BLASTX nr result

ID: Dioscorea21_contig00006957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006957
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877532.1| hypothetical protein ARALYDRAFT_905922 [Arab...   261   6e-68
pdb|2P9O|A Chain A, Structure Of Dutpase From Arabidopsis Thalia...   260   1e-67
ref|NP_190278.1| dUTP pyrophosphatase [Arabidopsis thaliana] gi|...   260   1e-67
ref|XP_002303134.1| predicted protein [Populus trichocarpa] gi|1...   259   2e-67
ref|XP_002282840.1| PREDICTED: deoxyuridine 5'-triphosphate nucl...   257   9e-67

>ref|XP_002877532.1| hypothetical protein ARALYDRAFT_905922 [Arabidopsis lyrata subsp.
           lyrata] gi|297323370|gb|EFH53791.1| hypothetical protein
           ARALYDRAFT_905922 [Arabidopsis lyrata subsp. lyrata]
          Length = 178

 Score =  261 bits (666), Expect = 6e-68
 Identities = 132/167 (79%), Positives = 145/167 (86%)
 Frame = +3

Query: 6   ISLDAHESSPKLPKLSQNGITESRNLSPFLRIKKLSENAVMPTRASPLSAGYDLSSAVET 185
           IS   +E SPKL KL QNGI    + SPF ++KKLSE AV+PTR S LSAGYDLSSAV++
Sbjct: 12  ISDAVNEPSPKLQKLDQNGIHGDSSSSPFFKVKKLSEKAVLPTRGSSLSAGYDLSSAVDS 71

Query: 186 KVPARGKALVPTDLSIAIPNGTYARIAPRSGLTWKHSIDVGAGVIDADYRGPVGVILFNH 365
           KVPARGKAL+PTDLSIA+P GTYARIAPRSGL WKHSIDVGAGVIDADYRGPVGVILFNH
Sbjct: 72  KVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVILFNH 131

Query: 366 SDVDFTVKPGDRIAQMIIERILTPEVLEVEDLDATVRGAGGFGSTGV 506
           SDVDF VK GDRIAQ+IIE+I+TP V+EVEDLD TVRG GGFGSTGV
Sbjct: 132 SDVDFEVKFGDRIAQLIIEKIVTPVVVEVEDLDDTVRGDGGFGSTGV 178


>pdb|2P9O|A Chain A, Structure Of Dutpase From Arabidopsis Thaliana
           gi|167013262|pdb|2P9O|B Chain B, Structure Of Dutpase
           From Arabidopsis Thaliana gi|167013263|pdb|2P9O|C Chain
           C, Structure Of Dutpase From Arabidopsis Thaliana
           gi|167744878|pdb|2PC5|A Chain A, Native Crystal
           Structure Analysis On Arabidopsis Dutpase
           gi|167744879|pdb|2PC5|B Chain B, Native Crystal
           Structure Analysis On Arabidopsis Dutpase
           gi|167744880|pdb|2PC5|C Chain C, Native Crystal
           Structure Analysis On Arabidopsis Dutpase
          Length = 169

 Score =  260 bits (664), Expect = 1e-67
 Identities = 128/162 (79%), Positives = 144/162 (88%)
 Frame = +3

Query: 21  HESSPKLPKLSQNGITESRNLSPFLRIKKLSENAVMPTRASPLSAGYDLSSAVETKVPAR 200
           +E SPKL KL +NGI    + SPF ++KKLSE AV+PTR SPLSAGYDLSSAV++KVPAR
Sbjct: 8   NEPSPKLQKLDRNGIHGDSSPSPFFKVKKLSEKAVIPTRGSPLSAGYDLSSAVDSKVPAR 67

Query: 201 GKALVPTDLSIAIPNGTYARIAPRSGLTWKHSIDVGAGVIDADYRGPVGVILFNHSDVDF 380
           GKAL+PTDLSIA+P GTYARIAPRSGL WKHSIDVGAGVIDADYRGPVGVILFNHSD DF
Sbjct: 68  GKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDADF 127

Query: 381 TVKPGDRIAQMIIERILTPEVLEVEDLDATVRGAGGFGSTGV 506
            VK GDRIAQ+IIE+I+TP+V+EV+DLD TVRG GGFGSTGV
Sbjct: 128 EVKFGDRIAQLIIEKIVTPDVVEVDDLDETVRGDGGFGSTGV 169


>ref|NP_190278.1| dUTP pyrophosphatase [Arabidopsis thaliana]
           gi|75266320|sp|Q9STG6.1|DUT_ARATH RecName:
           Full=Deoxyuridine 5'-triphosphate nucleotidohydrolase;
           Short=dUTPase; AltName: Full=dUTP pyrophosphatase;
           AltName: Full=dUTP-pyrophosphatase-like 1; Short=AtDUT1
           gi|13878143|gb|AAK44149.1|AF370334_1 putative dUTP
           pyrophosphatase [Arabidopsis thaliana]
           gi|5541665|emb|CAB51171.1| dUTP pyrophosphatase-like
           protein [Arabidopsis thaliana]
           gi|17104549|gb|AAL34163.1| putative dUTP pyrophosphatase
           [Arabidopsis thaliana] gi|332644701|gb|AEE78222.1| dUTP
           pyrophosphatase [Arabidopsis thaliana]
          Length = 166

 Score =  260 bits (664), Expect = 1e-67
 Identities = 128/162 (79%), Positives = 144/162 (88%)
 Frame = +3

Query: 21  HESSPKLPKLSQNGITESRNLSPFLRIKKLSENAVMPTRASPLSAGYDLSSAVETKVPAR 200
           +E SPKL KL +NGI    + SPF ++KKLSE AV+PTR SPLSAGYDLSSAV++KVPAR
Sbjct: 5   NEPSPKLQKLDRNGIHGDSSPSPFFKVKKLSEKAVIPTRGSPLSAGYDLSSAVDSKVPAR 64

Query: 201 GKALVPTDLSIAIPNGTYARIAPRSGLTWKHSIDVGAGVIDADYRGPVGVILFNHSDVDF 380
           GKAL+PTDLSIA+P GTYARIAPRSGL WKHSIDVGAGVIDADYRGPVGVILFNHSD DF
Sbjct: 65  GKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDADF 124

Query: 381 TVKPGDRIAQMIIERILTPEVLEVEDLDATVRGAGGFGSTGV 506
            VK GDRIAQ+IIE+I+TP+V+EV+DLD TVRG GGFGSTGV
Sbjct: 125 EVKFGDRIAQLIIEKIVTPDVVEVDDLDETVRGDGGFGSTGV 166


>ref|XP_002303134.1| predicted protein [Populus trichocarpa] gi|118485217|gb|ABK94469.1|
           unknown [Populus trichocarpa]
           gi|222844860|gb|EEE82407.1| predicted protein [Populus
           trichocarpa]
          Length = 170

 Score =  259 bits (662), Expect = 2e-67
 Identities = 133/166 (80%), Positives = 144/166 (86%)
 Frame = +3

Query: 9   SLDAHESSPKLPKLSQNGITESRNLSPFLRIKKLSENAVMPTRASPLSAGYDLSSAVETK 188
           S D  E SPK+PKL  + I      S  LR+KKLSENAV+P+R SPLSAGYDLSSA + K
Sbjct: 10  SPDIKEPSPKVPKLQHDNIP-----SYLLRVKKLSENAVLPSRGSPLSAGYDLSSASKAK 64

Query: 189 VPARGKALVPTDLSIAIPNGTYARIAPRSGLTWKHSIDVGAGVIDADYRGPVGVILFNHS 368
           VPARGKAL+PTDLSIAIP GTYARIAPRSGLTWKHSIDVGAGVIDADYRGPVGVILFNHS
Sbjct: 65  VPARGKALIPTDLSIAIPEGTYARIAPRSGLTWKHSIDVGAGVIDADYRGPVGVILFNHS 124

Query: 369 DVDFTVKPGDRIAQMIIERILTPEVLEVEDLDATVRGAGGFGSTGV 506
           DVDF VK GDRIAQ+IIE+I+TP V+EVEDLDATVRGAGGFGSTGV
Sbjct: 125 DVDFEVKVGDRIAQLIIEKIVTPNVMEVEDLDATVRGAGGFGSTGV 170


>ref|XP_002282840.1| PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase-like
           [Vitis vinifera]
          Length = 242

 Score =  257 bits (656), Expect = 9e-67
 Identities = 130/167 (77%), Positives = 144/167 (86%), Gaps = 1/167 (0%)
 Frame = +3

Query: 9   SLDAHESSPKLPKLSQNGITESRNLS-PFLRIKKLSENAVMPTRASPLSAGYDLSSAVET 185
           S +  E +PKL KL QNG+++        LR+KKLSE AV+P+RASPLSAGYDLSSA ET
Sbjct: 76  SPEIEEPAPKLQKLHQNGVSQDSQCPLSLLRVKKLSERAVLPSRASPLSAGYDLSSATET 135

Query: 186 KVPARGKALVPTDLSIAIPNGTYARIAPRSGLTWKHSIDVGAGVIDADYRGPVGVILFNH 365
           KVPARGKALVPTDLSI IP GTYARIAPRSGL WK+SIDVGAGVIDADYRGPVGVILFNH
Sbjct: 136 KVPARGKALVPTDLSIGIPEGTYARIAPRSGLAWKYSIDVGAGVIDADYRGPVGVILFNH 195

Query: 366 SDVDFTVKPGDRIAQMIIERILTPEVLEVEDLDATVRGAGGFGSTGV 506
           SDVDF VK GDRIAQ+IIE+I+TPEV+EVEDLD+T RG GGFGSTGV
Sbjct: 196 SDVDFEVKVGDRIAQLIIEKIITPEVMEVEDLDSTERGVGGFGSTGV 242


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