BLASTX nr result

ID: Dioscorea21_contig00006919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006919
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   124   1e-26
emb|CBI20820.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm...   124   2e-26
ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor ...   116   5e-24
ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...   115   6e-24

>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
           vinifera]
          Length = 2024

 Score =  124 bits (312), Expect = 1e-26
 Identities = 66/144 (45%), Positives = 94/144 (65%), Gaps = 1/144 (0%)
 Frame = -1

Query: 482 LISKITATQANPNPRLIHALASMLEAXXXXXXXXXXXXSLNNGRASHLIGRLGSLVRETD 303
           L+ KIT++  NPNP ++HAL+S+LE             SLNNGRA+H+IGRLGSLVR+ D
Sbjct: 178 LMEKITSSPDNPNPSVLHALSSILETQESRYMEETGHSSLNNGRATHIIGRLGSLVRDND 237

Query: 302 EFYELISSKFLYDSRYXXXXXXXXXXXXXXXXXTWMFPHVFDD-AVLDNIKSWVMEDPVE 126
           +F+ELISSKFL +SRY                 T ++PHVF++  VL+NIK+WVM++   
Sbjct: 238 DFFELISSKFLSESRYSISVQAAAARLLLICSLTLVYPHVFEETVVLENIKNWVMDENAR 297

Query: 125 VSGDSSHCECESGRTKPTDAEMLQ 54
            SG+    + +SGR + +D+EML+
Sbjct: 298 FSGEDRSWKNDSGRKEASDSEMLR 321


>emb|CBI20820.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score =  124 bits (312), Expect = 1e-26
 Identities = 66/144 (45%), Positives = 94/144 (65%), Gaps = 1/144 (0%)
 Frame = -1

Query: 482 LISKITATQANPNPRLIHALASMLEAXXXXXXXXXXXXSLNNGRASHLIGRLGSLVRETD 303
           L+ KIT++  NPNP ++HAL+S+LE             SLNNGRA+H+IGRLGSLVR+ D
Sbjct: 44  LMEKITSSPDNPNPSVLHALSSILETQESRYMEETGHSSLNNGRATHIIGRLGSLVRDND 103

Query: 302 EFYELISSKFLYDSRYXXXXXXXXXXXXXXXXXTWMFPHVFDD-AVLDNIKSWVMEDPVE 126
           +F+ELISSKFL +SRY                 T ++PHVF++  VL+NIK+WVM++   
Sbjct: 104 DFFELISSKFLSESRYSISVQAAAARLLLICSLTLVYPHVFEETVVLENIKNWVMDENAR 163

Query: 125 VSGDSSHCECESGRTKPTDAEMLQ 54
            SG+    + +SGR + +D+EML+
Sbjct: 164 FSGEDRSWKNDSGRKEASDSEMLR 187


>ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis]
           gi|223532632|gb|EEF34418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1871

 Score =  124 bits (311), Expect = 2e-26
 Identities = 62/143 (43%), Positives = 94/143 (65%)
 Frame = -1

Query: 482 LISKITATQANPNPRLIHALASMLEAXXXXXXXXXXXXSLNNGRASHLIGRLGSLVRETD 303
           L+ +IT++  NPNP ++HAL+S+LEA            S NN RASH IGRLG+LVRE D
Sbjct: 55  LMDRITSSPDNPNPTVLHALSSLLEAQESLYMEKNGYSSFNNSRASHNIGRLGNLVREND 114

Query: 302 EFYELISSKFLYDSRYXXXXXXXXXXXXXXXXXTWMFPHVFDDAVLDNIKSWVMEDPVEV 123
           EF++LIS+KFL ++RY                 TW++PHVF++ V++NIK+WVM++    
Sbjct: 115 EFFDLISTKFLSETRYSTSVQAAAARLLMSCSLTWIYPHVFEEPVIENIKNWVMDETAR- 173

Query: 122 SGDSSHCECESGRTKPTDAEMLQ 54
           SG+  H + ++G+ + +D+EML+
Sbjct: 174 SGEERHWKHDTGKKEASDSEMLK 196


>ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Cucumis
           sativus]
          Length = 1915

 Score =  116 bits (290), Expect = 5e-24
 Identities = 63/143 (44%), Positives = 87/143 (60%)
 Frame = -1

Query: 482 LISKITATQANPNPRLIHALASMLEAXXXXXXXXXXXXSLNNGRASHLIGRLGSLVRETD 303
           L+ K+TA+  NPNP  +HALA++LE             S +NGR SH IGRLG+++RE D
Sbjct: 58  LMDKVTASYDNPNPTFLHALATLLETQESRYMAENGHSS-SNGRGSHSIGRLGNVLREND 116

Query: 302 EFYELISSKFLYDSRYXXXXXXXXXXXXXXXXXTWMFPHVFDDAVLDNIKSWVMEDPVEV 123
           EF+ELISSKFL D+RY                 TW +PHVF++ VL+NIK WVME+  + 
Sbjct: 117 EFFELISSKFLSDTRYSSSIQAAAARLLLSCSLTWTYPHVFEEDVLENIKKWVMEEAGKS 176

Query: 122 SGDSSHCECESGRTKPTDAEMLQ 54
           S +  + + E G    +D+EML+
Sbjct: 177 SAEDRNWKPELGGKDVSDSEMLK 199


>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
           max]
          Length = 1868

 Score =  115 bits (289), Expect = 6e-24
 Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 1/144 (0%)
 Frame = -1

Query: 482 LISKITATQANPNPRLIHALASMLEAXXXXXXXXXXXXSLNNGRASHLIGRLGSLVRETD 303
           L+ KIT+   NPN  ++HALAS+LEA            S +  RA+H+IGRLG L+RE D
Sbjct: 32  LMEKITSAPDNPNATVLHALASILEAQESRYMEENGHSSSSTARAAHIIGRLGGLIREND 91

Query: 302 EFYELISSKFLYDSRYXXXXXXXXXXXXXXXXXTWMFPHVFDDAVLDNIKSWVMEDPVEV 123
           EF+ELISSKFL ++RY                 TW++PHVF+++V++NIK+WVM+D   +
Sbjct: 92  EFFELISSKFLLETRYSTSIQAASGRLLLCCSLTWIYPHVFEESVMENIKNWVMDDNTGL 151

Query: 122 SGDSSHCECESGRTK-PTDAEMLQ 54
             +  +     GR++  +D+EML+
Sbjct: 152 PAEEQNLRHNPGRSEAASDSEMLK 175


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