BLASTX nr result
ID: Dioscorea21_contig00006738
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00006738
(753 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002874675.1| hypothetical protein ARALYDRAFT_489948 [Arab... 122 1e-37
ref|NP_192847.1| protein trichome birefringence-like 23 [Arabido... 119 9e-37
ref|XP_002273303.1| PREDICTED: uncharacterized protein LOC100265... 113 2e-36
emb|CAN70903.1| hypothetical protein VITISV_028215 [Vitis vinifera] 113 2e-36
ref|XP_002320186.1| predicted protein [Populus trichocarpa] gi|2... 105 8e-35
>ref|XP_002874675.1| hypothetical protein ARALYDRAFT_489948 [Arabidopsis lyrata subsp.
lyrata] gi|297320512|gb|EFH50934.1| hypothetical protein
ARALYDRAFT_489948 [Arabidopsis lyrata subsp. lyrata]
Length = 429
Score = 122 bits (306), Expect(2) = 1e-37
Identities = 55/87 (63%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
Frame = -1
Query: 270 FLHWKWQPNNCDLPPFDPLKFLNAMRNKSFALIGDSVFRNHARSLLCLLSVVAKPDEIYH 91
FL+WKW+PN+C LP FD L+FL MRNKS+A+IGDS+ RNH SLLC+LS+V KP E+YH
Sbjct: 121 FLYWKWKPNDCSLPRFDSLRFLQLMRNKSWAIIGDSIARNHVESLLCMLSIVEKPVEVYH 180
Query: 90 DRT-NSGIFYYSEYNFTIYDIWSPFLV 13
D S +Y+ YNFTI +IWSPFLV
Sbjct: 181 DENYRSKRWYFPLYNFTISNIWSPFLV 207
Score = 60.5 bits (145), Expect(2) = 1e-37
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Frame = -3
Query: 673 LFRFIGVVLLAVATFYLFVGNFSSWTGAVKNVNKQELVENIRPLMKELGVKEQQY---LK 503
L + + L+ F FV F ++ +VN + I P + E Q ++
Sbjct: 18 LIKLVAATLITCLAFRFFVFRFGQFSPVQVSVNGNSNSQ-ISPPSFIISDNEDQIPVDIE 76
Query: 502 QEVCDLSVGKWIPKPEGPLYTNETCDYMA-SYTNCLKNGRPD 380
E CDL GKWI P GP+YTNE+C + + NC+ NGRPD
Sbjct: 77 VEKCDLFTGKWIKDPLGPIYTNESCGIVVDGHQNCITNGRPD 118
>ref|NP_192847.1| protein trichome birefringence-like 23 [Arabidopsis thaliana]
gi|3600054|gb|AAC35541.1| F2P3.4 gene product
[Arabidopsis thaliana] gi|4850288|emb|CAB43044.1|
putative protein [Arabidopsis thaliana]
gi|7267808|emb|CAB81210.1| putative protein [Arabidopsis
thaliana] gi|71143056|gb|AAZ23919.1| At4g11090
[Arabidopsis thaliana] gi|332657571|gb|AEE82971.1|
protein trichome birefringence-like 23 [Arabidopsis
thaliana]
Length = 432
Score = 119 bits (299), Expect(2) = 9e-37
Identities = 53/87 (60%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = -1
Query: 270 FLHWKWQPNNCDLPPFDPLKFLNAMRNKSFALIGDSVFRNHARSLLCLLSVVAKPDEIYH 91
FL+WKW+PN+C LP FD L+FL MRNKS+A+IGDS+ RNH SLLC+LS V KP E+YH
Sbjct: 120 FLNWKWKPNDCSLPRFDSLRFLQLMRNKSWAIIGDSIARNHVESLLCMLSTVEKPVEVYH 179
Query: 90 DRT-NSGIFYYSEYNFTIYDIWSPFLV 13
D S +++ YNFT+ +IWSPFLV
Sbjct: 180 DENYRSKRWHFPSYNFTVSNIWSPFLV 206
Score = 60.5 bits (145), Expect(2) = 9e-37
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Frame = -3
Query: 673 LFRFIGVVLLAVATFYLFVGNFSSWTGAVKNVNKQELVENIRPLMKELGVKEQQY---LK 503
L + + L+ F FV F ++ +V + I P L E Q ++
Sbjct: 17 LIKLVAATLITCLAFRFFVFRFGQFSPVQVSVTGNSNSQ-ISPTSVILSDNEDQIPVDIE 75
Query: 502 QEVCDLSVGKWIPKPEGPLYTNETCDYMA-SYTNCLKNGRPD 380
E CDL GKWI P GP+YTNE+C + ++ NC+ NGRPD
Sbjct: 76 VEKCDLFTGKWIKDPLGPIYTNESCGIVVDAHQNCITNGRPD 117
>ref|XP_002273303.1| PREDICTED: uncharacterized protein LOC100265666 [Vitis vinifera]
gi|297742310|emb|CBI34459.3| unnamed protein product
[Vitis vinifera]
Length = 427
Score = 113 bits (283), Expect(2) = 2e-36
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Frame = -1
Query: 270 FLHWKWQPNNCDLPPFDPLKFLNAMRNKSFALIGDSVFRNHARSLLCLLSVVAKPDEIYH 91
+L+W+W P +C+LP FDP +FL MRNK++ALIGDS+ RNH +SLLC+LS V +PD +YH
Sbjct: 120 YLYWRWSPRDCELPQFDPYRFLELMRNKAWALIGDSITRNHVQSLLCILSKVEQPDHVYH 179
Query: 90 DR-TNSGIFYYSEYNFTIYDIWSPFLV 13
D+ S + + YNFTI +WSPFLV
Sbjct: 180 DKGYKSRRWVFPSYNFTISVLWSPFLV 206
Score = 65.5 bits (158), Expect(2) = 2e-36
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Frame = -3
Query: 661 IGVVLLAVATFYLFVGNFSSWTGAVK-----NVNKQELVENIRPLMKELGVKEQQYLKQE 497
+ ++L+ +A LFV + T V+ N E V IR + E V E+
Sbjct: 26 VSILLMGLAFRLLFVHSTVPETPFVEKPVIPNPPVSEDVPEIRDPIPEKVVAEK------ 79
Query: 496 VCDLSVGKWIPKPEGPLYTNETCDYMASYTNCLKNGRPD 380
CDL G WIP P GP+YTNE+C + ++ NC+KNGRPD
Sbjct: 80 -CDLFTGDWIPNPSGPVYTNESCQLIETHQNCMKNGRPD 117
>emb|CAN70903.1| hypothetical protein VITISV_028215 [Vitis vinifera]
Length = 420
Score = 113 bits (283), Expect(2) = 2e-36
Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Frame = -1
Query: 270 FLHWKWQPNNCDLPPFDPLKFLNAMRNKSFALIGDSVFRNHARSLLCLLSVVAKPDEIYH 91
+L+W+W P +C+LP FDP +FL MRNK++ALIGDS+ RNH +SLLC+LS V +PD +YH
Sbjct: 113 YLYWRWSPRDCELPQFDPYRFLELMRNKAWALIGDSITRNHVQSLLCILSKVEQPDHVYH 172
Query: 90 DR-TNSGIFYYSEYNFTIYDIWSPFLV 13
D+ S + + YNFTI +WSPFLV
Sbjct: 173 DKGYKSRRWVFPSYNFTISVLWSPFLV 199
Score = 65.5 bits (158), Expect(2) = 2e-36
Identities = 33/94 (35%), Positives = 55/94 (58%)
Frame = -3
Query: 661 IGVVLLAVATFYLFVGNFSSWTGAVKNVNKQELVENIRPLMKELGVKEQQYLKQEVCDLS 482
+ ++L+ +A LFV + T V+ + ++ N P+ +++ ++E CDL
Sbjct: 22 VSILLMGLAFRLLFVHSTVPETPFVE----KPVIPN-PPVSEDVPEIRDPIPEKEKCDLF 76
Query: 481 VGKWIPKPEGPLYTNETCDYMASYTNCLKNGRPD 380
G WIP P GP+YTNE+C + ++ NC+KNGRPD
Sbjct: 77 TGDWIPNPSGPVYTNESCQLIETHQNCMKNGRPD 110
>ref|XP_002320186.1| predicted protein [Populus trichocarpa] gi|222860959|gb|EEE98501.1|
predicted protein [Populus trichocarpa]
Length = 442
Score = 105 bits (262), Expect(2) = 8e-35
Identities = 47/87 (54%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = -1
Query: 270 FLHWKWQPNNCDLPPFDPLKFLNAMRNKSFALIGDSVFRNHARSLLCLLSVVAKPDEIYH 91
+LHW+W P C LP F+P KFL MRNKS+A IGDS+ RNH +SLLC LS V + E+YH
Sbjct: 131 YLHWRWNPRGCSLPRFNPKKFLRLMRNKSWAFIGDSISRNHVQSLLCTLSQVEQAVEVYH 190
Query: 90 DRT-NSGIFYYSEYNFTIYDIWSPFLV 13
D S I+ + +NFT+ IW+PFL+
Sbjct: 191 DEEYRSRIWRFPSHNFTLSVIWTPFLI 217
Score = 68.2 bits (165), Expect(2) = 8e-35
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Frame = -3
Query: 676 MLFRFIGVVLLAVATFYLFVGN---FSSWTGAVKNVNKQELVENI-------RPLMKELG 527
++ +F LL F+L + + FSS + N++ E++ P+ +
Sbjct: 20 VIIKFAVSFLLVGLAFHLLISDSFRFSSVVETLVPANEETEPESLVASLPAEEPVSNDFA 79
Query: 526 VKEQQYLKQEVCDLSVGKWIPKPEGPLYTNETCDYMASYTNCLKNGRPD 380
E Q + CDL VG WIP P GP YTN++C + + NC+KNGRPD
Sbjct: 80 ANESQTSQPGKCDLFVGDWIPDPSGPFYTNQSCLQIEGHQNCMKNGRPD 128