BLASTX nr result

ID: Dioscorea21_contig00006542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00006542
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002461027.1| hypothetical protein SORBIDRAFT_02g039433 [S...    56   4e-06
ref|XP_003589215.1| Calcium-binding protein [Medicago truncatula...    55   6e-06

>ref|XP_002461027.1| hypothetical protein SORBIDRAFT_02g039433 [Sorghum bicolor]
           gi|241924404|gb|EER97548.1| hypothetical protein
           SORBIDRAFT_02g039433 [Sorghum bicolor]
          Length = 108

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/77 (40%), Positives = 47/77 (61%)
 Frame = -3

Query: 291 VDRFRQWLTKEVDRNHDGRISILELRSALKRKGYDWATWKGIMGVVCNDLNHNGFIDTEE 112
           V  F++W+ K+ D +HDGRIS  ELR A++R+G  ++  + +  V   D N NGF+D + 
Sbjct: 31  VPEFKRWV-KQFDTDHDGRISRKELREAIRRRGAWFSGLRALFAVRRADRNRNGFVD-DS 88

Query: 111 ETLALANYAVRAWGFTI 61
           E   L ++A R  GF I
Sbjct: 89  EIEGLIDFAERELGFRI 105


>ref|XP_003589215.1| Calcium-binding protein [Medicago truncatula]
           gi|355478263|gb|AES59466.1| Calcium-binding protein
           [Medicago truncatula]
          Length = 222

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/69 (43%), Positives = 43/69 (62%)
 Frame = -3

Query: 291 VDRFRQWLTKEVDRNHDGRISILELRSALKRKGYDWATWKGIMGVVCNDLNHNGFIDTEE 112
           + +F+QWL    D N DGRIS  ELR  L+  G  +A+WK    +   D NH+GFID ++
Sbjct: 145 LQQFKQWLKTSFDTNGDGRISKDELREVLRITGGLFASWKSNKVLKSVDANHDGFID-DK 203

Query: 111 ETLALANYA 85
           E + LA++A
Sbjct: 204 EFINLAHFA 212


Top