BLASTX nr result

ID: Dioscorea21_contig00006716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006716
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA51178.1| TPA: putative POX domain/homeobox DNA-binding do...   399   e-109
ref|NP_001148063.1| homeodomain protein JUBEL1 [Zea mays] gi|195...   399   e-109
ref|XP_002466514.1| hypothetical protein SORBIDRAFT_01g009130 [S...   397   e-108
ref|XP_002269670.1| PREDICTED: BEL1-like homeodomain protein 4-l...   397   e-108
gb|AAF43095.1|AF053769_1 homeodomain protein [Malus x domestica]      395   e-107

>tpg|DAA51178.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
            [Zea mays]
          Length = 755

 Score =  399 bits (1026), Expect = e-109
 Identities = 197/254 (77%), Positives = 208/254 (81%)
 Frame = +2

Query: 281  RSSKYARPAQELLEEFCSVGRGQLKGSRIGRHHHXXXXXXXXXXXXXXXXXXXXXXXXXX 460
            R+SKY R AQELLEEFCSVGRGQ+KG   G                              
Sbjct: 355  RNSKYTRAAQELLEEFCSVGRGQIKGGGRGASASNPNNNPGNKGGASSSGAAAQSPSSAP 414

Query: 461  KDVPPPLSPADRFEQQRKKAKLLSMLDEVDRRYNHYCDQMQMVVNSFDAVMGFGAATPYT 640
               PP LSPADRFEQQRKKAKL+SMLDEVDRRYNHYCDQMQMVVN FD+VMGFGAATPYT
Sbjct: 415  NKEPPQLSPADRFEQQRKKAKLISMLDEVDRRYNHYCDQMQMVVNFFDSVMGFGAATPYT 474

Query: 641  ALAQKAMSRHFRCLKDAIAVQLKQTCELLGEKDGGGTSGITKGETPRLKLLDQSLRQQRA 820
            ALAQKAMSRHFRCLKDAIA QL+ TCELLGEKD G +SG+TKGETPRL+ +DQSLRQQRA
Sbjct: 475  ALAQKAMSRHFRCLKDAIAAQLRATCELLGEKDAGTSSGLTKGETPRLRAIDQSLRQQRA 534

Query: 821  FHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSN 1000
            FH MGMMEQEAWRPQRGLPERSVNILR+WLFEHFLHPYPSDADKHLLARQTGLSRNQVSN
Sbjct: 535  FHHMGMMEQEAWRPQRGLPERSVNILRSWLFEHFLHPYPSDADKHLLARQTGLSRNQVSN 594

Query: 1001 WFINARVRLWKPMV 1042
            WFINARVRLWKPM+
Sbjct: 595  WFINARVRLWKPMI 608



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 33/40 (82%), Positives = 36/40 (90%), Gaps = 1/40 (2%)
 Frame = +1

Query: 10  GRGVVEGQGLSLSLASNLQQFEMAK-AEELRMRDGVLYFN 126
           G GVVEGQGLSLSL+ +LQQ EMAK AEELR+RDGVLYFN
Sbjct: 277 GTGVVEGQGLSLSLSPSLQQLEMAKQAEELRVRDGVLYFN 316


>ref|NP_001148063.1| homeodomain protein JUBEL1 [Zea mays] gi|195615578|gb|ACG29619.1|
            homeodomain protein JUBEL1 [Zea mays]
          Length = 755

 Score =  399 bits (1026), Expect = e-109
 Identities = 197/254 (77%), Positives = 208/254 (81%)
 Frame = +2

Query: 281  RSSKYARPAQELLEEFCSVGRGQLKGSRIGRHHHXXXXXXXXXXXXXXXXXXXXXXXXXX 460
            R+SKY R AQELLEEFCSVGRGQ+KG   G                              
Sbjct: 355  RNSKYTRAAQELLEEFCSVGRGQIKGGGRGASASNPNNNPGNKGGASSSGAAAQSPSSAP 414

Query: 461  KDVPPPLSPADRFEQQRKKAKLLSMLDEVDRRYNHYCDQMQMVVNSFDAVMGFGAATPYT 640
               PP LSPADRFEQQRKKAKL+SMLDEVDRRYNHYCDQMQMVVN FD+VMGFGAATPYT
Sbjct: 415  NKEPPQLSPADRFEQQRKKAKLISMLDEVDRRYNHYCDQMQMVVNFFDSVMGFGAATPYT 474

Query: 641  ALAQKAMSRHFRCLKDAIAVQLKQTCELLGEKDGGGTSGITKGETPRLKLLDQSLRQQRA 820
            ALAQKAMSRHFRCLKDAIA QL+ TCELLGEKD G +SG+TKGETPRL+ +DQSLRQQRA
Sbjct: 475  ALAQKAMSRHFRCLKDAIAAQLRATCELLGEKDAGTSSGLTKGETPRLRAIDQSLRQQRA 534

Query: 821  FHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSN 1000
            FH MGMMEQEAWRPQRGLPERSVNILR+WLFEHFLHPYPSDADKHLLARQTGLSRNQVSN
Sbjct: 535  FHHMGMMEQEAWRPQRGLPERSVNILRSWLFEHFLHPYPSDADKHLLARQTGLSRNQVSN 594

Query: 1001 WFINARVRLWKPMV 1042
            WFINARVRLWKPM+
Sbjct: 595  WFINARVRLWKPMI 608



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 33/40 (82%), Positives = 36/40 (90%), Gaps = 1/40 (2%)
 Frame = +1

Query: 10  GRGVVEGQGLSLSLASNLQQFEMAK-AEELRMRDGVLYFN 126
           G GVVEGQGLSLSL+ +LQQ EMAK AEELR+RDGVLYFN
Sbjct: 277 GTGVVEGQGLSLSLSPSLQQLEMAKQAEELRVRDGVLYFN 316


>ref|XP_002466514.1| hypothetical protein SORBIDRAFT_01g009130 [Sorghum bicolor]
            gi|241920368|gb|EER93512.1| hypothetical protein
            SORBIDRAFT_01g009130 [Sorghum bicolor]
          Length = 770

 Score =  397 bits (1021), Expect = e-108
 Identities = 196/254 (77%), Positives = 207/254 (81%)
 Frame = +2

Query: 281  RSSKYARPAQELLEEFCSVGRGQLKGSRIGRHHHXXXXXXXXXXXXXXXXXXXXXXXXXX 460
            R+SKY R AQELLEEFCSVGRGQ+KG   G                              
Sbjct: 363  RNSKYTRAAQELLEEFCSVGRGQIKGGARGGRGASASNPNASNKQGGASSSGAAQSPSSA 422

Query: 461  KDVPPPLSPADRFEQQRKKAKLLSMLDEVDRRYNHYCDQMQMVVNSFDAVMGFGAATPYT 640
               PP LSPADRFE QRKKAKL+SMLDEVDRRYNHYCDQMQMVVN FD+VMGFGAATPYT
Sbjct: 423  SKEPPQLSPADRFEHQRKKAKLISMLDEVDRRYNHYCDQMQMVVNFFDSVMGFGAATPYT 482

Query: 641  ALAQKAMSRHFRCLKDAIAVQLKQTCELLGEKDGGGTSGITKGETPRLKLLDQSLRQQRA 820
            ALAQKAMSRHFRCLKDAIA QL+ TCELLGEKD G +SG+TKGETPRL+ +DQSLRQQRA
Sbjct: 483  ALAQKAMSRHFRCLKDAIAAQLRTTCELLGEKDAGTSSGLTKGETPRLRAIDQSLRQQRA 542

Query: 821  FHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSN 1000
            FH MGMMEQEAWRPQRGLPERSVNILR+WLFEHFLHPYPSDADKHLLARQTGLSRNQVSN
Sbjct: 543  FHHMGMMEQEAWRPQRGLPERSVNILRSWLFEHFLHPYPSDADKHLLARQTGLSRNQVSN 602

Query: 1001 WFINARVRLWKPMV 1042
            WFINARVRLWKPM+
Sbjct: 603  WFINARVRLWKPMI 616



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 33/40 (82%), Positives = 36/40 (90%), Gaps = 1/40 (2%)
 Frame = +1

Query: 10  GRGVVEGQGLSLSLASNLQQFEMAK-AEELRMRDGVLYFN 126
           G GVVEGQGLSLSL+ +LQQ EMAK AEELR+RDGVLYFN
Sbjct: 279 GTGVVEGQGLSLSLSPSLQQLEMAKQAEELRVRDGVLYFN 318


>ref|XP_002269670.1| PREDICTED: BEL1-like homeodomain protein 4-like [Vitis vinifera]
          Length = 766

 Score =  397 bits (1021), Expect = e-108
 Identities = 199/254 (78%), Positives = 212/254 (83%)
 Frame = +2

Query: 281  RSSKYARPAQELLEEFCSVGRGQLKGSRIGRHHHXXXXXXXXXXXXXXXXXXXXXXXXXX 460
            R+SKY + AQELLEEFCSVGRGQ K ++ GRH+                           
Sbjct: 332  RNSKYVKAAQELLEEFCSVGRGQFKKNKFGRHN------TNPNSNPGGGSAGGGGSSSSS 385

Query: 461  KDVPPPLSPADRFEQQRKKAKLLSMLDEVDRRYNHYCDQMQMVVNSFDAVMGFGAATPYT 640
            KD+PP LS ADR E QR+K KLLSMLDEVDRRYNHYC+QMQMVVNSFD VMGFGAA PYT
Sbjct: 386  KDLPP-LSAADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDLVMGFGAAVPYT 444

Query: 641  ALAQKAMSRHFRCLKDAIAVQLKQTCELLGEKDGGGTSGITKGETPRLKLLDQSLRQQRA 820
            ALAQKAMSRHFRCLKDAIAVQLK +CELLGEKD  GTSG+TKGETPRL+LL+QSLRQQRA
Sbjct: 445  ALAQKAMSRHFRCLKDAIAVQLKHSCELLGEKDPSGTSGVTKGETPRLRLLEQSLRQQRA 504

Query: 821  FHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSN 1000
            FHQMGMMEQEAWRPQRGLPERSVNILR+WLFEHFLHPYPSDADKHLLARQTGLSRNQVSN
Sbjct: 505  FHQMGMMEQEAWRPQRGLPERSVNILRSWLFEHFLHPYPSDADKHLLARQTGLSRNQVSN 564

Query: 1001 WFINARVRLWKPMV 1042
            WFINARVRLWKPMV
Sbjct: 565  WFINARVRLWKPMV 578


>gb|AAF43095.1|AF053769_1 homeodomain protein [Malus x domestica]
          Length = 809

 Score =  395 bits (1014), Expect = e-107
 Identities = 202/259 (77%), Positives = 212/259 (81%), Gaps = 5/259 (1%)
 Frame = +2

Query: 281  RSSKYARPAQELLEEFCSVGRGQLK-----GSRIGRHHHXXXXXXXXXXXXXXXXXXXXX 445
            R+SKY + AQELLEEFCSVGRGQLK     GS  GR +                      
Sbjct: 365  RNSKYVKAAQELLEEFCSVGRGQLKKNKFGGSTSGRQN---TTTNPSSNPASGGGGDGGA 421

Query: 446  XXXXXKDVPPPLSPADRFEQQRKKAKLLSMLDEVDRRYNHYCDQMQMVVNSFDAVMGFGA 625
                 KDVPP LS ADR E QR+K KLLSM+DEVDRRYNHYC+QMQMVVN+FD VMGFGA
Sbjct: 422  SSSSSKDVPP-LSAADRIEHQRRKVKLLSMIDEVDRRYNHYCEQMQMVVNAFDLVMGFGA 480

Query: 626  ATPYTALAQKAMSRHFRCLKDAIAVQLKQTCELLGEKDGGGTSGITKGETPRLKLLDQSL 805
            A PYTALAQKAMSRHFRCLKDAIA QLK +CEL+GEKDG GTSGITKGETPRLKLL+QSL
Sbjct: 481  AVPYTALAQKAMSRHFRCLKDAIAAQLKHSCELIGEKDGAGTSGITKGETPRLKLLEQSL 540

Query: 806  RQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSR 985
            RQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSR
Sbjct: 541  RQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSR 600

Query: 986  NQVSNWFINARVRLWKPMV 1042
            NQVSNWFINARVRLWKPMV
Sbjct: 601  NQVSNWFINARVRLWKPMV 619


Top