BLASTX nr result

ID: Dioscorea21_contig00006622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006622
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17596.3| unnamed protein product [Vitis vinifera]              141   6e-32
ref|XP_002316180.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
gb|AFK42835.1| unknown [Lotus japonicus]                              137   9e-31
ref|XP_003631881.1| PREDICTED: 60S ribosomal protein L38-like [V...   137   9e-31
ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [G...   137   9e-31

>emb|CBI17596.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score =  141 bits (355), Expect = 6e-32
 Identities = 70/72 (97%), Positives = 71/72 (98%)
 Frame = -1

Query: 216 SSKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDPEKADKLK 37
           +SKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKADKLK
Sbjct: 56  NSKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLK 115

Query: 36  QSLPPGLSVQDL 1
           QSLPPGLSVQDL
Sbjct: 116 QSLPPGLSVQDL 127


>ref|XP_002316180.1| predicted protein [Populus trichocarpa]
           gi|224133246|ref|XP_002327996.1| predicted protein
           [Populus trichocarpa] gi|356512333|ref|XP_003524874.1|
           PREDICTED: 60S ribosomal protein L38-like [Glycine max]
           gi|356525108|ref|XP_003531169.1| PREDICTED: 60S
           ribosomal protein L38-like [Glycine max]
           gi|356549134|ref|XP_003542952.1| PREDICTED: 60S
           ribosomal protein L38 [Glycine max]
           gi|356555492|ref|XP_003546065.1| PREDICTED: 60S
           ribosomal protein L38-like [Glycine max]
           gi|118482000|gb|ABK92931.1| unknown [Populus
           trichocarpa] gi|118483885|gb|ABK93833.1| unknown
           [Populus trichocarpa] gi|222837405|gb|EEE75784.1|
           predicted protein [Populus trichocarpa]
           gi|222865220|gb|EEF02351.1| predicted protein [Populus
           trichocarpa] gi|255626373|gb|ACU13531.1| unknown
           [Glycine max]
          Length = 69

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/69 (98%), Positives = 69/69 (100%)
 Frame = -1

Query: 207 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 28
           MPKQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFDPEKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60

Query: 27  PPGLSVQDL 1
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69


>gb|AFK42835.1| unknown [Lotus japonicus]
          Length = 69

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/69 (98%), Positives = 68/69 (98%)
 Frame = -1

Query: 207 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 28
           MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDTEKADKLKQSL 60

Query: 27  PPGLSVQDL 1
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69


>ref|XP_003631881.1| PREDICTED: 60S ribosomal protein L38-like [Vitis vinifera]
           gi|449442271|ref|XP_004138905.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
           gi|449454586|ref|XP_004145035.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
           gi|449506284|ref|XP_004162704.1| PREDICTED: 60S
           ribosomal protein L38-like [Cucumis sativus]
          Length = 69

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/69 (98%), Positives = 68/69 (98%)
 Frame = -1

Query: 207 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 28
           MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKADKLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 27  PPGLSVQDL 1
           PPGLSVQDL
Sbjct: 61  PPGLSVQDL 69


>ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [Glycine max]
          Length = 100

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/71 (95%), Positives = 69/71 (97%)
 Frame = -1

Query: 213 SKMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDPEKADKLKQ 34
           S MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKADKLKQ
Sbjct: 30  STMPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQ 89

Query: 33  SLPPGLSVQDL 1
           SLPPGLSVQD+
Sbjct: 90  SLPPGLSVQDV 100


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