BLASTX nr result
ID: Dioscorea21_contig00006627
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00006627
(2117 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putativ... 627 e-177
gb|ABK92556.1| unknown [Populus trichocarpa] 624 e-176
ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 622 e-175
ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 617 e-174
ref|NP_195217.1| DEAD-box ATP-dependent RNA helicase 16 [Arabido... 603 e-170
>ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223529859|gb|EEF31791.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 616
Score = 627 bits (1618), Expect = e-177
Identities = 336/545 (61%), Positives = 410/545 (75%), Gaps = 6/545 (1%)
Frame = +2
Query: 203 RLIRALKKK--SINKPSPIQREGIPLILEGKDVVARAKTGSGKTYAYLLPMLQKLFSEIG 376
RLIRAL KK SI KP+PIQR IPLILEGKDVVARAKTGSGKT AYLLP+LQKLFS+ G
Sbjct: 46 RLIRALNKKEISIRKPTPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQKLFSDSG 105
Query: 377 LKKS-APSAFILVPTRELCQQVYSVALSLLEFCRVQLKVAQVTTDMPMPDMSAALAGPPD 553
KK APSAFILVP+ ELCQQVY +L+++C+VQLK Q+T+ M D+ A+AGPPD
Sbjct: 106 SKKKLAPSAFILVPSGELCQQVYKEVSALIDWCKVQLKAVQLTSKMSGSDLRTAIAGPPD 165
Query: 554 LLVSTPACISTCISKGVLAKAAIQESLSMLVLDEADLLLDYGYKEDLEGLKNHISRRCQC 733
+L+S+PA ++ C+S G+L A+I +SL +LVLDEADLLL +GY++DL L I RRCQC
Sbjct: 166 ILISSPASLAKCLSVGLLQSASINDSLEILVLDEADLLLSFGYEDDLRALTALIPRRCQC 225
Query: 734 LLMSATLSPDVEILKKLVLHNPVTLTLSEADGSNDQLIPKSVQQFLISCSSRDKXXXXXX 913
LLMSAT S DV+ LKKL+LHNP LTL E +G+ D+ IPK+VQQF ISCS RDK
Sbjct: 226 LLMSATSSDDVDKLKKLMLHNPYILTLPEVEGNKDEAIPKNVQQFWISCSGRDKLVHILA 285
Query: 914 XXXXEVVQKKVLIFVNTIDMGYRMKLFLEQFGIKSAILNAELPHNSRDHILHEFNIGLFD 1093
++VQKKVLIF N+IDM +R++LFLE+FGIKSAILNAELP NSR HIL EFN GLFD
Sbjct: 286 LLKLDLVQKKVLIFTNSIDMSFRLRLFLEKFGIKSAILNAELPQNSRLHILEEFNAGLFD 345
Query: 1094 YLIATDDSHLKE---EQANREXXXXXXXXXXFRQRLDSEFGVVRGIDFKNVFTVLNFDMP 1264
YLIATDDS KE EQA+R +Q+LDSEFGVVRGIDFKNV TV+N+DMP
Sbjct: 346 YLIATDDSETKEKEQEQADRNLAQSRKSKKS-KQKLDSEFGVVRGIDFKNVHTVVNYDMP 404
Query: 1265 QSPAGYIHRIGRTGRQRNTGASISLVSPEETGVLEGIKQLLGEDDNQDSESCIAPFPLLT 1444
+ AGY+HRIGRTGR N+G+S+SLVSP+E +LE +K LG+D+N+DS + IAPFPLLT
Sbjct: 405 LNAAGYVHRIGRTGRGYNSGSSVSLVSPDEMEILEDVKSFLGDDENKDS-NIIAPFPLLT 463
Query: 1445 KNAVEALRYRAEDVAKGVTKVAIRESRARDLRDELTNSEKLKAHFEXXXXXXXXXXXXXX 1624
KNAVE+LRYRAEDVAK VTK+A++E+RA+DLR+E+ NSEKLKAHFE
Sbjct: 464 KNAVESLRYRAEDVAKSVTKIAVKEARAQDLRNEILNSEKLKAHFEANPRDLDLLKHDKV 523
Query: 1625 XXXXPPPAHLSEVPVYLRDAATEEASKNVKLSRAAMGIDNLNKQXXXXXXXXXXXKNRDP 1804
PP HL +VP YL DA T+EASK VKL+RAAMG +N +++ K++DP
Sbjct: 524 LSKNPPAPHLRDVPDYLMDATTKEASKMVKLARAAMGKNNPSRR---QGSKKKFIKSKDP 580
Query: 1805 LKSFS 1819
LK+ S
Sbjct: 581 LKALS 585
>gb|ABK92556.1| unknown [Populus trichocarpa]
Length = 619
Score = 624 bits (1608), Expect = e-176
Identities = 335/547 (61%), Positives = 405/547 (74%), Gaps = 6/547 (1%)
Frame = +2
Query: 203 RLIRALKKK--SINKPSPIQREGIPLILEGKDVVARAKTGSGKTYAYLLPMLQKLFS--E 370
RLIRAL KK SI +P+PIQR IPLIL+GKDVVARAKTGSGKT AYLLP+LQKL S +
Sbjct: 48 RLIRALNKKEISIAEPTPIQRAAIPLILQGKDVVARAKTGSGKTLAYLLPLLQKLLSTAD 107
Query: 371 IGLKKSAPSAFILVPTRELCQQVYSVALSLLEFCRVQLKVAQVTTDMPMPDMSAALAGPP 550
KK +PSAFILVP+ ELCQQVY SL++ C+ QLKV Q+T++MP D+ ALAGPP
Sbjct: 108 SNRKKLSPSAFILVPSGELCQQVYKEVSSLIDSCKAQLKVVQLTSNMPASDLRNALAGPP 167
Query: 551 DLLVSTPACISTCISKGVLAKAAIQESLSMLVLDEADLLLDYGYKEDLEGLKNHISRRCQ 730
D+LVSTP+C++ +S GVL +I +SL +LVLDEADLLL +GY+EDL+ L + RRCQ
Sbjct: 168 DILVSTPSCVAKSLSVGVLKSESINDSLEILVLDEADLLLSFGYEEDLKALTALVPRRCQ 227
Query: 731 CLLMSATLSPDVEILKKLVLHNPVTLTLSEADGSNDQLIPKSVQQFLISCSSRDKXXXXX 910
CLLMSAT S DV+ LKKLVLHNP LTL E +G D++IPK+VQQF +SC RDK
Sbjct: 228 CLLMSATSSADVDKLKKLVLHNPYVLTLPEVEGVKDEVIPKNVQQFWVSCGDRDKLVHIL 287
Query: 911 XXXXXEVVQKKVLIFVNTIDMGYRMKLFLEQFGIKSAILNAELPHNSRDHILHEFNIGLF 1090
++VQKKVLIF N IDM +R+KLFLE+FGIKSA+LNAELP NSR HIL EFN GLF
Sbjct: 288 ALLKLDLVQKKVLIFTNAIDMSFRLKLFLEKFGIKSAVLNAELPQNSRLHILEEFNAGLF 347
Query: 1091 DYLIATDDSHLKE-EQANR-EXXXXXXXXXXFRQRLDSEFGVVRGIDFKNVFTVLNFDMP 1264
DYLIATDD KE E+AN +Q+LDSEFGVVRGIDFKNV TV+N+DMP
Sbjct: 348 DYLIATDDRETKEKEKANEGSLAETRKSKKHAKQKLDSEFGVVRGIDFKNVHTVINYDMP 407
Query: 1265 QSPAGYIHRIGRTGRQRNTGASISLVSPEETGVLEGIKQLLGEDDNQDSESCIAPFPLLT 1444
S GY+HRIGRTGR +TG+S+SLVSP+E +LE IK LG+D+N +S + I+P+PLLT
Sbjct: 408 LSATGYVHRIGRTGRAYSTGSSVSLVSPDEMEILEEIKSFLGDDENNES-NVISPYPLLT 466
Query: 1445 KNAVEALRYRAEDVAKGVTKVAIRESRARDLRDELTNSEKLKAHFEXXXXXXXXXXXXXX 1624
KNAVE+LRYRAED AK VTK+A+RE+RA+DLR+E+ NSEKLKAHFE
Sbjct: 467 KNAVESLRYRAEDTAKSVTKIAVREARAQDLRNEILNSEKLKAHFEVNPRDLDLLKHDKV 526
Query: 1625 XXXXPPPAHLSEVPVYLRDAATEEASKNVKLSRAAMGIDNLNKQXXXXXXXXXXXKNRDP 1804
PP HLS+VP YL DA T+EASK VKL+RAAMG +N ++ K++DP
Sbjct: 527 LSKKPPAPHLSDVPDYLLDATTKEASKMVKLARAAMGNNNSGRR---QGPKRNFRKSKDP 583
Query: 1805 LKSFSAE 1825
LKSFSAE
Sbjct: 584 LKSFSAE 590
>ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
sativus] gi|449508529|ref|XP_004163338.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
sativus]
Length = 596
Score = 622 bits (1604), Expect = e-175
Identities = 338/544 (62%), Positives = 394/544 (72%), Gaps = 3/544 (0%)
Frame = +2
Query: 203 RLIRALKKKSINKPSPIQREGIPLILEGKDVVARAKTGSGKTYAYLLPMLQKLFSEIGLK 382
RL+RAL KK I KP+PIQ IPLILEGKDVVARAKTGSGKT+AYLLP+LQKLF+ K
Sbjct: 31 RLVRALIKKEIQKPTPIQHVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQKLFTGSSTK 90
Query: 383 K-SAPSAFILVPTRELCQQVYSVALSLLEFCRVQLKVAQVTTDMPMPDMSAALAGPPDLL 559
K S PSA +LVPTREL QQVY SL+E CRVQ+KVAQ+T+ M D+ ALAGPPD++
Sbjct: 91 KKSGPSAVVLVPTRELSQQVYKEISSLIETCRVQVKVAQLTSSMSHSDLRTALAGPPDII 150
Query: 560 VSTPACISTCISKGVLAKAAIQESLSMLVLDEADLLLDYGYKEDLEGLKNHISRRCQCLL 739
V+TPACI C+S GVL +I ESL +LVLDEADLLL YGY++D++ H+ R CQCLL
Sbjct: 151 VATPACIPKCLSAGVLQPTSINESLEILVLDEADLLLSYGYEDDIKAFAAHVPRSCQCLL 210
Query: 740 MSATLSPDVEILKKLVLHNPVTLTLSEADGSNDQLIPKSVQQFLISCSSRDKXXXXXXXX 919
MSAT S DVE LKKL+LHNP LTL E D LIPK+VQQF ISC +RDK
Sbjct: 211 MSATSSEDVEKLKKLILHNPFILTLPEVGDVKDDLIPKNVQQFSISCDARDKLLHILSLL 270
Query: 920 XXEVVQKKVLIFVNTIDMGYRMKLFLEQFGIKSAILNAELPHNSRDHILHEFNIGLFDYL 1099
++VQKKVLIF N+IDMG+R+KLFLE+FGIKSAILNAELP NSR HIL EFN GLFDYL
Sbjct: 271 KLDLVQKKVLIFTNSIDMGFRLKLFLEKFGIKSAILNAELPQNSRLHILEEFNAGLFDYL 330
Query: 1100 IATDDSHLKEEQANRE-XXXXXXXXXXFRQRLDSEFGVVRGIDFKNVFTVLNFDMPQSPA 1276
IATDDS KE++AN E +Q++DSEFGVVRGIDFKNV+TV+NF++P S +
Sbjct: 331 IATDDSQTKEKEANEEGNVDKRKSRKRAKQKIDSEFGVVRGIDFKNVYTVINFELPPSAS 390
Query: 1277 GYIHRIGRTGRQRNTGASISLVSPEETGVLEGIKQLLGEDDNQDSESCIAPFPLLTKNAV 1456
GYIHRIGRTGR NTGASISLVSP+E E I+ L D + D I PFPLLTKNAV
Sbjct: 391 GYIHRIGRTGRAYNTGASISLVSPDEMDNFEEIQSFLRADGDTD---IIVPFPLLTKNAV 447
Query: 1457 EALRYRAEDVAKGVTKVAIRESRARDLRDELTNSEKLKAHFEXXXXXXXXXXXXXXXXXX 1636
E+LRYRAEDV+K VTK+AIRESRA DLR+E+ NSEKLKAHFE
Sbjct: 448 ESLRYRAEDVSKSVTKLAIRESRALDLRNEILNSEKLKAHFESNPKDLDLLKHDKILSKN 507
Query: 1637 PPPAHLSEVPVYLRDAATEEASKNVKLSRAAMGIDNLNKQXXXXXXXXXXXKN-RDPLKS 1813
PP HL +VP YL D T+EASK +KL+RAAMG N Q +N +DPLK+
Sbjct: 508 PPAPHLRDVPDYLVDPVTQEASKIIKLARAAMG----NVQSGRRRGFKRKSRNDKDPLKT 563
Query: 1814 FSAE 1825
FSAE
Sbjct: 564 FSAE 567
>ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 16, partial [Vitis
vinifera]
Length = 545
Score = 617 bits (1590), Expect = e-174
Identities = 331/518 (63%), Positives = 389/518 (75%), Gaps = 3/518 (0%)
Frame = +2
Query: 281 EGKDVVARAKTGSGKTYAYLLPMLQKLFSEIGLK-KSAPSAFILVPTRELCQQVYSVALS 457
EGKDVVARAKTGSGKT+AYLLP+LQKLFSE + K APSAF+LVPTRELCQQVYS LS
Sbjct: 3 EGKDVVARAKTGSGKTFAYLLPLLQKLFSESESRNKLAPSAFVLVPTRELCQQVYSEVLS 62
Query: 458 LLEFCRVQLKVAQVTTDMPMPDMSAALAGPPDLLVSTPACISTCISKGVLAKAAIQESLS 637
L+E CR QLKV Q+T+ M D+ ALAGPPD+LVSTP CI C+S GVL A+I ESL
Sbjct: 63 LIELCRGQLKVVQLTSSMSPSDLRVALAGPPDILVSTPGCIPKCLSAGVLQAASINESLE 122
Query: 638 MLVLDEADLLLDYGYKEDLEGLKNHISRRCQCLLMSATLSPDVEILKKLVLHNPVTLTLS 817
+LVLDEADLLL YGY++DL+ L H+ RRCQCLLMSAT S DVE LKKL+LHNP LTL
Sbjct: 123 ILVLDEADLLLSYGYEDDLKALTAHVPRRCQCLLMSATSSADVEKLKKLILHNPFILTLP 182
Query: 818 EADGSNDQLIPKSVQQFLISCSSRDKXXXXXXXXXXEVVQKKVLIFVNTIDMGYRMKLFL 997
E D++IPK+VQQF ISCS+RDK E+VQKK+LIF N+IDM +R+KLFL
Sbjct: 183 EVGDGKDEIIPKNVQQFWISCSARDKLLYILALLKLELVQKKILIFTNSIDMAFRLKLFL 242
Query: 998 EQFGIKSAILNAELPHNSRDHILHEFNIGLFDYLIATDDSHLKE-EQANR-EXXXXXXXX 1171
E+FGIKSA+LNAELP NSR HIL EFN GLFDYLIATD S KE EQA+
Sbjct: 243 EKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDGSQPKEKEQADEGSQIEPRKSR 302
Query: 1172 XXFRQRLDSEFGVVRGIDFKNVFTVLNFDMPQSPAGYIHRIGRTGRQRNTGASISLVSPE 1351
+Q+LDSEFGVVRGIDFKNV TV+NF+MPQ+ GY+HRIGRTGR NTGAS+SLVSP+
Sbjct: 303 KHSKQKLDSEFGVVRGIDFKNVHTVINFEMPQNAPGYVHRIGRTGRAYNTGASVSLVSPD 362
Query: 1352 ETGVLEGIKQLLGEDDNQDSESCIAPFPLLTKNAVEALRYRAEDVAKGVTKVAIRESRAR 1531
E +LE IK +LG+D+N++S + IAPFPLLTKNAVE+LRYRAEDV+K VTK+A+RESRA+
Sbjct: 363 EMEILEEIKSILGDDENKES-NFIAPFPLLTKNAVESLRYRAEDVSKSVTKLAVRESRAQ 421
Query: 1532 DLRDELTNSEKLKAHFEXXXXXXXXXXXXXXXXXXPPPAHLSEVPVYLRDAATEEASKNV 1711
DLR+E+ NSEKLKAHFE P P HL +VP YL D T+EASK V
Sbjct: 422 DLRNEIVNSEKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIV 481
Query: 1712 KLSRAAMGIDNLNKQXXXXXXXXXXXKNRDPLKSFSAE 1825
KL+RAAMG N ++ K+RDPLK+FSAE
Sbjct: 482 KLARAAMGNTNPARR---QGSRRKFRKSRDPLKTFSAE 516
>ref|NP_195217.1| DEAD-box ATP-dependent RNA helicase 16 [Arabidopsis thaliana]
gi|75337761|sp|Q9SW44.1|RH16_ARATH RecName: Full=DEAD-box
ATP-dependent RNA helicase 16 gi|5123708|emb|CAB45452.1|
RNA helicase (RH16) [Arabidopsis thaliana]
gi|7270442|emb|CAB80208.1| RNA helicase (RH16)
[Arabidopsis thaliana] gi|27754373|gb|AAO22635.1|
putative DEAD/DEAH box RNA helicase protein [Arabidopsis
thaliana] gi|28394057|gb|AAO42436.1| putative DEAD/DEAH
box RNA helicase protein [Arabidopsis thaliana]
gi|332661036|gb|AEE86436.1| DEAD-box ATP-dependent RNA
helicase 16 [Arabidopsis thaliana]
Length = 626
Score = 603 bits (1555), Expect = e-170
Identities = 330/556 (59%), Positives = 393/556 (70%), Gaps = 16/556 (2%)
Frame = +2
Query: 200 ARLIRALKKKSINKPSPIQREGIPLILEGKDVVARAKTGSGKTYAYLLPMLQKLFS--EI 373
+RLIRAL KK I KP+ IQ+ IP ILEGKDVVARAKTGSGKT AYLLP+LQKLFS +
Sbjct: 55 SRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFSADSV 114
Query: 374 GLKKSAPSAFILVPTRELCQQVYSVALSLLEFCRVQLKVAQVTTDMPMPDMSAALAGPPD 553
KK APSAFILVP+RELCQQVY+ SL+E CRVQLK Q+T+ M DM ALAG P+
Sbjct: 115 SKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMRNALAGLPE 174
Query: 554 LLVSTPACISTCISKGVLAKAAIQESLSMLVLDEADLLLDYGYKEDLEGLKNHISRRCQC 733
+LVSTPACI C + GVL A+ ESLS+LVLDEADLLL YGY+++L + + I RRCQC
Sbjct: 175 ILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVTSIIPRRCQC 234
Query: 734 LLMSATLSPDVEILKKLVLHNPVTLTLSEADGSNDQLIPKSVQQFLISCSSRDKXXXXXX 913
LLMSAT S DVE LKKL+LHNP+ LTL+E D ++ +P +VQQF ISCS++DK
Sbjct: 235 LLMSATTSSDVEKLKKLILHNPIVLTLTE-DNDKEEAVPSNVQQFWISCSAQDKLLHILA 293
Query: 914 XXXXEVVQKKVLIFVNTIDMGYRMKLFLEQFGIKSAILNAELPHNSRDHILHEFNIGLFD 1093
EVVQKK+LIF+NTIDMG+R+KLFLE+FGIKSAILN ELP NSR HIL +FN GLFD
Sbjct: 294 LLKLEVVQKKILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQNSRLHILEQFNAGLFD 353
Query: 1094 YLIATDDS----HLKEEQANREXXXXXXXXXXFRQRLDSEFGVVRGIDFKNVFTVLNFDM 1261
YLIATDD+ KEE + +LD+EFGVVRGIDFK V TV+NFDM
Sbjct: 354 YLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKKVHTVINFDM 413
Query: 1262 PQSPAGYIHRIGRTGRQRNTGASISLVSPEETGVLEGIKQLLGEDDNQDSESCIAPFPLL 1441
PQS GYIHRIGRTGR ++G+S+SL+SP+E E IK L D N+D + I PFPLL
Sbjct: 414 PQSVTGYIHRIGRTGRAYSSGSSVSLISPDEMEGFEDIKSFLASDKNKDID-IITPFPLL 472
Query: 1442 TKNAVEALRYRAEDVAKGVTKVAIRESRARDLRDELTNSEKLKAHFEXXXXXXXXXXXXX 1621
T+NAVE+LRYRAEDVAK VTK+A+RESRA+DLR+E+ NSEKLKAHFE
Sbjct: 473 TENAVESLRYRAEDVAKSVTKIAVRESRAQDLRNEIINSEKLKAHFEANPRDLDLLRHDK 532
Query: 1622 XXXXXPPPAHLSEVPVYLRDAATEEASKNVKLSRAAM----------GIDNLNKQXXXXX 1771
P HL ++P YL DA T+EASK VKL+RAAM G +N NK+
Sbjct: 533 PLSKTAPAPHLKDIPEYLVDAKTQEASKMVKLARAAMGNTRRSGGGGGRNNKNKK----- 587
Query: 1772 XXXXXXKNRDPLKSFS 1819
K DPLK+F+
Sbjct: 588 ---RSRKGSDPLKTFN 600