BLASTX nr result

ID: Dioscorea21_contig00006879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006879
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466370.1| hypothetical protein SORBIDRAFT_01g006540 [S...   322   8e-86
ref|XP_002282654.1| PREDICTED: uncharacterized protein At1g01500...   320   4e-85
ref|NP_001051432.1| Os03g0775600 [Oryza sativa Japonica Group] g...   315   1e-83
ref|XP_003558612.1| PREDICTED: uncharacterized protein At1g01500...   313   5e-83
ref|XP_002313048.1| predicted protein [Populus trichocarpa] gi|2...   309   7e-82

>ref|XP_002466370.1| hypothetical protein SORBIDRAFT_01g006540 [Sorghum bicolor]
           gi|241920224|gb|EER93368.1| hypothetical protein
           SORBIDRAFT_01g006540 [Sorghum bicolor]
          Length = 303

 Score =  322 bits (825), Expect = 8e-86
 Identities = 156/249 (62%), Positives = 207/249 (83%), Gaps = 1/249 (0%)
 Frame = +1

Query: 160 RKIIMHPLYLPRSSPWFELRVFYVRLSNCEVDDYTPEHLTLNHIPLTPDTICEMNGKRSG 339
           RKIIMHPLY PRSSPW +L+VFY+R+SNC VD+  P+HLTLNHIPL+PDT+ E+NG+RS 
Sbjct: 11  RKIIMHPLYAPRSSPWLDLKVFYIRVSNCVVDESAPDHLTLNHIPLSPDTVIEVNGQRSS 70

Query: 340 IYSDCVSSSLRRDRVDKKSDDATFVSTDSLRITGSVRFEVYDKDDLLLCGVLELCNGNGY 519
           ++++ +SSSLRRDRVDK++++ATFVSTD++R+TGSVRF+V+DK+DLLL G L+LCN NG 
Sbjct: 71  MHTEFISSSLRRDRVDKRTEEATFVSTDNIRMTGSVRFQVFDKNDLLLTGDLDLCNANGV 130

Query: 520 VKESKNHSKKWNMKCQSSVSPGSSFLKGKQYMTADVLSPTIEVYVAGSFSGTPIILTKTL 699
           V ESK+ SKKWNMKCQSS S  + FLKGK    ++ + P IEVYVAG+FSGTPIILTKT+
Sbjct: 131 VGESKSSSKKWNMKCQSSTS-CNGFLKGKLSNGSEYVQPMIEVYVAGTFSGTPIILTKTI 189

Query: 700 QLGFRKKHQMKVMLDCIPEYECITDKKKESPFEDPLQLSEYRDYKTENDIDMDYNSIYSR 879
           QL  R+K +MK+ LD IPE E  T+++KE   ED  ++SE++D K+E D+D+DYNS+YSR
Sbjct: 190 QLISRRKSEMKLKLDSIPENEA-TEQQKEESAEDTSKVSEFQDSKSETDVDVDYNSLYSR 248

Query: 880 AEYID-EDG 903
            ++++ EDG
Sbjct: 249 QDFLEGEDG 257


>ref|XP_002282654.1| PREDICTED: uncharacterized protein At1g01500-like [Vitis vinifera]
          Length = 308

 Score =  320 bits (819), Expect = 4e-85
 Identities = 161/266 (60%), Positives = 208/266 (78%), Gaps = 1/266 (0%)
 Frame = +1

Query: 109 MERSYDSVTDDDSPNPGRKIIMHPLYLPRSSPWFELRVFYVRLSNCEVDDYTPEHLTLNH 288
           ME SY++V +D+  NPG +II +  Y   SSPWF+LRVFYVR+SN EVDD TPE+LTLNH
Sbjct: 1   MESSYEAVRNDEPANPGLQIIRYTPYQSWSSPWFDLRVFYVRISNFEVDDSTPEYLTLNH 60

Query: 289 IPLTPDTICEMNGKRSGIYSDCVSSSLRRDRVDKKSDDATFVSTDSLRITGSVRFEVYDK 468
           IPL+PDT+ E+NG RS I+SD VSS LRRDRVDKKS++ATFVSTDS+R+TGSV+FEV+DK
Sbjct: 61  IPLSPDTLLEVNGTRSSIFSDGVSSLLRRDRVDKKSEEATFVSTDSIRLTGSVKFEVFDK 120

Query: 469 DDLLLCGVLELCNGNGYVKESKNHSKKWNMKCQSSVSPGSSFLKGKQYMTADVLSPTIEV 648
           +DL+L G LE+ N NG++ ESK ++K+W+M C+S ++ G++FLKGKQ + +++  PTIEV
Sbjct: 121 EDLILSGALEMSNSNGFIGESKTNAKQWSMNCESEITAGTAFLKGKQIVGSELPPPTIEV 180

Query: 649 YVAGSFSGTPIILTKTLQLGFRKKHQMKVMLDCIPEYECITDKKKESPFEDPLQLSEYRD 828
           YVAG FSGTPIILTKTLQL FRKKH  K  LD IPEYE  T+ +K  P    LQ+SEY +
Sbjct: 181 YVAGCFSGTPIILTKTLQLSFRKKHNRKGALDSIPEYE-TTECQKNVPSSLDLQMSEYTN 239

Query: 829 YKTENDIDMDYNSIYSRAEYID-EDG 903
           YK E++ D  Y   + R E+++ EDG
Sbjct: 240 YKPESEEDYMY---WRRTEFMEGEDG 262


>ref|NP_001051432.1| Os03g0775600 [Oryza sativa Japonica Group]
           gi|108711331|gb|ABF99126.1| dehydrogenase, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113549903|dbj|BAF13346.1| Os03g0775600 [Oryza sativa
           Japonica Group] gi|215694902|dbj|BAG90093.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218193834|gb|EEC76261.1| hypothetical protein
           OsI_13714 [Oryza sativa Indica Group]
           gi|222625890|gb|EEE60022.1| hypothetical protein
           OsJ_12775 [Oryza sativa Japonica Group]
          Length = 303

 Score =  315 bits (806), Expect = 1e-83
 Identities = 157/259 (60%), Positives = 207/259 (79%), Gaps = 1/259 (0%)
 Frame = +1

Query: 130 VTDDDSPNPGRKIIMHPLYLPRSSPWFELRVFYVRLSNCEVDDYTPEHLTLNHIPLTPDT 309
           + D+ +    RKIIMHPLY PRSSPW +L+VFYVR+SNCEVD+  P+ LTLNHIPL+PDT
Sbjct: 1   MADEVAFETARKIIMHPLYTPRSSPWLDLKVFYVRVSNCEVDESAPDRLTLNHIPLSPDT 60

Query: 310 ICEMNGKRSGIYSDCVSSSLRRDRVDKKSDDATFVSTDSLRITGSVRFEVYDKDDLLLCG 489
           + E+NG+RS ++++ +SSSLRRDRVDK +++ATFVSTDS+R+TGSVRF+V+DK+DLLL G
Sbjct: 61  VIEVNGQRSSMHTEFISSSLRRDRVDKMTEEATFVSTDSIRMTGSVRFQVFDKNDLLLTG 120

Query: 490 VLELCNGNGYVKESKNHSKKWNMKCQSSVSPGSSFLKGKQYMTADVLSPTIEVYVAGSFS 669
            LELC+ NG V ESKN SK+WNMKCQ + S  + FLKGK    ++ + P IEVY+AG+F 
Sbjct: 121 DLELCSANGVVGESKNSSKRWNMKCQPA-SSCNGFLKGKPSTASESVHPVIEVYLAGTFC 179

Query: 670 GTPIILTKTLQLGFRKKHQMKVMLDCIPEYECITDKKKESPFEDPLQLSEYRDYKTENDI 849
           GTPIILTKT+Q   R+K QMK+ LD IPE E  T+++KE   ED LQ+SE ++ K+E D+
Sbjct: 180 GTPIILTKTVQHISRRKSQMKLKLDSIPENEA-TEQQKEELNEDSLQVSESQNPKSEQDV 238

Query: 850 DMDYNSIYSRAEYID-EDG 903
           D+DYNS+YSR ++I+ EDG
Sbjct: 239 DVDYNSLYSRQDFIEGEDG 257


>ref|XP_003558612.1| PREDICTED: uncharacterized protein At1g01500-like [Brachypodium
           distachyon]
          Length = 302

 Score =  313 bits (801), Expect = 5e-83
 Identities = 153/249 (61%), Positives = 200/249 (80%), Gaps = 1/249 (0%)
 Frame = +1

Query: 160 RKIIMHPLYLPRSSPWFELRVFYVRLSNCEVDDYTPEHLTLNHIPLTPDTICEMNGKRSG 339
           RKIIMHPLY  RSSPW +L+VFYVR+SNC VD+  PE LTLNHIPL+PDT+ E+NG+RS 
Sbjct: 11  RKIIMHPLYASRSSPWLDLKVFYVRVSNCVVDESAPERLTLNHIPLSPDTVIEVNGRRSS 70

Query: 340 IYSDCVSSSLRRDRVDKKSDDATFVSTDSLRITGSVRFEVYDKDDLLLCGVLELCNGNGY 519
           ++++ +SSSLRRDR+D K+++AT+VSTDS+R+TGSVRF+V+DK+DLLL G LELCN NG 
Sbjct: 71  MHTEFISSSLRRDRIDTKTEEATYVSTDSIRMTGSVRFQVFDKNDLLLTGDLELCNANGV 130

Query: 520 VKESKNHSKKWNMKCQSSVSPGSSFLKGKQYMTADVLSPTIEVYVAGSFSGTPIILTKTL 699
           V ESKN S+ WN+KCQSS S  S FLKGK     D + P +EVYVAG+FSGTPIILTKT+
Sbjct: 131 VGESKNSSRNWNIKCQSSAS-SSGFLKGKMSTGPDSVHPVVEVYVAGTFSGTPIILTKTI 189

Query: 700 QLGFRKKHQMKVMLDCIPEYECITDKKKESPFEDPLQLSEYRDYKTENDIDMDYNSIYSR 879
           Q   R+K QMK+ LD IPE E    ++KE+   D L++SE++D K++ D+D+DYNS+YSR
Sbjct: 190 QFISRRKSQMKLKLDSIPENE--ATEQKENLHRDSLKVSEFQDPKSDTDVDVDYNSLYSR 247

Query: 880 AEYID-EDG 903
            ++++ EDG
Sbjct: 248 HDFLEGEDG 256


>ref|XP_002313048.1| predicted protein [Populus trichocarpa] gi|222849456|gb|EEE87003.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  309 bits (791), Expect = 7e-82
 Identities = 156/266 (58%), Positives = 200/266 (75%), Gaps = 1/266 (0%)
 Frame = +1

Query: 109 MERSYDSVTDDDSPNPGRKIIMHPLYLPRSSPWFELRVFYVRLSNCEVDDYTPEHLTLNH 288
           ME SY++   +     G  ++    + PRS PW +LRVFYVR+S CE+DD TPEHL++N+
Sbjct: 3   MENSYETSNGNGLRENGHAVVRQTPHQPRSLPWLDLRVFYVRISRCEIDDSTPEHLSVNY 62

Query: 289 IPLTPDTICEMNGKRSGIYSDCVSSSLRRDRVDKKSDDATFVSTDSLRITGSVRFEVYDK 468
           IPL PDT+ E+NG R+ I SD  S++LRRDR+DKKS++ATFVSTDS+R+TGSVRFEV+DK
Sbjct: 63  IPLYPDTLLEVNGVRTSINSDGASTTLRRDRLDKKSEEATFVSTDSIRMTGSVRFEVFDK 122

Query: 469 DDLLLCGVLELCNGNGYVKESKNHSKKWNMKCQSSVSPGSSFLKGKQYMTADVLSPTIEV 648
           D L+L GVLELC  NG+V ES+NH ++W+M C+S ++ G+ FLK KQ+M  D   PTIEV
Sbjct: 123 DVLVLSGVLELCCSNGFVGESRNHDQRWSMNCESDITLGNGFLKDKQFMGPDSEMPTIEV 182

Query: 649 YVAGSFSGTPIILTKTLQLGFRKKHQMKVMLDCIPEYECITDKKKESPFEDPLQLSEYRD 828
           YV GSFSGTPIILTKTLQLGFRKK   K MLD IPEYE  T+ + ++P   PLQLSEY D
Sbjct: 183 YVTGSFSGTPIILTKTLQLGFRKKQMRKGMLDSIPEYEA-TESQDKAPSRFPLQLSEYSD 241

Query: 829 YKTENDIDMDYNSIYSRAEYID-EDG 903
           +K EN+   DY+ ++   EY+D EDG
Sbjct: 242 HKPENE---DYH-LFPGTEYMDGEDG 263


Top