BLASTX nr result

ID: Dioscorea21_contig00006671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006671
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q60EQ4.2|NFYB3_ORYSJ RecName: Full=Nuclear transcription fact...   240   3e-61
dbj|BAC76332.1| HAP3 [Oryza sativa Japonica Group]                    240   3e-61
ref|XP_003568278.1| PREDICTED: nuclear transcription factor Y su...   239   5e-61
gb|AAU90178.1| putative CCAAT-binding transcription factor subun...   237   3e-60
emb|CBH26150.1| CAAT-box DNA binding protein [Zea mays] gi|26211...   235   9e-60

>sp|Q60EQ4.2|NFYB3_ORYSJ RecName: Full=Nuclear transcription factor Y subunit B-3; AltName:
           Full=OsNF-YB-3; AltName: Full=Transcriptional activator
           HAP3B gi|215704747|dbj|BAG94775.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 185

 Score =  240 bits (613), Expect = 3e-61
 Identities = 123/166 (74%), Positives = 135/166 (81%)
 Frame = -2

Query: 802 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRK 623
           VREQDR+LPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFITSEASDKCQ+EKRK
Sbjct: 36  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 95

Query: 622 TINGDDLLWAMATLGFEDYIEPLKLYLQKYREMEXXXXXXXXXXXXXXXGDSKATAKGSD 443
           TINGDDLLWAMATLGFEDYIEPLK+YLQKYREME               GDSK TAK  D
Sbjct: 96  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREME---------------GDSKLTAKAGD 140

Query: 442 GSVRKEAGVLHGGTQPGSSSQGMAQHVSFTQGMNYMHPQFHNGDLS 305
           GSV+K+    HGG+   SS+QGM Q  ++ QGM YM PQ+HNGD+S
Sbjct: 141 GSVKKDVLGSHGGS--SSSAQGMGQQAAYNQGMGYMQPQYHNGDVS 184


>dbj|BAC76332.1| HAP3 [Oryza sativa Japonica Group]
          Length = 167

 Score =  240 bits (613), Expect = 3e-61
 Identities = 123/166 (74%), Positives = 135/166 (81%)
 Frame = -2

Query: 802 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRK 623
           VREQDR+LPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFITSEASDKCQ+EKRK
Sbjct: 18  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 77

Query: 622 TINGDDLLWAMATLGFEDYIEPLKLYLQKYREMEXXXXXXXXXXXXXXXGDSKATAKGSD 443
           TINGDDLLWAMATLGFEDYIEPLK+YLQKYREME               GDSK TAK  D
Sbjct: 78  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREME---------------GDSKLTAKAGD 122

Query: 442 GSVRKEAGVLHGGTQPGSSSQGMAQHVSFTQGMNYMHPQFHNGDLS 305
           GSV+K+    HGG+   SS+QGM Q  ++ QGM YM PQ+HNGD+S
Sbjct: 123 GSVKKDVLGSHGGS--SSSAQGMGQQAAYNQGMGYMQPQYHNGDVS 166


>ref|XP_003568278.1| PREDICTED: nuclear transcription factor Y subunit B-like
           [Brachypodium distachyon]
          Length = 182

 Score =  239 bits (611), Expect = 5e-61
 Identities = 123/166 (74%), Positives = 135/166 (81%)
 Frame = -2

Query: 802 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRK 623
           VREQDR+LPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFITSEASDKCQ+EKRK
Sbjct: 32  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 91

Query: 622 TINGDDLLWAMATLGFEDYIEPLKLYLQKYREMEXXXXXXXXXXXXXXXGDSKATAKGSD 443
           TINGDDLLWAMATLGFEDYIEPLK+YLQKYREME               GDSK T+K  D
Sbjct: 92  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREME---------------GDSKLTSKSGD 136

Query: 442 GSVRKEAGVLHGGTQPGSSSQGMAQHVSFTQGMNYMHPQFHNGDLS 305
           GSV+K+    H GT   SS+QGM Q V++ QGM YM PQ+HNGD+S
Sbjct: 137 GSVKKDTLGPHTGTS-SSSAQGMGQQVAYNQGMGYMQPQYHNGDIS 181


>gb|AAU90178.1| putative CCAAT-binding transcription factor subunit A [Oryza sativa
           Japonica Group]
          Length = 187

 Score =  237 bits (604), Expect = 3e-60
 Identities = 121/166 (72%), Positives = 134/166 (80%)
 Frame = -2

Query: 802 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRK 623
           VREQDR+LPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFITSEASDKCQ+EKRK
Sbjct: 36  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 95

Query: 622 TINGDDLLWAMATLGFEDYIEPLKLYLQKYREMEXXXXXXXXXXXXXXXGDSKATAKGSD 443
           TINGDDLLWAMATLGFEDYIEPLK+YLQKYRE+                GDSK TAK  D
Sbjct: 96  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREVR-------------TDGDSKLTAKAGD 142

Query: 442 GSVRKEAGVLHGGTQPGSSSQGMAQHVSFTQGMNYMHPQFHNGDLS 305
           GSV+K+    HGG+   SS+QGM Q  ++ QGM YM PQ+HNGD+S
Sbjct: 143 GSVKKDVLGSHGGS--SSSAQGMGQQAAYNQGMGYMQPQYHNGDVS 186


>emb|CBH26150.1| CAAT-box DNA binding protein [Zea mays]
           gi|262113636|emb|CBH26151.1| CAAT-box DNA binding
           protein [Zea mays]
          Length = 178

 Score =  235 bits (600), Expect = 9e-60
 Identities = 122/166 (73%), Positives = 136/166 (81%)
 Frame = -2

Query: 802 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRK 623
           VREQDR+LPIANISRIMKKA+PANGKIAKDAKETVQECVSEFISFITSEASDKCQ+EKRK
Sbjct: 29  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 88

Query: 622 TINGDDLLWAMATLGFEDYIEPLKLYLQKYREMEXXXXXXXXXXXXXXXGDSKATAKGSD 443
           TINGDDLLWAMATLGFEDYIEPLK+YLQKYREME               GDSK TAK SD
Sbjct: 89  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREME---------------GDSKLTAKSSD 133

Query: 442 GSVRKEAGVLHGGTQPGSSSQGMAQHVSFTQGMNYMHPQFHNGDLS 305
           GS++K+A + H G    S++QGM Q  ++ QGM YM PQ+HNGD+S
Sbjct: 134 GSIKKDA-LGHVGAS-SSAAQGMGQQGAYNQGMGYMQPQYHNGDIS 177


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