKIAARSAILPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKV 120

Query: 626 GENVYNSGKWMPPATGELRPEVW 558
           GE+VYNSGKWMPPATGELRPEVW
Sbjct: 121 GESVYNSGKWMPPATGELRPEVW 143


>ref|NP_001148415.1| NADH-ubiquinone oxidoreductase B16.6 subunit [Zea mays]
           gi|226504900|ref|NP_001151782.1| NADH-ubiquinone
           oxidoreductase B16.6 subunit [Zea mays]
           gi|195619110|gb|ACG31385.1| NADH-ubiquinone
           oxidoreductase B16.6 subunit [Zea mays]
           gi|195620760|gb|ACG32210.1| NADH-ubiquinone
           oxidoreductase B16.6 subunit [Zea mays]
           gi|195628190|gb|ACG35925.1| NADH-ubiquinone
           oxidoreductase B16.6 subunit [Zea mays]
           gi|195649651|gb|ACG44293.1| NADH-ubiquinone
           oxidoreductase B16.6 subunit [Zea mays]
           gi|413956745|gb|AFW89394.1| NADH-ubiquinone
           oxidoreductase B16.6 subunit [Zea mays]
          Length = 143

 Score =  246 bits (627), Expect = 9e-63
 Identities = 119/143 (83%), Positives = 130/143 (90%)
 Frame = -1

Query: 986 MTEAVVRNKPGMASVKEMPLLQDXXXXXXXXPVRFARRIPTTGPSAVAIFLTAFGAFAWG 807
           MTE++VRNKPGMAS+KEMP++QD        PVRFARRIPT+GPSA AIFLT FGAFA+G
Sbjct: 1   MTESLVRNKPGMASIKEMPVVQDGPPPGGFAPVRFARRIPTSGPSATAIFLTTFGAFAYG 60

Query: 806 MYQVGKGNKIRRELKEEKYAARSAIVPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKV 627
           MYQVG+GNK+RR LKEEK AARSAI+PMLQAEEDERFVKEWKK LEEEARIMKDVPGWKV
Sbjct: 61  MYQVGQGNKVRRALKEEKIAARSAILPMLQAEEDERFVKEWKKCLEEEARIMKDVPGWKV 120

Query: 626 GENVYNSGKWMPPATGELRPEVW 558
           GE+VYNSGKWMPPATGELRPEVW
Sbjct: 121 GESVYNSGKWMPPATGELRPEVW 143


>ref|XP_004147172.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 13-B-like [Cucumis sativus]
           gi|449498576|ref|XP_004160575.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           13-B-like [Cucumis sativus]
          Length = 143

 Score =  245 bits (625), Expect = 1e-62
 Identities = 117/143 (81%), Positives = 127/143 (88%)
 Frame = -1

Query: 986 MTEAVVRNKPGMASVKEMPLLQDXXXXXXXXPVRFARRIPTTGPSAVAIFLTAFGAFAWG 807
           MTEA +R KPGMASVK+MP+LQD        PVR+ARRIPT GPSA+AIFLTAFGAF+WG
Sbjct: 1   MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGAFSWG 60

Query: 806 MYQVGKGNKIRRELKEEKYAARSAIVPMLQAEEDERFVKEWKKYLEEEARIMKDVPGWKV 627
           MYQVGKGNKIRR LKEEKYAAR AI+P+LQAEEDERFVKEWK YLE EA +MKDVPGWKV
Sbjct: 61  MYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKV 120

Query: 626 GENVYNSGKWMPPATGELRPEVW 558
           GE+VYNSGKWMPPATGELRPEVW
Sbjct: 121 GESVYNSGKWMPPATGELRPEVW 143


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