BLASTX nr result

ID: Dioscorea21_contig00006788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006788
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA42471.1| TPA: putative vesicle-associated membrane protei...   176   4e-42
ref|XP_002304708.1| predicted protein [Populus trichocarpa] gi|2...   175   9e-42
ref|NP_001059109.1| Os07g0194000 [Oryza sativa Japonica Group] g...   171   1e-40
tpg|DAA42470.1| TPA: putative vesicle-associated membrane protei...   170   3e-40
gb|ACG34366.1| vesicle-associated membrane protein 725 [Zea mays]     170   3e-40

>tpg|DAA42471.1| TPA: putative vesicle-associated membrane protein family protein
           [Zea mays]
          Length = 189

 Score =  176 bits (446), Expect = 4e-42
 Identities = 95/160 (59%), Positives = 103/160 (64%)
 Frame = -1

Query: 715 DGHTFNYLVEDGFTYCVVAVESAGRQVPIAFLERIKEDFNKRYGGGKAATAAANSLNREF 536
           DGHTFNYLVEDGFTYCVVAVES GRQ+PIAFL+R+KEDF K+YGGGKAATAAANSLNREF
Sbjct: 51  DGHTFNYLVEDGFTYCVVAVESVGRQIPIAFLDRVKEDFTKKYGGGKAATAAANSLNREF 110

Query: 535 GSKLKEHMQYCIDHPEEISKLAKVKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 356
           GSKLKEHMQYC+DHPEE+SKLAKVKA                                  
Sbjct: 111 GSKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLDRGEKIE---------- 160

Query: 355 XXXXXXXXXXWLIRQKTFALRHRISDSREPR*GERCGYKT 236
                      L+  KT  LR +IS SR PR G RCG KT
Sbjct: 161 -----------LLVDKTENLRSQISGSRAPRCGGRCGSKT 189


>ref|XP_002304708.1| predicted protein [Populus trichocarpa] gi|222842140|gb|EEE79687.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  175 bits (443), Expect = 9e-42
 Identities = 82/86 (95%), Positives = 85/86 (98%)
 Frame = -1

Query: 715 DGHTFNYLVEDGFTYCVVAVESAGRQVPIAFLERIKEDFNKRYGGGKAATAAANSLNREF 536
           DGHTFNYLVEDGFTYCVVAVESAGRQ+PIAFLER+KEDFNKRYGGGKAATA ANSLNREF
Sbjct: 51  DGHTFNYLVEDGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNREF 110

Query: 535 GSKLKEHMQYCIDHPEEISKLAKVKA 458
           GSKLKEHMQYC+DHPEEISKLAKVKA
Sbjct: 111 GSKLKEHMQYCVDHPEEISKLAKVKA 136



 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 38/57 (66%), Positives = 40/57 (70%)
 Frame = -3

Query: 323 VDKTENLRSQAQDFRQQGTKMRRKMWLQNMKXXXXXXXXXXXXXXXXXLSVCHGFHC 153
           VDKTENLRSQAQDFRQQGTKMRRKMW+QNMK                 LSVCHGF+C
Sbjct: 163 VDKTENLRSQAQDFRQQGTKMRRKMWIQNMKMKLIVLGIIIALILIIVLSVCHGFNC 219


>ref|NP_001059109.1| Os07g0194000 [Oryza sativa Japonica Group]
           gi|50509098|dbj|BAD30158.1| synaptobrevin-like protein
           [Oryza sativa Japonica Group]
           gi|60543737|emb|CAD70274.1| synaptobrevin 1 [Oryza
           sativa Japonica Group] gi|113610645|dbj|BAF21023.1|
           Os07g0194000 [Oryza sativa Japonica Group]
           gi|215686351|dbj|BAG87612.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215708711|dbj|BAG93980.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737736|dbj|BAG96866.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 220

 Score =  171 bits (434), Expect = 1e-40
 Identities = 80/86 (93%), Positives = 84/86 (97%)
 Frame = -1

Query: 715 DGHTFNYLVEDGFTYCVVAVESAGRQVPIAFLERIKEDFNKRYGGGKAATAAANSLNREF 536
           DGHTFNYLVEDGFTYCVVAVES GRQ+PIAFL+R+KEDF KRYGGGKAATAAANSLNREF
Sbjct: 51  DGHTFNYLVEDGFTYCVVAVESVGRQIPIAFLDRVKEDFTKRYGGGKAATAAANSLNREF 110

Query: 535 GSKLKEHMQYCIDHPEEISKLAKVKA 458
           GSKLKEHMQYC+DHPEEISKLAKVKA
Sbjct: 111 GSKLKEHMQYCVDHPEEISKLAKVKA 136



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 39/58 (67%), Positives = 40/58 (68%)
 Frame = -3

Query: 323 VDKTENLRSQAQDFRQQGTKMRRKMWLQNMKXXXXXXXXXXXXXXXXXLSVCHGFHCK 150
           VDKTENLRSQAQDFRQQGTK+RRKMWLQNMK                 LSVCHGF CK
Sbjct: 163 VDKTENLRSQAQDFRQQGTKVRRKMWLQNMKIKLIVLGIIIALILIIILSVCHGFKCK 220


>tpg|DAA42470.1| TPA: putative vesicle-associated membrane protein family protein
           [Zea mays]
          Length = 176

 Score =  170 bits (430), Expect = 3e-40
 Identities = 78/86 (90%), Positives = 84/86 (97%)
 Frame = -1

Query: 715 DGHTFNYLVEDGFTYCVVAVESAGRQVPIAFLERIKEDFNKRYGGGKAATAAANSLNREF 536
           DGHTFNYLVEDGFTYCVVAVES GRQ+PIAFL+R+KEDF K+YGGGKAATAAANSLNREF
Sbjct: 51  DGHTFNYLVEDGFTYCVVAVESVGRQIPIAFLDRVKEDFTKKYGGGKAATAAANSLNREF 110

Query: 535 GSKLKEHMQYCIDHPEEISKLAKVKA 458
           GSKLKEHMQYC+DHPEE+SKLAKVKA
Sbjct: 111 GSKLKEHMQYCVDHPEEVSKLAKVKA 136


>gb|ACG34366.1| vesicle-associated membrane protein 725 [Zea mays]
          Length = 304

 Score =  170 bits (430), Expect = 3e-40
 Identities = 78/86 (90%), Positives = 84/86 (97%)
 Frame = -1

Query: 715 DGHTFNYLVEDGFTYCVVAVESAGRQVPIAFLERIKEDFNKRYGGGKAATAAANSLNREF 536
           DGHTFNYLVEDGFTYCVVAVES GRQ+PIAFL+R+KEDF K+YGGGKAATAAANSLNREF
Sbjct: 51  DGHTFNYLVEDGFTYCVVAVESVGRQIPIAFLDRVKEDFTKKYGGGKAATAAANSLNREF 110

Query: 535 GSKLKEHMQYCIDHPEEISKLAKVKA 458
           GSKLKEHMQYC+DHPEE+SKLAKVKA
Sbjct: 111 GSKLKEHMQYCVDHPEEVSKLAKVKA 136



 Score = 39.7 bits (91), Expect(2) = 1e-06
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = -3

Query: 323 VDKTENLRSQAQDFRQQG 270
           VDKTENLRSQAQDFRQQG
Sbjct: 163 VDKTENLRSQAQDFRQQG 180



 Score = 38.9 bits (89), Expect(2) = 1e-06
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = -2

Query: 285 FPTAGNQDEEKDVATKHED*VDCPGHYHCSDSDYNLVCVPW 163
           F   G+Q   +DVA KHED  D  GH+H +   ++ V VPW
Sbjct: 176 FRQQGHQGAAEDVAPKHEDQADRAGHHHRAHPHHHPVGVPW 216


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