BLASTX nr result
ID: Dioscorea21_contig00006635
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00006635 (665 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003524256.1| PREDICTED: putative clathrin assembly protei... 88 2e-15 emb|CBI21242.3| unnamed protein product [Vitis vinifera] 87 2e-15 ref|XP_002278174.1| PREDICTED: uncharacterized protein LOC100261... 87 2e-15 ref|XP_002533971.1| clathrin assembly protein, putative [Ricinus... 87 4e-15 gb|AAP34366.1| fiber protein Fb19 [Gossypium barbadense] 86 5e-15 >ref|XP_003524256.1| PREDICTED: putative clathrin assembly protein At4g40080-like [Glycine max] Length = 319 Score = 87.8 bits (216), Expect = 2e-15 Identities = 48/104 (46%), Positives = 64/104 (61%) Frame = +1 Query: 340 LSTLLSFGXXXXXXXXXXXXXXXXXXXXXXNASVALKSLLALHHLFIHGAFILRDQLSTA 519 L+TLLS G NA+VALK L+A+HH+ HG+FIL+DQLS Sbjct: 48 LATLLSSGDGSRATASAAVEVLMDRLQGTNNAAVALKCLIAVHHIIHHGSFILQDQLS-- 105 Query: 520 LSPSSGSRHPLHLSSFRDPSSPESWTMSSWVRWFAGVLELLLAS 651 + PS+G R+ L+LS+FR + P SW +SSWVRWFA +E LL + Sbjct: 106 VYPSAGGRNYLNLSNFRHNTDPTSWELSSWVRWFAQHIEQLLCT 149 >emb|CBI21242.3| unnamed protein product [Vitis vinifera] Length = 207 Score = 87.4 bits (215), Expect = 2e-15 Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 3/59 (5%) Frame = +3 Query: 72 MELHSPS---AGKRLWNFLRVAFYMMRKGLISKRKLIMDMNLMVKRGKLVGKKTLGNLM 239 ME+HSP GKRLWNFLR+ F+MMRKGLISKRKLIMDMNLM+KRGKL+ +KT GNLM Sbjct: 1 MEVHSPVNSVLGKRLWNFLRITFFMMRKGLISKRKLIMDMNLMMKRGKLL-RKTWGNLM 58 >ref|XP_002278174.1| PREDICTED: uncharacterized protein LOC100261750 [Vitis vinifera] Length = 208 Score = 87.4 bits (215), Expect = 2e-15 Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 3/59 (5%) Frame = +3 Query: 72 MELHSPS---AGKRLWNFLRVAFYMMRKGLISKRKLIMDMNLMVKRGKLVGKKTLGNLM 239 ME+HSP GKRLWNFLR+ F+MMRKGLISKRKLIMDMNLM+KRGKL+ +KT GNLM Sbjct: 2 MEVHSPVNSVLGKRLWNFLRITFFMMRKGLISKRKLIMDMNLMMKRGKLL-RKTWGNLM 59 >ref|XP_002533971.1| clathrin assembly protein, putative [Ricinus communis] gi|223526043|gb|EEF28409.1| clathrin assembly protein, putative [Ricinus communis] Length = 271 Score = 86.7 bits (213), Expect = 4e-15 Identities = 51/127 (40%), Positives = 75/127 (59%) Frame = +1 Query: 271 SPNLAVLRATXXXXXXXXXXXXXLSTLLSFGXXXXXXXXXXXXXXXXXXXXXXNASVALK 450 S +LA+LRAT ++T+LS+G ++SVA+K Sbjct: 33 SLHLALLRATTHDPFTPPNSKH-ITTVLSYGHSSRATAASAIEALMDRLQSTHDSSVAVK 91 Query: 451 SLLALHHLFIHGAFILRDQLSTALSPSSGSRHPLHLSSFRDPSSPESWTMSSWVRWFAGV 630 L+ +HH+ HG+FIL+DQLS + PS+G R+ L LSSFRD ++P +W +SSWVRW+A Sbjct: 92 CLIIVHHIIKHGSFILQDQLS--VYPSTGGRNYLKLSSFRDNTTPLTWELSSWVRWYARY 149 Query: 631 LELLLAS 651 LE LL++ Sbjct: 150 LEHLLST 156 >gb|AAP34366.1| fiber protein Fb19 [Gossypium barbadense] Length = 351 Score = 86.3 bits (212), Expect = 5e-15 Identities = 52/128 (40%), Positives = 74/128 (57%) Frame = +1 Query: 268 ISPNLAVLRATXXXXXXXXXXXXXLSTLLSFGXXXXXXXXXXXXXXXXXXXXXXNASVAL 447 +S +LA+LRAT L+TLLSFG +ASVA+ Sbjct: 25 LSLHLALLRATTHDPFSPPDPTH-LATLLSFGHCSRATASTAVDAIMDRLQTTRDASVAI 83 Query: 448 KSLLALHHLFIHGAFILRDQLSTALSPSSGSRHPLHLSSFRDPSSPESWTMSSWVRWFAG 627 K L+ +HH+ G+FIL+DQ S + PS+G R+ L LS+FRD ++P +W +SSWVRW+A Sbjct: 84 KCLITVHHIIKRGSFILQDQFS--VYPSTGGRNYLKLSNFRDDTTPLTWELSSWVRWYAL 141 Query: 628 VLELLLAS 651 LE LL++ Sbjct: 142 YLENLLST 149