BLASTX nr result

ID: Dioscorea21_contig00006749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006749
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47118.1| unknown [Lotus japonicus]                              153   2e-35
gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sa...   152   7e-35
gb|AFK48773.1| unknown [Lotus japonicus]                              151   9e-35
ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ...   151   9e-35
ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycin...   149   5e-34

>gb|AFK47118.1| unknown [Lotus japonicus]
          Length = 146

 Score =  153 bits (387), Expect = 2e-35
 Identities = 77/119 (64%), Positives = 98/119 (82%)
 Frame = +3

Query: 81  MSFQSKLGGLIFRHGSLTNGISKSPFPGLLNFTRCMSSTKLFIGGLSYGTDDQSLKEAFN 260
           M+F +K+G ++ R G+     S++P   +LN+ RCMSS+KLFIGGLSYG DD+SL++AF+
Sbjct: 1   MAFLNKVGNVL-RQGAAQR--SQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAFS 57

Query: 261 PFGNVVEARVITDRDTGRSRGFGFVNFDSEESANAALSKMDGQVVEGRNIRVSHANERP 437
            FG V EARVI DRDTGRSRGFGFV+FDSEESA++ALS MDGQ + GRNIRVS+AN+RP
Sbjct: 58  SFGTVAEARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQDLNGRNIRVSYANDRP 116


>gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
           gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding
           protein [Pisum sativum]
          Length = 146

 Score =  152 bits (383), Expect = 7e-35
 Identities = 80/119 (67%), Positives = 96/119 (80%)
 Frame = +3

Query: 81  MSFQSKLGGLIFRHGSLTNGISKSPFPGLLNFTRCMSSTKLFIGGLSYGTDDQSLKEAFN 260
           M+F +KLG L+ R G+  +  S +P   +LN+ R MSS+KLFIGGLSYG DDQSLK+AF 
Sbjct: 1   MAFCNKLGNLL-RQGATQS--SHAPVSSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFA 57

Query: 261 PFGNVVEARVITDRDTGRSRGFGFVNFDSEESANAALSKMDGQVVEGRNIRVSHANERP 437
            +G VVEARVITDRDTGRSRGFGFVNF S+ESA +ALS MDGQ + GRNIRVS+AN+RP
Sbjct: 58  SYGEVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDRP 116


>gb|AFK48773.1| unknown [Lotus japonicus]
          Length = 146

 Score =  151 bits (382), Expect = 9e-35
 Identities = 75/119 (63%), Positives = 97/119 (81%)
 Frame = +3

Query: 81  MSFQSKLGGLIFRHGSLTNGISKSPFPGLLNFTRCMSSTKLFIGGLSYGTDDQSLKEAFN 260
           M+F +K+G ++ +  +     S++P   +LN+ RCMSS+KLFIGGLSYG DD+SL++AF+
Sbjct: 1   MAFLNKVGNVLRQAAAQR---SQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAFS 57

Query: 261 PFGNVVEARVITDRDTGRSRGFGFVNFDSEESANAALSKMDGQVVEGRNIRVSHANERP 437
            FG V EARVI DRDTGRSRGFGFV+FDSEESA++ALS MDGQ + GRNIRVS+AN+RP
Sbjct: 58  SFGTVAEARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQDLNGRNIRVSYANDRP 116


>ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|147833478|emb|CAN75185.1| hypothetical
           protein VITISV_001912 [Vitis vinifera]
           gi|298205231|emb|CBI17290.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score =  151 bits (382), Expect = 9e-35
 Identities = 81/120 (67%), Positives = 94/120 (78%), Gaps = 2/120 (1%)
 Frame = +3

Query: 81  MSFQSKLGGLIFRHGSLTNGISKSP--FPGLLNFTRCMSSTKLFIGGLSYGTDDQSLKEA 254
           M+F ++ G L+ R     N  SK       LLN  RCMSS KLFIGGLSYGTDDQSLK+A
Sbjct: 1   MAFCNRFGNLL-RQSISQNSASKGQGSMGALLNSIRCMSSAKLFIGGLSYGTDDQSLKDA 59

Query: 255 FNPFGNVVEARVITDRDTGRSRGFGFVNFDSEESANAALSKMDGQVVEGRNIRVSHANER 434
           F+ FG+VVEARVITDRDTGRSRGFGFVNF S++SA++ALS MDGQ + GRNIRVS+ANER
Sbjct: 60  FSSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSALSAMDGQELNGRNIRVSYANER 119


>ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
           gi|255631812|gb|ACU16273.1| unknown [Glycine max]
          Length = 138

 Score =  149 bits (376), Expect = 5e-34
 Identities = 73/119 (61%), Positives = 102/119 (85%)
 Frame = +3

Query: 81  MSFQSKLGGLIFRHGSLTNGISKSPFPGLLNFTRCMSSTKLFIGGLSYGTDDQSLKEAFN 260
           M+F +K+G ++ R G+  +  +++P   +LN+ RCMSS+KLFIGGLSYG DDQSLK+AF+
Sbjct: 1   MAFCNKVGNVL-RQGAARS--TQAPVSSMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFS 57

Query: 261 PFGNVVEARVITDRDTGRSRGFGFVNFDSEESANAALSKMDGQVVEGRNIRVSHANERP 437
            FG+VV+A+VITDRD+GRSRGFGFVNF ++ESA++ALS MDG+ ++GR+IRVS+AN+RP
Sbjct: 58  GFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLDGRSIRVSYANDRP 116


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