BLASTX nr result

ID: Dioscorea21_contig00006624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006624
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138718.1| PREDICTED: protein MEMO1-like [Cucumis sativ...   117   1e-24
ref|XP_002285449.2| PREDICTED: protein MEMO1-like [Vitis vinifer...   116   2e-24
gb|ABR18230.1| unknown [Picea sitchensis]                             112   3e-23
ref|XP_002324881.1| predicted protein [Populus trichocarpa] gi|1...   112   4e-23
ref|XP_002880669.1| predicted protein [Arabidopsis lyrata subsp....   111   5e-23

>ref|XP_004138718.1| PREDICTED: protein MEMO1-like [Cucumis sativus]
           gi|449493342|ref|XP_004159261.1| PREDICTED: protein
           MEMO1-like [Cucumis sativus]
          Length = 291

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/64 (84%), Positives = 60/64 (93%)
 Frame = -3

Query: 244 RMGMDIIETGDADAFKKYLKEYDNTICGRHPISVFLHMLKNSATKININFLQYEQSSQCR 65
           RMGMDIIETGDA+AFKKYL+EYDNTICGRHPISVFLHMLK+S+TKI I FL+YEQSSQC+
Sbjct: 214 RMGMDIIETGDAEAFKKYLQEYDNTICGRHPISVFLHMLKHSSTKIKIKFLRYEQSSQCK 273

Query: 64  NMRD 53
             RD
Sbjct: 274 TTRD 277


>ref|XP_002285449.2| PREDICTED: protein MEMO1-like [Vitis vinifera]
           gi|296082111|emb|CBI21116.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/64 (82%), Positives = 59/64 (92%)
 Frame = -3

Query: 244 RMGMDIIETGDADAFKKYLKEYDNTICGRHPISVFLHMLKNSATKININFLQYEQSSQCR 65
           RMGMDIIETGD DAFK+YL E+DNTICGRHPISVFLHML+N +TKI INFL+YEQSSQC+
Sbjct: 214 RMGMDIIETGDPDAFKRYLLEFDNTICGRHPISVFLHMLRNCSTKIKINFLRYEQSSQCK 273

Query: 64  NMRD 53
            MRD
Sbjct: 274 TMRD 277


>gb|ABR18230.1| unknown [Picea sitchensis]
          Length = 291

 Score =  112 bits (280), Expect = 3e-23
 Identities = 51/64 (79%), Positives = 57/64 (89%)
 Frame = -3

Query: 244 RMGMDIIETGDADAFKKYLKEYDNTICGRHPISVFLHMLKNSATKININFLQYEQSSQCR 65
           R GMDIIE+GDAD+FK YL EYDNTICGRHPISVFLHMLKN   ++ I+FLQYEQSSQCR
Sbjct: 214 RKGMDIIESGDADSFKDYLLEYDNTICGRHPISVFLHMLKNCGVRVKISFLQYEQSSQCR 273

Query: 64  NMRD 53
           +MRD
Sbjct: 274 SMRD 277


>ref|XP_002324881.1| predicted protein [Populus trichocarpa] gi|118483368|gb|ABK93585.1|
           unknown [Populus trichocarpa]
           gi|222866315|gb|EEF03446.1| predicted protein [Populus
           trichocarpa]
          Length = 291

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/64 (79%), Positives = 57/64 (89%)
 Frame = -3

Query: 244 RMGMDIIETGDADAFKKYLKEYDNTICGRHPISVFLHMLKNSATKININFLQYEQSSQCR 65
           +MGMDIIETG+ADAFK+YL EYDNTICGRHPISVFLHM  N +TKI I FL+YEQSSQC+
Sbjct: 214 KMGMDIIETGNADAFKQYLSEYDNTICGRHPISVFLHMSSNCSTKIKIKFLRYEQSSQCK 273

Query: 64  NMRD 53
            MRD
Sbjct: 274 TMRD 277


>ref|XP_002880669.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326508|gb|EFH56928.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 291

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/64 (78%), Positives = 59/64 (92%)
 Frame = -3

Query: 244 RMGMDIIETGDADAFKKYLKEYDNTICGRHPISVFLHMLKNSATKININFLQYEQSSQCR 65
           + GMDIIETGD DAFKKYL E++NTICGRHPIS+FLHMLK+S++KI INFL+YEQSSQC+
Sbjct: 214 KKGMDIIETGDPDAFKKYLLEFENTICGRHPISIFLHMLKHSSSKIKINFLRYEQSSQCQ 273

Query: 64  NMRD 53
            MRD
Sbjct: 274 TMRD 277


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