BLASTX nr result

ID: Dioscorea21_contig00006634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006634
         (2271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   768   0.0  
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   734   0.0  
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   712   0.0  
ref|NP_001047292.1| Os02g0592300 [Oryza sativa Japonica Group] g...   706   0.0  
ref|XP_003575262.1| PREDICTED: mismatch repair endonuclease PMS2...   705   0.0  

>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  768 bits (1982), Expect = 0.0
 Identities = 433/797 (54%), Positives = 542/797 (68%), Gaps = 41/797 (5%)
 Frame = +3

Query: 3    NEPVGTHLTFDHSGLVRAETKTARQVGTTVTVEKLFSTLPVRSKEFKRNIRREYGKLISL 182
            NE V THLTFDHSGL+R E KTARQ+GTTVTV+KLFS LPVRSKEF RNIR+EYGKLISL
Sbjct: 125  NESVATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISL 184

Query: 183  LNAYALIAKGVRLLCANTTGKNMKSVVLKTQGTGSLKDNIITIFGLNTFRCLEPLTLGLS 362
            L+AYALIA GVRL+C NTTGKN+KS+VLKTQG+GSLKDNIIT+FG+NTF CLEPL + LS
Sbjct: 185  LSAYALIAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPLNICLS 244

Query: 363  EGLKVEGFISKPGQGSGRTLGDRQFFYVNGRPVDMPKVGKLINELYKCSNAKQYPVAIID 542
            +  KV+GF+SK G GSGRTLGDRQFF+VNGRPVDMPKVGKL+NELYK +N++QYP+AI++
Sbjct: 245  DSSKVDGFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPIAIMN 304

Query: 543  FIIPTASYDVNVTPDKRKIFFADEGCIMLPLREALEKMYSPHQCTYSINKIKESEKAADS 722
            F +PT +YDVNVTPDKRKIFF+DEG I+  LRE LEK+YSP   +YS+N+ +E  +  D+
Sbjct: 305  FTVPTRAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETDN 364

Query: 723  FRSNAPQEGGDLSVVSEPFSPEGDEQIEASPNQDTDADE----MFHETVPMQHPVKFGNK 890
               N PQ    LS   + F    D Q EA   +    D+    M   +    H VK  + 
Sbjct: 365  SELNPPQT-QILSSSKQLFPDGSDLQEEAHSEEQITEDQIPSKMVKSSTENMHAVKEMDH 423

Query: 891  GSVPADGSPPKDFSLNACGINKPESLYAYKHKRPRNFLEPNGKTAERTMRNLKSL----- 1055
             S   D S  KDFSL   GI K +S    K    +  +  N  T +  + +L  +     
Sbjct: 424  -SYDKD-SIEKDFSLRVHGIKKADSF--PKWDSEKTTMTINSDTIDHQVLSLSEMVVKGA 479

Query: 1056 -----------------KKDSPSHSNLVQSSLAKFTVVNNKKNESCSSVLSEMPLLRNAN 1184
                              K S SHS+  QSSL+KF  VN +K+E+ S+VLSE PLLRN  
Sbjct: 480  VGNKGSSSHSSYIQSFGNKGSSSHSSYFQSSLSKFVTVNKRKHENISTVLSEAPLLRNQT 539

Query: 1185 SN-PVRKSHLDVCNTVSRSFLENIPRIDSP---EASIEKLSDDPKPFDNSDRMETSLSVQ 1352
             N  ++K++ ++   VSRSF+ +    DS    E+   K       FD ++    S    
Sbjct: 540  PNCQLKKNNSEMHALVSRSFVNHQKTNDSAGIIESEPSKFLGVDSAFDATENPHYS---G 596

Query: 1353 SDIHDEMVTEEKSEKQEEQIPVTDATSEAFASKNISTTDVS-----------FDSPRRRS 1499
             +I+DE   E+  E  E  +P  D  + A  S+  + +D+S            D+P   S
Sbjct: 597  GNINDEKAGED-LENHETPLPPADVATTASLSEEKNISDLSGVASAVQDTPVLDTPMPSS 655

Query: 1500 DPIVLSSFQFSMSDLRSRRHQINSRSNLRTFTDEQKRHGRCYAAATLENSQPETDEGKTH 1679
            D  + S+ QFS  +LR+RRHQ                  RCY+AATLE SQPE +E K  
Sbjct: 656  DLKICSTLQFSFEELRTRRHQ------------------RCYSAATLEFSQPENEERKVR 697

Query: 1680 SLAEATRELEKLFRKEDFGRMQVVGQFNLGFIIGKLDQELFIVDQHAADEKHNFELLSRT 1859
            +LA AT ELEKLF+K+DFGRM+V+GQFNLGFIIGKLDQ+LFIVDQHAADEK+NFE L+++
Sbjct: 698  ALAAATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQS 757

Query: 1860 TVLKQQPLIQPIRLELSPEEEIVASMNMETIRKNGFILTEDTNAPPGRRFLLKAVPFSGN 2039
            TVL QQPL++P+RL+LSPEEE++AS++M+ IRKNGF L ED +APPG+RF LKAVPFS N
Sbjct: 758  TVLNQQPLLRPLRLDLSPEEEVIASIHMDIIRKNGFALEEDLHAPPGQRFKLKAVPFSKN 817

Query: 2040 ITFGTEDVKELISNLADSKEECSIISSYKLDTCDSICPSRVRAMLASRACRTSVMIGDSL 2219
            ITFG EDVKELIS LAD + ECSI+ +YK+DTCDSICPSRVRAMLASRACR+SVMIGD L
Sbjct: 818  ITFGVEDVKELISTLADGQGECSILGTYKMDTCDSICPSRVRAMLASRACRSSVMIGDPL 877

Query: 2220 TKSEMQKIVNNLSKLKS 2270
             + EMQ+I+ +LS LKS
Sbjct: 878  GRKEMQRILEHLSDLKS 894


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score =  734 bits (1896), Expect = 0.0
 Identities = 415/772 (53%), Positives = 527/772 (68%), Gaps = 16/772 (2%)
 Frame = +3

Query: 3    NEPVGTHLTFDHSGLVRAETKTARQVGTTVTVEKLFSTLPVRSKEFKRNIRREYGKLISL 182
            NEPV THLTF+HSGL+ AE KTARQVGTTVTV+KLFS+LPVRSKEF RNIR+EYGKLISL
Sbjct: 121  NEPVATHLTFNHSGLLTAERKTARQVGTTVTVKKLFSSLPVRSKEFSRNIRKEYGKLISL 180

Query: 183  LNAYALIAKGVRLLCANTTGKNMKSVVLKTQGTGSLKDNIITIFGLNTFRCLEPLTLGLS 362
            LNAYALI+KGVR++C+NTTGKN KSVVLKTQG+ SLKDNIIT+FG+NTF CLEP+ + +S
Sbjct: 181  LNAYALISKGVRIVCSNTTGKNAKSVVLKTQGSDSLKDNIITVFGVNTFSCLEPVDIDIS 240

Query: 363  EGLKVEGFISKPGQGSGRTLGDRQFFYVNGRPVDMPKVGKLINELYKCSNAKQYPVAIID 542
               KVEGF+SK GQGSGR LGDRQ+++VNGRPVDMPKV KL+NELYK +N++QYP+AI++
Sbjct: 241  GSCKVEGFLSKSGQGSGRNLGDRQYYFVNGRPVDMPKVSKLVNELYKGANSRQYPIAIMN 300

Query: 543  FIIPTASYDVNVTPDKRKIFFADEGCIMLPLREALEKMYSPHQCTYSINKIKESEKAADS 722
            F IPT + DVNVTPDKRKIFF+DE  I+L LRE LEK YS     YS+NK +   KAADS
Sbjct: 301  FTIPTTACDVNVTPDKRKIFFSDESSILLALREGLEKNYSSSNSCYSVNKFENHAKAADS 360

Query: 723  FRSNAPQEGGDLSVVSEPFSPEGDEQIEASPNQDTDADEMFHETVPMQHPVKFGNKGSVP 902
             +  +P+E  ++  +S+  S  G++  E   + +  +  M  E      P + G +    
Sbjct: 361  SQLCSPREKSNM--LSKQSSANGNDSEETQTDAEDSSPLMTVEV--KSKPFQVGERSIHD 416

Query: 903  ADGS-PPKDFSLNACGINKPESLYAYKHKRPRNFLE-PNGKTAERTMRNLKSLKKDSPSH 1076
             +     KDF+L   GI K +SL      +    L     + A+   R ++ +K DS   
Sbjct: 417  IEEKFMMKDFALRLHGIKKTDSLTNSNSCKATTHLNIVTDQNAQCPSRVVERVKGDSNGP 476

Query: 1077 SNLVQSSLAKFTVVNNKKNESCSSVLSEMPLLRNANSN-PVRKSHLDVCNTVSRSFLENI 1253
            S   QS L+ F  VN +K E  ++ LSE+P+LRN  S   ++KS +D+ + V+ S L N 
Sbjct: 477  SGSFQSKLSNFLTVNKRKREDITTQLSEVPVLRNQTSECQLKKSDIDIHDAVT-SLLFNH 535

Query: 1254 PRIDSPEASIEKLSDDPKPFDNSD----RMETSLSVQSDIHDEMVTEEKSEKQEEQIPVT 1421
              ID    S E    +P    ++D    +   +  +Q  + ++   E+ S   ++   +T
Sbjct: 536  HHIDD---STEFTDAEPPKHHSTDVIINKTRNNSGLQPKLAEDPSGEQNSSSPDDVPSIT 592

Query: 1422 DATSE--------AFASKNISTTDVSFDSPRRRSDPIVLSSFQFSMSDLRSRRHQINSRS 1577
                           AS    ++    D+P   S   + S+ QFS  DL SRR Q  SR 
Sbjct: 593  TPCKGLGNLLEDLPVASPPAQSSIELLDAPVPFSAQQICSTLQFSFQDLHSRRMQRLSRL 652

Query: 1578 NLRTFT-DEQKRHGRCYAAATLENSQPETDEGKTHSLAEATRELEKLFRKEDFGRMQVVG 1754
                FT    KR  R YAAATLE SQP+ +E K  +LA AT ELE+LFRKEDFGRM+V+G
Sbjct: 653  QSGKFTFGGSKRSHRSYAAATLELSQPDNEERKLRALAAATTELERLFRKEDFGRMKVIG 712

Query: 1755 QFNLGFIIGKLDQELFIVDQHAADEKHNFELLSRTTVLKQQPLIQPIRLELSPEEEIVAS 1934
            QFNLGFIIGKLDQ+LFIVDQHAADEK+NFE L ++T+L QQPL++P+RLELSPEEE+VAS
Sbjct: 713  QFNLGFIIGKLDQDLFIVDQHAADEKYNFERLCQSTILNQQPLLRPLRLELSPEEEVVAS 772

Query: 1935 MNMETIRKNGFILTEDTNAPPGRRFLLKAVPFSGNITFGTEDVKELISNLADSKEECSII 2114
            MN++ IRKNGF L ED +A PG  F LKAVPFS NITFG EDVK+LIS LADS+ ECSII
Sbjct: 773  MNLDIIRKNGFALEEDPHALPGHHFKLKAVPFSKNITFGVEDVKDLISTLADSQGECSII 832

Query: 2115 SSYKLDTCDSICPSRVRAMLASRACRTSVMIGDSLTKSEMQKIVNNLSKLKS 2270
            S YK+DT DS+CPSRV AM ASRACR+SVMIGD+L ++EMQKI+ +L  LKS
Sbjct: 833  SRYKMDTADSVCPSRVHAMFASRACRSSVMIGDALGRNEMQKILEHLVDLKS 884


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
            gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
            pms2, putative [Ricinus communis]
          Length = 924

 Score =  712 bits (1839), Expect = 0.0
 Identities = 403/782 (51%), Positives = 531/782 (67%), Gaps = 26/782 (3%)
 Frame = +3

Query: 3    NEPVGTHLTFDHSGLVRAETKTARQVGTTVTVEKLFSTLPVRSKEFKRNIRREYGKLISL 182
            NE V THL++D SGL+ AE KTARQ+GTTVTV+KLFS LPVRSKEF RNIR+EYGKLISL
Sbjct: 122  NESVATHLSYDRSGLLTAEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISL 181

Query: 183  LNAYALIAKGVRLLCANTTGKNMKSVVLKTQGTGSLKDNIITIFGLNTFRCLEPLTLGLS 362
            LNAYALIAKGVRLLC NTTG+N K VVLKTQGT SLKDNIIT+FG++TF CLEP+++ +S
Sbjct: 182  LNAYALIAKGVRLLCTNTTGRNAKIVVLKTQGTDSLKDNIITVFGMSTFSCLEPVSICIS 241

Query: 363  EGLKVEGFISKPGQGSGRTLGDRQFFYVNGRPVDMPKVGKLINELYKCSNAKQYPVAIID 542
            +  KV+GF+SKPGQGSGR LGDRQ+++VNGRPVDMPKV KL+NELY+ +N++QYP+AI++
Sbjct: 242  DCCKVDGFLSKPGQGSGRNLGDRQYYFVNGRPVDMPKVTKLVNELYRGANSRQYPIAIMN 301

Query: 543  FIIPTASYDVNVTPDKRKIFFADEGCIMLPLREALEKMYSPHQCTYSINKIKESEKAADS 722
            FI+PT + DVNVTPDKRKIFF+DE  I+  LRE L+ +YSP   +YS+NK +E  KAA +
Sbjct: 302  FIVPTRACDVNVTPDKRKIFFSDETSILHALREGLQNIYSPSNASYSVNKFEERIKAASN 361

Query: 723  FRSNAPQEGGDLSVVSEPFSPEGDEQIEASPNQDTDADEMFHETVPMQ-HPVKFGNKGSV 899
             +S +P E     V+S+  S   ++  E    + T       +TV M+ HP    N G  
Sbjct: 362  SQSCSPHEKS--LVLSKQLSAVSNDAEEILVEEHTSDGSNLLQTVKMKSHP---SNVGEN 416

Query: 900  PADGSPPKDFSLNACGINKPESLYAYKHKRPR-------NFLEPNGKTAERTMRNLKSLK 1058
              +    KDF+L    I K   +Y++ +   R          + N  +  R +    +  
Sbjct: 417  RDEKRISKDFTLRVHDIPK---VYSFPNSNNRQLTTLHDTLTDQNTPSPSRVVAKNIAES 473

Query: 1059 KDSPSHSNLVQSSLAKFTVVNNKKNESCS-SVLSEMPLLRNAN-SNPVRKSHLDVCNTVS 1232
            + S S S  VQS+++KF  V+ +K++  S + LSE+P+LRN     P+ KS+ +V   V+
Sbjct: 474  RGSNSSSRSVQSTISKFVTVSKRKHDDISTTTLSEIPILRNQTLQRPLNKSNSEVNAAVT 533

Query: 1233 RSFLENIPRIDSPEASIEKLSDDPKPFDNSDRMETSLSVQSDIHDEMVTEEKSEKQEEQI 1412
             S   +    DS E S  ++S  P       ++  S S +   +D    ++ SE  E+  
Sbjct: 534  GSPFNHHHIDDSLEVSDIEVSKFPTAEKIFSKVRNSASYRGHTNDGK-PKDDSEGAEKLS 592

Query: 1413 PVTDATSEAFASKNIS--TTDVSFDSPRRRSDPIVL-----------SSFQFSMSDLRSR 1553
             + D   +   S+ +   + D+   +P  +S   +L           S+ QF+  +L+++
Sbjct: 593  FIADVAPDTSPSRGLENMSEDLILTAPPLQSSSALLDVPKPSAHEICSTLQFNFQELKAK 652

Query: 1554 RHQINSRSNLRTFTD---EQKRHGRCYAAATLENSQPETDEGKTHSLAEATRELEKLFRK 1724
            R Q  S      +     + K H R YAAATLE SQP+ +E K  +LA AT ELE++FRK
Sbjct: 653  RQQRRSILQFSGYASGGMKMKSH-RTYAAATLELSQPDNEERKARALAAATTELERIFRK 711

Query: 1725 EDFGRMQVVGQFNLGFIIGKLDQELFIVDQHAADEKHNFELLSRTTVLKQQPLIQPIRLE 1904
            +DFGRM+V+GQFNLGFIIGKLDQ+LFIVDQHAADEK+NFE L ++T+L QQPL++ +RLE
Sbjct: 712  QDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLCQSTILNQQPLLRSLRLE 771

Query: 1905 LSPEEEIVASMNMETIRKNGFILTEDTNAPPGRRFLLKAVPFSGNITFGTEDVKELISNL 2084
            LSPEEE+VASMNME IRKNGF L ED +APPG RF LKAVPFS NITFG EDVK+LIS L
Sbjct: 772  LSPEEEVVASMNMELIRKNGFALEEDPHAPPGHRFKLKAVPFSKNITFGVEDVKDLISTL 831

Query: 2085 ADSKEECSIISSYKLDTCDSICPSRVRAMLASRACRTSVMIGDSLTKSEMQKIVNNLSKL 2264
            ADS+ +CSII SYK+D  DS+CPSRVR MLASRACR+SVMIGD L ++EMQKI+ +L+ L
Sbjct: 832  ADSQGDCSIIGSYKMDKSDSVCPSRVRTMLASRACRSSVMIGDPLGRNEMQKILEHLADL 891

Query: 2265 KS 2270
             S
Sbjct: 892  NS 893


>ref|NP_001047292.1| Os02g0592300 [Oryza sativa Japonica Group]
            gi|50726475|dbj|BAD34084.1| putative PMS2 postmeiotic
            segregation increased 2 [Oryza sativa Japonica Group]
            gi|113536823|dbj|BAF09206.1| Os02g0592300 [Oryza sativa
            Japonica Group] gi|218191082|gb|EEC73509.1| hypothetical
            protein OsI_07875 [Oryza sativa Indica Group]
            gi|222623151|gb|EEE57283.1| hypothetical protein
            OsJ_07338 [Oryza sativa Japonica Group]
          Length = 923

 Score =  706 bits (1822), Expect = 0.0
 Identities = 405/784 (51%), Positives = 516/784 (65%), Gaps = 28/784 (3%)
 Frame = +3

Query: 3    NEPVGTHLTFDHSGLVRAETKTARQVGTTVTVEKLFSTLPVRSKEFKRNIRREYGKLISL 182
            +EPVGT L F HSG+V  E K AR VGT VTVEKLFSTLPVRSKEF RNIR+EYGK+ISL
Sbjct: 122  DEPVGTRLEFAHSGVVTGERKMARPVGTAVTVEKLFSTLPVRSKEFSRNIRKEYGKVISL 181

Query: 183  LNAYALIAKGVRLLCANTTGKNMKSVVLKTQGTGSLKDNIITIFGLNTFRCLEPLTLGLS 362
            LNAYALIAKGVRL+C NT GKN KS VL+TQG+ SLKDNIIT+FGLNTF+CL+P  + +S
Sbjct: 182  LNAYALIAKGVRLVCTNTVGKNSKSAVLRTQGSSSLKDNIITVFGLNTFKCLQPFNVTIS 241

Query: 363  EGLKVEGFISKPGQGSGRTLGDRQFFYVNGRPVDMPKVGKLINELYKCSNAKQYPVAIID 542
            EG +V+GF+SKPG GSGR  GDRQFFYVNGRPVDMPKV KL+NELY+ SNAKQYPVA+++
Sbjct: 242  EGCQVDGFLSKPGPGSGRNSGDRQFFYVNGRPVDMPKVSKLVNELYRSSNAKQYPVAVLN 301

Query: 543  FIIPTASYDVNVTPDKRKIFFADEGCIMLPLREALEKMYSPHQCTYSINKIKESEKAADS 722
            F IPT SYDVNV PDKRKIFF+ E  I+L LRE +E +Y P QC++SIN +++  K  D 
Sbjct: 302  FCIPTTSYDVNVAPDKRKIFFSSEHAILLSLREGIENLYCPQQCSFSINSVEDPGKEMDP 361

Query: 723  FRSNAPQEGGDLSVVSEPFSPEGDEQIEASPNQDTDADEMFHETVPMQHPVKFGNKGSVP 902
               +   E   L+      +PE D+ ++     +TD+D+   E  P    V       V 
Sbjct: 362  -AIDGSDEDMCLTEKENVSAPENDDDMD-----ETDSDD---EVTPENQKVPSSVTTRV- 411

Query: 903  ADGSPPKDFSLNACG----INKPESLYAYKHKRPRNFLEPNGKTAERTMRNLKSLKKDSP 1070
            A GS PKD S  + G    +++   L AY++++ R       K+      ++++      
Sbjct: 412  ATGSTPKDVSPLSRGPPAQLDRSTLLSAYRYEQ-REKTPTRVKSYPAQANHVRTGLAAKS 470

Query: 1071 SHSNLVQSSLAKFTVVNNKKNESCSSVLSEMPLLRNANS-NPVRKSHLDVCN-TVSRSFL 1244
            S S+ VQ S+ KF   N +K+E   +++SE P+LR       VR++ L V + T   S +
Sbjct: 471  SPSSAVQPSIMKFLSQNKRKHEDSCNLISEAPVLRRGTCLEQVRRTDLGVNSPTALTSRV 530

Query: 1245 ENIPRIDSPEAS------------IEKLSDDPK----PFDNSDRMETSLSVQSDIH-DEM 1373
             NIP +++P+ +             E   D P+    P   S R E       D+H  E 
Sbjct: 531  SNIPEVNAPQGTNPLRHHSLQSFVPEMPEDSPQHSEPPNIVSHRDEVPQLRPCDVHATES 590

Query: 1374 VTEEKSEKQEEQIPVTDATSEAFASK---NISTTDVSFD--SPRRRSDPIVLSSFQFSMS 1538
              + + +    +       SE        NIS  D  +D       S        QF+++
Sbjct: 591  EVDNQHDPCHSKFGAPSRCSEVEPQNKLTNISLPDAHYDGHDTAAHSGQSSYPVMQFTLA 650

Query: 1539 DLRSRRHQINSRSNLRTFTDEQKRHGRCYAAATLENSQPETDEGKTHSLAEATRELEKLF 1718
            DLR RR      S+ +  +  +K   RCY AATL+N  P+ +EGK++SLA AT EL+KLF
Sbjct: 651  DLRRRRRHSFMISHAKKGSFPEK-STRCYKAATLDNYVPDNEEGKSNSLAAATSELDKLF 709

Query: 1719 RKEDFGRMQVVGQFNLGFIIGKLDQELFIVDQHAADEKHNFELLSRTTVLKQQPLIQPIR 1898
             K+DFG M+VVGQFNLGFIIGKLDQ+LFIVDQHAADEK+NFE LS++T L  QPL+QP+R
Sbjct: 710  SKDDFGEMEVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFENLSQSTTLNIQPLLQPLR 769

Query: 1899 LELSPEEEIVASMNMETIRKNGFILTEDTNAPPGRRFLLKAVPFSGNITFGTEDVKELIS 2078
            L+LSPEEE++ SMNM TIRKNGF+L ED +A P  R+ +KAVPFS NITFG +DVKELIS
Sbjct: 770  LDLSPEEEVIVSMNMSTIRKNGFVLAEDLHASPCNRYFIKAVPFSKNITFGAQDVKELIS 829

Query: 2079 NLADSKEECSIISSYKLDTCDSICPSRVRAMLASRACRTSVMIGDSLTKSEMQKIVNNLS 2258
             LADS+ +CSIISSYKLD  DSICPSRVRAMLASRACR S MIGD LTK+EM+KI+ NL+
Sbjct: 830  MLADSQGDCSIISSYKLDRTDSICPSRVRAMLASRACRMSTMIGDPLTKTEMKKILKNLT 889

Query: 2259 KLKS 2270
             L+S
Sbjct: 890  GLRS 893


>ref|XP_003575262.1| PREDICTED: mismatch repair endonuclease PMS2-like [Brachypodium
            distachyon]
          Length = 921

 Score =  705 bits (1820), Expect = 0.0
 Identities = 408/805 (50%), Positives = 518/805 (64%), Gaps = 49/805 (6%)
 Frame = +3

Query: 3    NEPVGTHLTFDHSGLVRAETKTARQVGTTVTVEKLFSTLPVRSKEFKRNIRREYGKLISL 182
            +E VGTHL F+HSG+V +  K ARQVGTTVT+EKLFSTLPVR KEF RNIR+EYGK+ISL
Sbjct: 121  DESVGTHLEFEHSGVVISNRKIARQVGTTVTIEKLFSTLPVRGKEFSRNIRKEYGKVISL 180

Query: 183  LNAYALIAKGVRLLCANTTGKNMKSVVLKTQGTGSLKDNIITIFGLNTFRCLEPLTLGLS 362
            LNAYALIAKGVRLLC NT GKN K VVLKTQG+ SLKDNIIT+FGLNTF+CLEP  + + 
Sbjct: 181  LNAYALIAKGVRLLCTNTVGKNSKMVVLKTQGSSSLKDNIITVFGLNTFKCLEPFNVTIL 240

Query: 363  EGLKVEGFISKPGQGSGRTLGDRQFFYVNGRPVDMPKVGKLINELYKCSNAKQYPVAIID 542
            EG +VEGF+SKPG GSGR  GDRQFFYVNGRPVDMPKV KL+NELYK SN+KQYPVA+++
Sbjct: 241  EGCQVEGFLSKPGPGSGRNSGDRQFFYVNGRPVDMPKVTKLVNELYKSSNSKQYPVAVLN 300

Query: 543  FIIPTASYDVNVTPDKRKIFFADEGCIMLPLREALEKMYSPHQCTYSINKIKESEKAADS 722
            F IPT SYDVNV PDKRKIFF+ E  I+L LREA+E +Y+P QC++SIN I++ EK  D 
Sbjct: 301  FCIPTTSYDVNVAPDKRKIFFSSEQTILLSLREAIENLYNPQQCSFSINLIEDPEKEVDP 360

Query: 723  FRSNAPQEGGDLSVVSEPFSPEGDEQIEASPNQDTDADEMFHETVPMQHPVKFG------ 884
               + P E  DL       SP  D+        +TD+D+   + +P      F       
Sbjct: 361  -AIDEPHESTDLIETGNVSSPRNDDD-----KDETDSDD---QDLPQNQKASFSARRVAV 411

Query: 885  -----NKGSVPADGSPPKDFSLNACGINKPESLYAYKHKRPRNF-----LEPNGKTAERT 1034
                 ++  +P D + P D S           L  ++H++P+ F       P G   +RT
Sbjct: 412  GTASKDRSPLPGDPATPVDRSW----------LSEFQHEQPKVFHAQVKKNPAGSYHDRT 461

Query: 1035 MRNLKSLKKDSPSHSNLVQSSLAKFTVVNNKKNESCSSVLSEMPLLRNAN-SNPVRKSHL 1211
                KS      S S  VQSSL+ F  +N +K+E   ++LSE P+LR    S  VR++  
Sbjct: 462  GLAAKS------SPSTTVQSSLSNFLSLNKRKHEDSCNLLSEAPVLRRGTCSGQVRRTSS 515

Query: 1212 DVCN-TVSRSFLENIPRIDSPE---------------------------ASIEKLSDDPK 1307
            +    T+  S    IP ++S +                            +IE  S +  
Sbjct: 516  ETSTPTILISGTSGIPNVNSDQETSPLRHHSPQSFLPKRTEVSPHHSEPPNIESHSTETP 575

Query: 1308 PFDNSDRMETSLSV--QSDIHDE--MVTEEKSEKQEEQIPVTDATSEAFASKNISTTDVS 1475
            P D      T   V  Q+D H+      ++ SE +   IP+ DA      +  + +T VS
Sbjct: 576  PLDPCSIPSTKSYVDQQNDQHNSNFAAPDKYSEVEPINIPLPDACGHDNGT-TVCSTSVS 634

Query: 1476 FDSPRRRSDPIVLSSFQFSMSDLRSRRHQINSRSNLRTFTDEQKRHGRCYAAATLENSQP 1655
            +        P++    QF++++LR RR    + S+ +      K   R Y AATL+N  P
Sbjct: 635  Y--------PVM----QFTVAELRRRRKYSFTVSHKKGVYCSNKT-ARFYKAATLDNYVP 681

Query: 1656 ETDEGKTHSLAEATRELEKLFRKEDFGRMQVVGQFNLGFIIGKLDQELFIVDQHAADEKH 1835
              DEGK++ LA AT EL++LF K++FG M+VVGQFNLGFIIGKLDQ+LFIVDQHAADEK+
Sbjct: 682  NDDEGKSNYLAAATNELDRLFSKDNFGEMEVVGQFNLGFIIGKLDQDLFIVDQHAADEKY 741

Query: 1836 NFELLSRTTVLKQQPLIQPIRLELSPEEEIVASMNMETIRKNGFILTEDTNAPPGRRFLL 2015
            NFE LS++T L  QPL+ P+RLELSPEEE++ SMNM TIRKNGF+L ED +A PG  +LL
Sbjct: 742  NFESLSQSTTLNIQPLLHPLRLELSPEEEVIVSMNMTTIRKNGFVLAEDLHASPGNHYLL 801

Query: 2016 KAVPFSGNITFGTEDVKELISNLADSKEECSIISSYKLDTCDSICPSRVRAMLASRACRT 2195
            KAVPFS NITFG +D+KELIS L DS+ +CSIISSYK+D  DS+CPSRVRAMLASRACR 
Sbjct: 802  KAVPFSKNITFGVQDMKELISMLTDSQGDCSIISSYKMDKTDSVCPSRVRAMLASRACRM 861

Query: 2196 SVMIGDSLTKSEMQKIVNNLSKLKS 2270
            S MIGD LTK+EM+KI+ NL+ L+S
Sbjct: 862  STMIGDPLTKAEMKKILKNLTGLRS 886


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