BLASTX nr result

ID: Dioscorea21_contig00006707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006707
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297914.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_002865230.1| predicted protein [Arabidopsis lyrata subsp....   130   8e-29
ref|XP_004134516.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   129   2e-28
pdb|1U79|A Chain A, Crystal Structure Of Atfkbp13 gi|55670203|pd...   129   2e-28
ref|NP_199380.1| FKBP-type peptidyl-prolyl cis-trans isomerase 3...   129   2e-28

>ref|XP_002297914.1| predicted protein [Populus trichocarpa] gi|222845172|gb|EEE82719.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = -3

Query: 205 SYNRGKPLTFRVGVGEVIQGWDQGILGSDGVPPMLPGGKRKLKVPPELAYGIRGAGCKAG 26
           SYNRGKPLTFRVGVGEVI+GWDQGILG DG+PPML GGKRKLK+PPELAYG+RGAGCK G
Sbjct: 130 SYNRGKPLTFRVGVGEVIKGWDQGILGGDGIPPMLAGGKRKLKLPPELAYGMRGAGCKGG 189

Query: 25  SCIIPPNS 2
           SCIIPP+S
Sbjct: 190 SCIIPPDS 197


>ref|XP_002865230.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311065|gb|EFH41489.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 208

 Score =  130 bits (328), Expect = 8e-29
 Identities = 58/68 (85%), Positives = 63/68 (92%)
 Frame = -3

Query: 205 SYNRGKPLTFRVGVGEVIQGWDQGILGSDGVPPMLPGGKRKLKVPPELAYGIRGAGCKAG 26
           SYNRGKPLTFR+GVGEVI+GWDQGILGSDG+PPML GGKR LK+PPELAYG RGAGCK G
Sbjct: 129 SYNRGKPLTFRIGVGEVIRGWDQGILGSDGIPPMLTGGKRTLKIPPELAYGDRGAGCKGG 188

Query: 25  SCIIPPNS 2
           SC+IPP S
Sbjct: 189 SCLIPPAS 196


>ref|XP_004134516.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP13,
           chloroplastic-like isoform 1 [Cucumis sativus]
          Length = 214

 Score =  129 bits (325), Expect = 2e-28
 Identities = 58/68 (85%), Positives = 62/68 (91%)
 Frame = -3

Query: 205 SYNRGKPLTFRVGVGEVIQGWDQGILGSDGVPPMLPGGKRKLKVPPELAYGIRGAGCKAG 26
           SYNRGKPLTFRVGVGEVI+GWD+GILG DGVP MLPGGKR LK+PPEL YG RGAGC+ G
Sbjct: 135 SYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPPELGYGARGAGCRGG 194

Query: 25  SCIIPPNS 2
           SCIIPPNS
Sbjct: 195 SCIIPPNS 202


>pdb|1U79|A Chain A, Crystal Structure Of Atfkbp13 gi|55670203|pdb|1U79|B Chain
           B, Crystal Structure Of Atfkbp13 gi|55670204|pdb|1U79|C
           Chain C, Crystal Structure Of Atfkbp13
           gi|55670205|pdb|1U79|D Chain D, Crystal Structure Of
           Atfkbp13 gi|55670206|pdb|1U79|E Chain E, Crystal
           Structure Of Atfkbp13 gi|82407504|pdb|1Y0O|A Chain A,
           Crystal Structure Of Reduced Atfkbp13
           gi|82407505|pdb|1Y0O|B Chain B, Crystal Structure Of
           Reduced Atfkbp13 gi|82407506|pdb|1Y0O|C Chain C, Crystal
           Structure Of Reduced Atfkbp13 gi|82407507|pdb|1Y0O|D
           Chain D, Crystal Structure Of Reduced Atfkbp13
           gi|82407508|pdb|1Y0O|E Chain E, Crystal Structure Of
           Reduced Atfkbp13
          Length = 129

 Score =  129 bits (325), Expect = 2e-28
 Identities = 57/68 (83%), Positives = 63/68 (92%)
 Frame = -3

Query: 205 SYNRGKPLTFRVGVGEVIQGWDQGILGSDGVPPMLPGGKRKLKVPPELAYGIRGAGCKAG 26
           SYNRGKPLTFR+GVGEVI+GWDQGILGSDG+PPML GGKR L++PPELAYG RGAGCK G
Sbjct: 50  SYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGG 109

Query: 25  SCIIPPNS 2
           SC+IPP S
Sbjct: 110 SCLIPPAS 117


>ref|NP_199380.1| FKBP-type peptidyl-prolyl cis-trans isomerase 3 [Arabidopsis
           thaliana] gi|21542069|sp|Q9SCY2.2|FKB13_ARATH RecName:
           Full=Peptidyl-prolyl cis-trans isomerase FKBP13,
           chloroplastic; Short=PPIase FKBP13; AltName:
           Full=FK506-binding protein 1; AltName:
           Full=FK506-binding protein 13; Short=AtFKBP13; AltName:
           Full=Immunophilin FKBP13; AltName: Full=Rotamase; Flags:
           Precursor gi|9758671|dbj|BAB09210.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|18086457|gb|AAL57682.1| AT5g45680/MRA19_7
           [Arabidopsis thaliana] gi|20147125|gb|AAM10279.1|
           AT5g45680/MRA19_7 [Arabidopsis thaliana]
           gi|332007900|gb|AED95283.1| FKBP-type peptidyl-prolyl
           cis-trans isomerase 3 [Arabidopsis thaliana]
          Length = 208

 Score =  129 bits (325), Expect = 2e-28
 Identities = 57/68 (83%), Positives = 63/68 (92%)
 Frame = -3

Query: 205 SYNRGKPLTFRVGVGEVIQGWDQGILGSDGVPPMLPGGKRKLKVPPELAYGIRGAGCKAG 26
           SYNRGKPLTFR+GVGEVI+GWDQGILGSDG+PPML GGKR L++PPELAYG RGAGCK G
Sbjct: 129 SYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGG 188

Query: 25  SCIIPPNS 2
           SC+IPP S
Sbjct: 189 SCLIPPAS 196


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