BLASTX nr result

ID: Dioscorea21_contig00006797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006797
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520011.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
dbj|BAC99788.1| WD-40 repeat protein-like [Oryza sativa Japonica...    64   1e-08
ref|NP_001061055.1| Os08g0162100 [Oryza sativa Japonica Group] g...    64   1e-08
ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera] ...    63   2e-08
ref|XP_002443908.1| hypothetical protein SORBIDRAFT_07g004180 [S...    63   3e-08

>ref|XP_002520011.1| conserved hypothetical protein [Ricinus communis]
            gi|223540775|gb|EEF42335.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1137

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = -3

Query: 239  KVQFHNDQTHLLVVHESQLAIYDSKLECLRS 147
            KVQFHNDQTHLLVVHESQ+AIYDSKLECLRS
Sbjct: 980  KVQFHNDQTHLLVVHESQIAIYDSKLECLRS 1010


>dbj|BAC99788.1| WD-40 repeat protein-like [Oryza sativa Japonica Group]
            gi|125602281|gb|EAZ41606.1| hypothetical protein
            OsJ_26138 [Oryza sativa Japonica Group]
          Length = 1150

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -3

Query: 239  KVQFHNDQTHLLVVHESQLAIYDSKLECLRSCS 141
            +VQFHNDQTH+LVVHESQLAIYD+KLECLRS S
Sbjct: 996  RVQFHNDQTHILVVHESQLAIYDAKLECLRSWS 1028


>ref|NP_001061055.1| Os08g0162100 [Oryza sativa Japonica Group]
            gi|113623024|dbj|BAF22969.1| Os08g0162100 [Oryza sativa
            Japonica Group] gi|125560238|gb|EAZ05686.1| hypothetical
            protein OsI_27917 [Oryza sativa Indica Group]
            gi|371501278|dbj|BAL44266.1| ASP1 protein [Oryza sativa
            Japonica Group]
          Length = 1133

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -3

Query: 239  KVQFHNDQTHLLVVHESQLAIYDSKLECLRSCS 141
            +VQFHNDQTH+LVVHESQLAIYD+KLECLRS S
Sbjct: 979  RVQFHNDQTHILVVHESQLAIYDAKLECLRSWS 1011


>ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera]
            gi|297737353|emb|CBI26554.3| unnamed protein product
            [Vitis vinifera]
          Length = 1135

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = -3

Query: 239  KVQFHNDQTHLLVVHESQLAIYDSKLECLRSCS 141
            KVQFHNDQ HLLVVHESQ+A+YDSKLEC+RS S
Sbjct: 978  KVQFHNDQAHLLVVHESQIAVYDSKLECVRSWS 1010


>ref|XP_002443908.1| hypothetical protein SORBIDRAFT_07g004180 [Sorghum bicolor]
            gi|241940258|gb|EES13403.1| hypothetical protein
            SORBIDRAFT_07g004180 [Sorghum bicolor]
          Length = 1136

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = -3

Query: 239  KVQFHNDQTHLLVVHESQLAIYDSKLECLRSCS 141
            +VQFHNDQTHLLVVHESQLAIYD  LECLRS S
Sbjct: 976  RVQFHNDQTHLLVVHESQLAIYDGNLECLRSWS 1008


Top