BLASTX nr result

ID: Dioscorea21_contig00006668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006668
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268264.1| PREDICTED: protein TIC 22-like, chloroplasti...   263   4e-68
ref|XP_002301750.1| predicted protein [Populus trichocarpa] gi|2...   263   6e-68
ref|XP_003524917.1| PREDICTED: uncharacterized protein LOC100811...   251   1e-64
ref|XP_002883453.1| hypothetical protein ARALYDRAFT_479887 [Arab...   250   3e-64
ref|XP_004138357.1| PREDICTED: protein TIC 22-like, chloroplasti...   249   1e-63

>ref|XP_002268264.1| PREDICTED: protein TIC 22-like, chloroplastic [Vitis vinifera]
          Length = 293

 Score =  263 bits (673), Expect = 4e-68
 Identities = 145/264 (54%), Positives = 186/264 (70%), Gaps = 2/264 (0%)
 Frame = -2

Query: 961 HAMDNPFSSLKAHLQSTLHDLQSRAQHAFHSSIARFTPHSTLNNLPL-ARI-SFAVAQKD 788
           H  + PF   K H +ST+ +LQ+ A+ A                 P+ ARI         
Sbjct: 39  HFPNLPFDP-KTHFESTISNLQNHAKRALRCP----------GKAPVWARIRGDGGGMPA 87

Query: 787 SFIEERLAGVPVYALSNSAGEFVLVSSAGSGKSLGFFCFREEDAAALLDQMRSMNSDMKQ 608
           S IEERLAGVPVYALSNS+ EFVLVS   +GKSLG FC ++EDA  LL+QM+ M+  M+Q
Sbjct: 88  SAIEERLAGVPVYALSNSSDEFVLVSGVRTGKSLGLFCLKKEDAETLLEQMKLMDPGMRQ 147

Query: 607 GSKVVAVALNKVVQLKVDGVAFRFIPDSSQVANAIKEKGKIGESVDSFPGVPVFQSRSLV 428
           GSKVVAVALNKV QLK+DGVAFR +PDS+QV NA++   K G S D F GVPVFQSRSL+
Sbjct: 148 GSKVVAVALNKVFQLKLDGVAFRLMPDSTQVKNALRVMEKAGFSDDGFSGVPVFQSRSLI 207

Query: 427 LKSQNKRYRPVFFRMEDLDDSLYRASHEQSRLNPALRRGDLQVAVLEDIVGELKGNSASE 248
           L+SQ+K+YRPVFFR EDL++SL  AS++Q+RLNPA R+GD+QVAV E+I+  ++ N++ +
Sbjct: 208 LQSQDKKYRPVFFRKEDLENSLLSASNQQNRLNPAFRQGDIQVAVFEEIIKGMQENASRQ 267

Query: 247 WDDVVFVPPGLKLSSDLTQETSTA 176
           WDDVVF+PPG   S    Q+ +TA
Sbjct: 268 WDDVVFIPPGFDASISSPQQQATA 291


>ref|XP_002301750.1| predicted protein [Populus trichocarpa] gi|222843476|gb|EEE81023.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score =  263 bits (671), Expect = 6e-68
 Identities = 148/277 (53%), Positives = 194/277 (70%), Gaps = 20/277 (7%)
 Frame = -2

Query: 973 ETPEHAMDNPFSSLKAHLQSTLHDL-----------QSRAQHAFHSSIARFTPHSTLNNL 827
           ++P+  + + F++L+ H  + L +L           Q+ A+ +  + I+R  P+S L++ 
Sbjct: 18  QSPQIDLHHAFTTLQDHCSTFLQNLSHQFPLFNPNFQTHAKQSLDTLISRLNPNSPLSSK 77

Query: 826 -PL-ARISF------AVAQKDSFIEERLAGVPVYALSNSAGEFVLVSSAGSGKSLGFFCF 671
            PL ARI          +     IEERLAGVPVYALSNS  EFVLVS   +GKSLG FCF
Sbjct: 78  NPLWARIPHEPVIQPGTSMSTETIEERLAGVPVYALSNSNEEFVLVSGLSTGKSLGLFCF 137

Query: 670 REEDAAALLDQMRSMNSDMKQG-SKVVAVALNKVVQLKVDGVAFRFIPDSSQVANAIKEK 494
           ++EDA ALL+QM+SM+  M++G SKVV VALNKV QLKVDGVAFR IP+ SQV NA+ E+
Sbjct: 138 KQEDAEALLEQMKSMDPGMRKGGSKVVPVALNKVFQLKVDGVAFRLIPEPSQVKNALMER 197

Query: 493 GKIGESVDSFPGVPVFQSRSLVLKSQNKRYRPVFFRMEDLDDSLYRASHEQSRLNPALRR 314
            + G S D F GVPVFQSRSLVLKSQN+ YRPVFFR EDL+ SL RAS EQ ++NPA ++
Sbjct: 198 ERAGLSDDCFSGVPVFQSRSLVLKSQNRSYRPVFFRKEDLEKSLLRASREQHKVNPAFKQ 257

Query: 313 GDLQVAVLEDIVGELKGNSASEWDDVVFVPPGLKLSS 203
           GD++VAV E+I+  +K  SA+ WDDVVF+PPG  +S+
Sbjct: 258 GDIEVAVFEEIIKCMKEGSATTWDDVVFIPPGFDVST 294


>ref|XP_003524917.1| PREDICTED: uncharacterized protein LOC100811136 [Glycine max]
          Length = 253

 Score =  251 bits (642), Expect = 1e-64
 Identities = 132/249 (53%), Positives = 176/249 (70%), Gaps = 5/249 (2%)
 Frame = -2

Query: 919 QSTLHDLQSRAQHAFHSSIARFTPHSTLNNLPLARISFA-----VAQKDSFIEERLAGVP 755
           Q  L + Q R       S+ R  P+      P ARI+       +A     IEERL G+P
Sbjct: 8   QKALAEFQGRCSTLL-GSLTRLQPNRA--RPPWARIAQPWGGRPMAMTVEAIEERLEGIP 64

Query: 754 VYALSNSAGEFVLVSSAGSGKSLGFFCFREEDAAALLDQMRSMNSDMKQGSKVVAVALNK 575
           VYALSN++ EF+LVS + SGK+LG FCF ++DA ALL+Q+  ++   +QGSKVV VALNK
Sbjct: 65  VYALSNASEEFLLVSGSSSGKNLGLFCFNKDDAEALLNQVTLIDPHARQGSKVVPVALNK 124

Query: 574 VVQLKVDGVAFRFIPDSSQVANAIKEKGKIGESVDSFPGVPVFQSRSLVLKSQNKRYRPV 395
           V QLKV+GVAFR IP+ SQV NA++E+ K G +   F GVPVFQSRSL+LKSQNKR+RP+
Sbjct: 125 VFQLKVNGVAFRLIPEFSQVKNALQEREKSGFASSGFSGVPVFQSRSLILKSQNKRFRPL 184

Query: 394 FFRMEDLDDSLYRASHEQSRLNPALRRGDLQVAVLEDIVGELKGNSASEWDDVVFVPPGL 215
           FFR EDL+++L  A+ EQ++LNP +R+GD+QVA LED++ E+K NS S WDDV+F+PPG 
Sbjct: 185 FFRKEDLENTLKSAAREQNKLNPTMRKGDIQVATLEDVIKEMKENSTSNWDDVIFIPPGF 244

Query: 214 KLSSDLTQE 188
            +S D  ++
Sbjct: 245 DVSDDSNEQ 253


>ref|XP_002883453.1| hypothetical protein ARALYDRAFT_479887 [Arabidopsis lyrata subsp.
           lyrata] gi|297329293|gb|EFH59712.1| hypothetical protein
           ARALYDRAFT_479887 [Arabidopsis lyrata subsp. lyrata]
          Length = 314

 Score =  250 bits (639), Expect = 3e-64
 Identities = 146/275 (53%), Positives = 184/275 (66%), Gaps = 21/275 (7%)
 Frame = -2

Query: 949 NPFSSLKAHLQSTLHDLQSRAQHAFHSSIARFTPHSTLNNLPL-ARISFAVAQKDSF--- 782
           NP  +   ++ S L+ L+ +A+ A  S I+RF         P+ ARIS  V         
Sbjct: 44  NPNKNNNRNIFSALNSLRDQAKQALDSRISRFNS----GKAPVWARISDDVGGGGGARTQ 99

Query: 781 ----------------IEERLAGVPVYALSNSAGEFVLVSSAGSGKSLGFFCFREEDAAA 650
                           IEERLAGVPVYALSNS  EFVLVS   SGKSLG    +EEDA  
Sbjct: 100 VTAPVRGSGKGLTADAIEERLAGVPVYALSNSNEEFVLVSGTSSGKSLGLLFCKEEDAET 159

Query: 649 LLDQMRSMNSDM-KQGSKVVAVALNKVVQLKVDGVAFRFIPDSSQVANAIKEKGKIGESV 473
           LL QM+SM+  M K+GSKVVA+AL+KV QLKV+GVAFR IP+S+QV NA+KE+   G   
Sbjct: 160 LLKQMKSMDPRMRKEGSKVVALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDD 219

Query: 472 DSFPGVPVFQSRSLVLKSQNKRYRPVFFRMEDLDDSLYRASHEQSRLNPALRRGDLQVAV 293
           D F GVPVFQS+SL+L+S+N  YRPVFFR EDL+ SL RAS +Q+RLNPAL+ GD+QVAV
Sbjct: 220 DDFHGVPVFQSKSLILRSENMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAV 279

Query: 292 LEDIVGELKGNSASEWDDVVFVPPGLKLSSDLTQE 188
            EDIV  +K ++ S WDD+VF+PPG ++S++ TQE
Sbjct: 280 FEDIVKGMKESTTSNWDDIVFIPPGFEVSTEQTQE 314


>ref|XP_004138357.1| PREDICTED: protein TIC 22-like, chloroplastic-like [Cucumis
           sativus] gi|449496760|ref|XP_004160220.1| PREDICTED:
           protein TIC 22-like, chloroplastic-like [Cucumis
           sativus]
          Length = 301

 Score =  249 bits (635), Expect = 1e-63
 Identities = 135/267 (50%), Positives = 176/267 (65%), Gaps = 13/267 (4%)
 Frame = -2

Query: 961 HAMDNPFSSLKAHLQSTLHDLQS-RAQHAFHSSIARFT------------PHSTLNNLPL 821
           H + NP   LK  LQST   L + +     HS+I+               P +      L
Sbjct: 31  HNLSNPLP-LKTQLQSTFSTLLNPKPNPPLHSTISPSDSVPKKSPLWARLPETAKTQFTL 89

Query: 820 ARISFAVAQKDSFIEERLAGVPVYALSNSAGEFVLVSSAGSGKSLGFFCFREEDAAALLD 641
                +++     IE+RLAG+PVYALSN++ EFVLVS A + KSLG FCF+++DA  LL 
Sbjct: 90  PSAPSSLSLSTEAIEKRLAGIPVYALSNASEEFVLVSGASAQKSLGLFCFKKDDAETLLQ 149

Query: 640 QMRSMNSDMKQGSKVVAVALNKVVQLKVDGVAFRFIPDSSQVANAIKEKGKIGESVDSFP 461
            + +M+   + GSKVV VALNKV QL V+GVAFR IP+ SQV NA+ E+ K G S D F 
Sbjct: 150 HIGTMDPSARYGSKVVPVALNKVFQLNVNGVAFRLIPECSQVKNALTERKKAGISADGFS 209

Query: 460 GVPVFQSRSLVLKSQNKRYRPVFFRMEDLDDSLYRASHEQSRLNPALRRGDLQVAVLEDI 281
           GVPVFQS+SL+L+ QNK YRP FFR EDL++SL RAS EQ+++NPALR GD+QVAV E+I
Sbjct: 210 GVPVFQSKSLILRVQNKSYRPAFFRKEDLENSLQRASREQNQINPALRPGDIQVAVFEEI 269

Query: 280 VGELKGNSASEWDDVVFVPPGLKLSSD 200
           +  +K NS S WDD+VF+PPG  +S+D
Sbjct: 270 IKGMKDNSISTWDDIVFIPPGFDVSTD 296


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