BLASTX nr result

ID: Dioscorea21_contig00006635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006635
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524256.1| PREDICTED: putative clathrin assembly protei...    88   2e-15
emb|CBI21242.3| unnamed protein product [Vitis vinifera]               87   2e-15
ref|XP_002278174.1| PREDICTED: uncharacterized protein LOC100261...    87   2e-15
ref|XP_002533971.1| clathrin assembly protein, putative [Ricinus...    87   4e-15
gb|AAP34366.1| fiber protein Fb19 [Gossypium barbadense]               86   5e-15

>ref|XP_003524256.1| PREDICTED: putative clathrin assembly protein At4g40080-like
           [Glycine max]
          Length = 319

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 48/104 (46%), Positives = 64/104 (61%)
 Frame = +1

Query: 340 LSTLLSFGXXXXXXXXXXXXXXXXXXXXXXNASVALKSLLALHHLFIHGAFILRDQLSTA 519
           L+TLLS G                      NA+VALK L+A+HH+  HG+FIL+DQLS  
Sbjct: 48  LATLLSSGDGSRATASAAVEVLMDRLQGTNNAAVALKCLIAVHHIIHHGSFILQDQLS-- 105

Query: 520 LSPSSGSRHPLHLSSFRDPSSPESWTMSSWVRWFAGVLELLLAS 651
           + PS+G R+ L+LS+FR  + P SW +SSWVRWFA  +E LL +
Sbjct: 106 VYPSAGGRNYLNLSNFRHNTDPTSWELSSWVRWFAQHIEQLLCT 149


>emb|CBI21242.3| unnamed protein product [Vitis vinifera]
          Length = 207

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 3/59 (5%)
 Frame = +3

Query: 72  MELHSPS---AGKRLWNFLRVAFYMMRKGLISKRKLIMDMNLMVKRGKLVGKKTLGNLM 239
           ME+HSP     GKRLWNFLR+ F+MMRKGLISKRKLIMDMNLM+KRGKL+ +KT GNLM
Sbjct: 1   MEVHSPVNSVLGKRLWNFLRITFFMMRKGLISKRKLIMDMNLMMKRGKLL-RKTWGNLM 58


>ref|XP_002278174.1| PREDICTED: uncharacterized protein LOC100261750 [Vitis vinifera]
          Length = 208

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 45/59 (76%), Positives = 51/59 (86%), Gaps = 3/59 (5%)
 Frame = +3

Query: 72  MELHSPS---AGKRLWNFLRVAFYMMRKGLISKRKLIMDMNLMVKRGKLVGKKTLGNLM 239
           ME+HSP     GKRLWNFLR+ F+MMRKGLISKRKLIMDMNLM+KRGKL+ +KT GNLM
Sbjct: 2   MEVHSPVNSVLGKRLWNFLRITFFMMRKGLISKRKLIMDMNLMMKRGKLL-RKTWGNLM 59


>ref|XP_002533971.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223526043|gb|EEF28409.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 271

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 51/127 (40%), Positives = 75/127 (59%)
 Frame = +1

Query: 271 SPNLAVLRATXXXXXXXXXXXXXLSTLLSFGXXXXXXXXXXXXXXXXXXXXXXNASVALK 450
           S +LA+LRAT             ++T+LS+G                      ++SVA+K
Sbjct: 33  SLHLALLRATTHDPFTPPNSKH-ITTVLSYGHSSRATAASAIEALMDRLQSTHDSSVAVK 91

Query: 451 SLLALHHLFIHGAFILRDQLSTALSPSSGSRHPLHLSSFRDPSSPESWTMSSWVRWFAGV 630
            L+ +HH+  HG+FIL+DQLS  + PS+G R+ L LSSFRD ++P +W +SSWVRW+A  
Sbjct: 92  CLIIVHHIIKHGSFILQDQLS--VYPSTGGRNYLKLSSFRDNTTPLTWELSSWVRWYARY 149

Query: 631 LELLLAS 651
           LE LL++
Sbjct: 150 LEHLLST 156


>gb|AAP34366.1| fiber protein Fb19 [Gossypium barbadense]
          Length = 351

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 52/128 (40%), Positives = 74/128 (57%)
 Frame = +1

Query: 268 ISPNLAVLRATXXXXXXXXXXXXXLSTLLSFGXXXXXXXXXXXXXXXXXXXXXXNASVAL 447
           +S +LA+LRAT             L+TLLSFG                      +ASVA+
Sbjct: 25  LSLHLALLRATTHDPFSPPDPTH-LATLLSFGHCSRATASTAVDAIMDRLQTTRDASVAI 83

Query: 448 KSLLALHHLFIHGAFILRDQLSTALSPSSGSRHPLHLSSFRDPSSPESWTMSSWVRWFAG 627
           K L+ +HH+   G+FIL+DQ S  + PS+G R+ L LS+FRD ++P +W +SSWVRW+A 
Sbjct: 84  KCLITVHHIIKRGSFILQDQFS--VYPSTGGRNYLKLSNFRDDTTPLTWELSSWVRWYAL 141

Query: 628 VLELLLAS 651
            LE LL++
Sbjct: 142 YLENLLST 149


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