BLASTX nr result

ID: Dioscorea21_contig00006767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006767
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272465.2| PREDICTED: protein SCARECROW-like [Vitis vin...   116   2e-24
emb|CAN60709.1| hypothetical protein VITISV_027284 [Vitis vinifera]   114   6e-24
ref|XP_002306863.1| GRAS family transcription factor [Populus tr...   114   1e-23
ref|XP_002302035.1| GRAS family transcription factor [Populus tr...   114   1e-23
ref|XP_002529844.1| DELLA protein GAIP, putative [Ricinus commun...   107   1e-21

>ref|XP_002272465.2| PREDICTED: protein SCARECROW-like [Vitis vinifera]
          Length = 487

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/79 (73%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
 Frame = -2

Query: 249 MAIGGPARSGEDKFVSWRMELAQRG-FLPVPMSSNAMAQAQLILNMFPASLGHMILQGDD 73
           MAIGGPARSGEDKF  WR E+A R  F+ VPMS NAMAQAQLILNMFP + G+ ++QG +
Sbjct: 405 MAIGGPARSGEDKFRQWRSEMAARNCFVQVPMSGNAMAQAQLILNMFPPAHGYSLVQG-E 463

Query: 72  GTLRLGWKETGLYTASAWT 16
           GTLRLGWK+TGLY+ASAWT
Sbjct: 464 GTLRLGWKDTGLYSASAWT 482


>emb|CAN60709.1| hypothetical protein VITISV_027284 [Vitis vinifera]
          Length = 487

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/79 (72%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
 Frame = -2

Query: 249 MAIGGPARSGEDKFVSWRMELAQRG-FLPVPMSSNAMAQAQLILNMFPASLGHMILQGDD 73
           MAIGGPARSGEDKF  WR E+A R  F+ VPMS NAMAQAQLILNMFP + G+ +++G +
Sbjct: 405 MAIGGPARSGEDKFRQWRSEMAARNCFVQVPMSGNAMAQAQLILNMFPPAHGYSLVKG-E 463

Query: 72  GTLRLGWKETGLYTASAWT 16
           GTLRLGWK+TGLY+ASAWT
Sbjct: 464 GTLRLGWKDTGLYSASAWT 482


>ref|XP_002306863.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222856312|gb|EEE93859.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 519

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/78 (70%), Positives = 65/78 (83%)
 Frame = -2

Query: 249 MAIGGPARSGEDKFVSWRMELAQRGFLPVPMSSNAMAQAQLILNMFPASLGHMILQGDDG 70
           +AIGGPARSGEDKF  WR ELA+  F+ VPMS N+MAQAQLILNMFP + G+ + QG +G
Sbjct: 433 LAIGGPARSGEDKFRQWRSELARSSFMQVPMSGNSMAQAQLILNMFPPAHGYNLEQG-EG 491

Query: 69  TLRLGWKETGLYTASAWT 16
           TLRLGWK+T L+TASAWT
Sbjct: 492 TLRLGWKDTSLFTASAWT 509


>ref|XP_002302035.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222843761|gb|EEE81308.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 512

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/78 (70%), Positives = 65/78 (83%)
 Frame = -2

Query: 249 MAIGGPARSGEDKFVSWRMELAQRGFLPVPMSSNAMAQAQLILNMFPASLGHMILQGDDG 70
           +AIGGPARSGEDKF  WR ELA+  F+ V MS N+MAQAQLILNMFP + G+ ++QG DG
Sbjct: 431 LAIGGPARSGEDKFRHWRSELAKNSFMQVAMSGNSMAQAQLILNMFPPAHGYNLVQG-DG 489

Query: 69  TLRLGWKETGLYTASAWT 16
           TLRLGWK+T L+TASAWT
Sbjct: 490 TLRLGWKDTSLFTASAWT 507


>ref|XP_002529844.1| DELLA protein GAIP, putative [Ricinus communis]
           gi|223530672|gb|EEF32545.1| DELLA protein GAIP, putative
           [Ricinus communis]
          Length = 519

 Score =  107 bits (266), Expect = 1e-21
 Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
 Frame = -2

Query: 249 MAIGGPARSGEDKFVSWRMELAQRG--FLPVPMSSNAMAQAQLILNMFPASLGHMILQGD 76
           +AIGGPARSGEDK   WR ELA R   F+ VPMS N+MAQAQLILNMFP + G+ + QG 
Sbjct: 436 LAIGGPARSGEDKLRHWRSELAARSTSFMQVPMSGNSMAQAQLILNMFPPAHGYSLAQG- 494

Query: 75  DGTLRLGWKETGLYTASAWT 16
           +G LRLGWK+T L+TASAWT
Sbjct: 495 EGALRLGWKDTSLFTASAWT 514


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